RNA–Protein interactions for RNA: ENST00000416774.1

LINC01342-201, Transcript of long intergenic non-protein coding RNA 1342, humanhuman

TSL 1 (best) BASIC

Gene LINC01342, Length 1,620 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01342-201ENST00000416774 NISCHQ9Y2I1 1504 aa52.52■■■■■ 6
LINC01342-201ENST00000416774 CCDC180Q9P1Z9 1646 aa46.29■■■■■ 5
LINC01342-201ENST00000416774 ABCC9O60706 1549 aa45.16■■■■■ 4.82
LINC01342-201ENST00000416774 ZCCHC6Q5VYS8 1495 aaKnown RBP44.21■■■■■ 4.67
LINC01342-201ENST00000416774 DCAF8L2P0C7V8 631 aa43.7■■■■■ 4.59
LINC01342-201ENST00000416774 DCAF1Q9Y4B6 1507 aa43.55■■■■■ 4.56
LINC01342-201ENST00000416774 NACADO15069 1562 aa43.49■■■■■ 4.55
LINC01342-201ENST00000416774 RB1CC1Q8TDY2 1594 aa43.49■■■■■ 4.55
LINC01342-201ENST00000416774 MYO15BQ96JP2 1530 aa43.28■■■■■ 4.52
LINC01342-201ENST00000416774 SHROOM4Q9ULL8 1493 aa42.9■■■■■ 4.46
LINC01342-201ENST00000416774 UNC13AQ9UPW8 1703 aa42.47■■■■■ 4.39
LINC01342-201ENST00000416774 SCRIBQ14160 1630 aa42.34■■■■■ 4.37
LINC01342-201ENST00000416774 PABPN1Q86U42 306 aaKnown RBP eCLIP42.3■■■■■ 4.36
LINC01342-201ENST00000416774 BICRAQ9NZM4 1560 aa42.17■■■■■ 4.34
LINC01342-201ENST00000416774 SUPT5HO00267 1087 aaKnown RBP41.52■■■■■ 4.24
LINC01342-201ENST00000416774 DNAJC5BQ9UF47 199 aa41.26■■■■■ 4.19
LINC01342-201ENST00000416774 EIF4G1Q04637 1599 aaKnown RBP41.04■■■■■ 4.16
LINC01342-201ENST00000416774 RSF1Q96T23 1441 aaPredicted RBP40.86■■■■■ 4.13
LINC01342-201ENST00000416774 CC2D2AQ9P2K1 1620 aa40.82■■■■■ 4.13
LINC01342-201ENST00000416774 CECR2Q9BXF3 1484 aa40.73■■■■■ 4.11
LINC01342-201ENST00000416774 BAZ1AQ9NRL2 1556 aaPredicted RBP40.55■■■■■ 4.08
LINC01342-201ENST00000416774 MROH2BQ7Z745 1585 aa40.53■■■■■ 4.08
LINC01342-201ENST00000416774 SMARCA4P51532 1647 aa40.49■■■■■ 4.07
LINC01342-201ENST00000416774 ATAD2BQ9ULI0 1458 aa40.23■■■■■ 4.03
LINC01342-201ENST00000416774 WIZO95785 1651 aa40.22■■■■■ 4.03
LINC01342-201ENST00000416774 SMARCA2P51531 1590 aa40.16■■■■■ 4.02
LINC01342-201ENST00000416774 NCAPD3P42695 1498 aa40.14■■■■■ 4.02
LINC01342-201ENST00000416774 CHIC1Q5VXU3 224 aa40.08■■■■■ 4.01
LINC01342-201ENST00000416774 PEG3Q9GZU2 1588 aa40.05■■■■■ 4
LINC01342-201ENST00000416774 HMGXB3Q12766 1538 aa39.95■■■■□ 3.99
LINC01342-201ENST00000416774 BAZ1BQ9UIG0 1483 aaKnown RBP39.91■■■■□ 3.98
