RNA–Protein interactions for RNA: ENST00000301039.6

PROCA1-201, Transcript of protein interacting with cyclin A1, humanhuman

TSL 1 (best) BASIC

Gene PROCA1, Length 1,566 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PROCA1-201ENST00000301039 NISCHQ9Y2I1 1504 aa59.29■■■■■ 7.08
PROCA1-201ENST00000301039 CCDC180Q9P1Z9 1646 aa52.41■■■■■ 5.98
PROCA1-201ENST00000301039 ABCC9O60706 1549 aa50.98■■■■■ 5.75
PROCA1-201ENST00000301039 ZCCHC6Q5VYS8 1495 aaKnown RBP49.49■■■■■ 5.51
PROCA1-201ENST00000301039 DCAF8L2P0C7V8 631 aa49.41■■■■■ 5.5
PROCA1-201ENST00000301039 NACADO15069 1562 aa49.2■■■■■ 5.47
PROCA1-201ENST00000301039 RB1CC1Q8TDY2 1594 aa49.14■■■■■ 5.46
PROCA1-201ENST00000301039 MYO15BQ96JP2 1530 aa49.04■■■■■ 5.44
PROCA1-201ENST00000301039 DCAF1Q9Y4B6 1507 aa49.01■■■■■ 5.44
PROCA1-201ENST00000301039 UNC13AQ9UPW8 1703 aa48.08■■■■■ 5.29
PROCA1-201ENST00000301039 SCRIBQ14160 1630 aa47.97■■■■■ 5.27
PROCA1-201ENST00000301039 PABPN1Q86U42 306 aaKnown RBP eCLIP47.76■■■■■ 5.24
PROCA1-201ENST00000301039 BICRAQ9NZM4 1560 aa47.73■■■■■ 5.23
PROCA1-201ENST00000301039 SHROOM4Q9ULL8 1493 aa47.21■■■■■ 5.15
PROCA1-201ENST00000301039 DNAJC5BQ9UF47 199 aa46.47■■■■■ 5.03
PROCA1-201ENST00000301039 EIF4G1Q04637 1599 aaKnown RBP46.4■■■■■ 5.02
PROCA1-201ENST00000301039 CECR2Q9BXF3 1484 aa46.21■■■■■ 4.99
PROCA1-201ENST00000301039 CC2D2AQ9P2K1 1620 aa46.1■■■■■ 4.97
PROCA1-201ENST00000301039 SMARCA4P51532 1647 aa45.9■■■■■ 4.94
PROCA1-201ENST00000301039 BAZ1AQ9NRL2 1556 aaPredicted RBP45.88■■■■■ 4.94
PROCA1-201ENST00000301039 MROH2BQ7Z745 1585 aa45.75■■■■■ 4.91
PROCA1-201ENST00000301039 ATAD2BQ9ULI0 1458 aa45.55■■■■■ 4.88
PROCA1-201ENST00000301039 SMARCA2P51531 1590 aa45.45■■■■■ 4.87
PROCA1-201ENST00000301039 NCAPD3P42695 1498 aa45.44■■■■■ 4.86
PROCA1-201ENST00000301039 PEG3Q9GZU2 1588 aa45.42■■■■■ 4.86
PROCA1-201ENST00000301039 RSF1Q96T23 1441 aaPredicted RBP45.39■■■■■ 4.86
PROCA1-201ENST00000301039 WIZO95785 1651 aa45.26■■■■■ 4.84
PROCA1-201ENST00000301039 HMGXB3Q12766 1538 aa45.22■■■■■ 4.83
PROCA1-201ENST00000301039 BAZ1BQ9UIG0 1483 aaKnown RBP45.18■■■■■ 4.82
PROCA1-201ENST00000301039 TOP2AP11388 1531 aaKnown RBP44.76■■■■■ 4.76
PROCA1-201ENST00000301039 SUPT5HO00267 1087 aaKnown RBP44.62■■■■■ 4.73
PROCA1-201ENST00000301039 CCDC88BA6NC98 1476 aa44.29■■■■■ 4.68
PROCA1-201ENST00000301039 NESP48681 1621 aa44.28■■■■■ 4.68
PROCA1-201ENST00000301039 CADPSQ9ULU8 1353 aa44.15■■■■■ 4.66
PROCA1-201ENST00000301039 LAMC3Q9Y6N6 1575 aa44.12■■■■■ 4.65
PROCA1-201ENST00000301039 CFTRP13569 1480 aa43.99■■■■■ 4.63
PROCA1-201ENST00000301039 ERCC6Q03468 1493 aa43.84■■■■■ 4.61
PROCA1-201ENST00000301039 PDS5BQ9NTI5 1447 aa43.81■■■■■ 4.6
PROCA1-201ENST00000301039 KIF21AQ7Z4S6 1674 aa43.71■■■■■ 4.59
PROCA1-201ENST00000301039 FANCD2Q9BXW9 1451 aa43.64■■■■■ 4.58
PROCA1-201ENST00000301039 PRDM2Q13029 1718 aa43.6■■■■■ 4.57
PROCA1-201ENST00000301039 CEP164Q9UPV0 1460 aa43.52■■■■■ 4.56
PROCA1-201ENST00000301039 THOC2Q8NI27 1593 aaKnown RBP43.44■■■■■ 4.54
PROCA1-201ENST00000301039 MRC2Q9UBG0 1479 aa43.36■■■■■ 4.53
PROCA1-201ENST00000301039 WDR62O43379 1518 aa43.21■■■■■ 4.51
PROCA1-201ENST00000301039 URB2Q14146 1524 aaKnown RBP43.21■■■■■ 4.51
PROCA1-201ENST00000301039 CUX2O14529 1486 aa43.18■■■■■ 4.5
PROCA1-201ENST00000301039 TOPBP1Q92547 1522 aa43■■■■■ 4.47
PROCA1-201ENST00000301039 DNMBPQ6XZF7 1577 aa42.96■■■■■ 4.47
PROCA1-201ENST00000301039 ABCC8Q09428 1581 aa42.93■■■■■ 4.46
PROCA1-201ENST00000301039 CUX1P39880 1505 aa42.88■■■■■ 4.45
PROCA1-201ENST00000301039 WRNQ14191 1432 aaPredicted RBP eCLIP42.74■■■■■ 4.43
PROCA1-201ENST00000301039 POLA1P09884 1462 aaPredicted RBP42.69■■■■■ 4.42
PROCA1-201ENST00000301039 SYNJ1O43426 1573 aa42.65■■■■■ 4.42
PROCA1-201ENST00000301039 FGD5Q6ZNL6 1462 aa42.64■■■■■ 4.42
PROCA1-201ENST00000301039 TOP2BQ02880 1626 aa42.59■■■■■ 4.41
PROCA1-201ENST00000301039 IFT140Q96RY7 1462 aa42.57■■■■■ 4.41
PROCA1-201ENST00000301039 BIVM-ERCC5R4GMW8 1640 aa42.56■■■■■ 4.4
PROCA1-201ENST00000301039 RAD54L2Q9Y4B4 1467 aa42.53■■■■■ 4.4
PROCA1-201ENST00000301039 TARBP1Q13395