LINC01342-201ENST00000416774 TOP2AP11388 1531 aaKnown RBP39.89■■■■□ 3.98
LINC01342-201ENST00000416774 CCDC88BA6NC98 1476 aa39.44■■■■□ 3.9
LINC01342-201ENST00000416774 NESP48681 1621 aa39.15■■■■□ 3.86
LINC01342-201ENST00000416774 TRIM41Q8WV44 630 aa39.11■■■■□ 3.85
LINC01342-201ENST00000416774 LAMC3Q9Y6N6 1575 aa39.03■■■■□ 3.84
LINC01342-201ENST00000416774 CADPSQ9ULU8 1353 aa39.02■■■■□ 3.84
LINC01342-201ENST00000416774 ERCC6Q03468 1493 aa38.9■■■■□ 3.82
LINC01342-201ENST00000416774 CFTRP13569 1480 aa38.82■■■■□ 3.81
LINC01342-201ENST00000416774 PDS5BQ9NTI5 1447 aa38.8■■■■□ 3.8
LINC01342-201ENST00000416774 ABCC8Q09428 1581 aa38.67■■■■□ 3.78
LINC01342-201ENST00000416774 KIF21AQ7Z4S6 1674 aa38.65■■■■□ 3.78
LINC01342-201ENST00000416774 FANCD2Q9BXW9 1451 aa38.57■■■■□ 3.77
LINC01342-201ENST00000416774 CEP164Q9UPV0 1460 aa38.49■■■■□ 3.75
LINC01342-201ENST00000416774 PRDM2Q13029 1718 aa38.47■■■■□ 3.75
LINC01342-201ENST00000416774 WRNQ14191 1432 aaPredicted RBP eCLIP38.46■■■■□ 3.75
LINC01342-201ENST00000416774 LOC105371045A0A1W2PR82 267 aa38.45■■■■□ 3.75
LINC01342-201ENST00000416774 THOC2Q8NI27 1593 aaKnown RBP38.44■■■■□ 3.74
LINC01342-201ENST00000416774 MRC2Q9UBG0 1479 aa38.37■■■■□ 3.73
LINC01342-201ENST00000416774 CUX2O14529 1486 aa38.34■■■■□ 3.73
LINC01342-201ENST00000416774 FAM9AQ8IZU1 332 aaPredicted RBP38.27■■■■□ 3.72
LINC01342-201ENST00000416774 SYNJ1O43426 1573 aa38.25■■■■□ 3.71
LINC01342-201ENST00000416774 EEA1Q15075 1411 aa38.25■■■■□ 3.71
LINC01342-201ENST00000416774 WDR62O43379 1518 aa38.22■■■■□ 3.71
LINC01342-201ENST00000416774 URB2Q14146 1524 aaKnown RBP38.17■■■■□ 3.7
LINC01342-201ENST00000416774 TOP2BQ02880 1626 aa38.14■■■■□ 3.7
LINC01342-201ENST00000416774 BIVM-ERCC5R4GMW8 1640 aa38.13■■■■□ 3.69
LINC01342-201ENST00000416774 SOGA1O94964 1423 aa38.04■■■■□ 3.68
LINC01342-201ENST00000416774 TOPBP1Q92547 1522 aa37.98■■■■□ 3.67
LINC01342-201ENST00000416774 DNMBPQ6XZF7 1577 aa37.93■■■■□ 3.66
LINC01342-201ENST00000416774 CUX1P39880 1505 aa37.88■■■■□ 3.66
LINC01342-201ENST00000416774 CSRNP3Q8WYN3 585 aa37.88■■■■□ 3.65
LINC01342-201ENST00000416774 RUSC2Q8N2Y8 1516 aa37.86■■■■□ 3.65
LINC01342-201ENST00000416774 KIF21BO75037 1637 aa37.68■■■■□ 3.62
LINC01342-201ENST00000416774 POLA1P09884 1462 aaPredicted RBP37.67■■■■□ 3.62
LINC01342-201ENST00000416774 IFT140Q96RY7 1462 aa37.66■■■■□ 3.62
LINC01342-201ENST00000416774 GOLGA3Q08378 1498 aa37.65■■■■□ 3.62
LINC01342-201ENST00000416774 TNIKQ9UKE5 1360 aa37.64■■■■□ 3.62
LINC01342-201ENST00000416774 FGD5Q6ZNL6 1462 aa37.63■■■■□ 3.61
LINC01342-201ENST00000416774 EHMT2Q96KQ7 1210 aa37.59■■■■□ 3.61
LINC01342-201ENST00000416774 RAD54L2Q9Y4B4 1467 aa37.54■■■■□ 3.6
LINC01342-201ENST00000416774 TARBP1Q13395 1621 aaKnown RBP37.52■■■■□ 3.6
LINC01342-201ENST00000416774 ZNF608Q9ULD9 1512 aaPredicted RBP37.51■■■■□ 3.6
LINC01342-201ENST00000416774 KIF27Q86VH2 1401 aa37.48■■■■□ 3.59
LINC01342-201ENST00000416774 CEP162Q5TB80 1403 aa37.38■■■■□ 3.57
LINC01342-201ENST00000416774 ERICH3Q5RHP9 1530 aa37.37■■■■□ 3.57
LINC01342-201ENST00000416774 UBTFP17480 764 aaKnown RBP37.36■■■■□ 3.57
LINC01342-201ENST00000416774 AQRO60306 1485 aaKnown RBP eCLIP37.34■■■■□ 3.57
LINC01342-201ENST00000416774 PRXQ9BXM0 1461 aa37.34■■■■□ 3.57
LINC01342-201ENST00000416774 EIF4G3O43432 1585 aaKnown RBP37.33■■■■□ 3.57
LINC01342-201ENST00000416774 TDRD9Q8NDG6 1382 aaKnown RBP37.32■■■■□ 3.57
LINC01342-201ENST00000416774 RAPGEF2Q9Y4G8 1499 aa37.27■■■■□ 3.56
LINC01342-201ENST00000416774 ABCA10Q8WWZ4 1543 aa37.25■■■■□ 3.55
LINC01342-201ENST00000416774 WDR97A6NE52 1622 aa37.25■■■■□ 3.55
LINC01342-201ENST00000416774 TRIM26Q12899 539 aaPredicted RBP37.18■■■■□ 3.54
LINC01342-201ENST00000416774 PCGF6Q9BYE7 350 aa37.14■■■■□ 3.54
LINC01342-201ENST00000416774 GAPVD1Q14C86 1478 aa37.11■■■■□ 3.53
LINC01342-201ENST00000416774 IGF1RP08069 1367 aa37.08■■■■□ 3.53
LINC01342-201ENST00000416774 ABCA5Q8WWZ7 1642 aa37.07■■■■□ 3.52
LINC01342-201ENST00000416774 GRIN2BQ13224 1484 aa37.06■■■■□ 3.52
LINC01342-201ENST00000416774 CLIP1P30622 1438 aa37.02■■■■□ 3.52
LINC01342-201ENST00000416774 SNAPC4Q5SXM2 1469 aa36.98■■■■□ 3.51
LINC01342-201ENST00000416774 PBRM1Q86U86 1689 aa36.96■■■■□ 3.51
LINC01342-201ENST00000416774 DNAJC5Q9H3Z4 198 aa36.92■■■■□ 3.5
LINC01342-201ENST00000416774 MAGI1Q96QZ7 1491 aaPredicted RBP36.91■■■■□ 3.5
LINC01342-201ENST00000416774 CARMIL1Q5VZK9 1371 aa36.9■■■■□ 3.5
LINC01342-201ENST00000416774 FBLN2P98095 1184 aa36.9■■■■□ 3.5
LINC01342-201ENST00000416774 OSCARQ8IYS5 282 aa36.88■■■■□ 3.49
LINC01342-201ENST00000416774 CUL7Q14999 1698 aa36.84■■■■□ 3.49
LINC01342-201ENST00000416774 CHMP7Q8WUX9 453 aaPredicted RBP36.81■■■■□ 3.48
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms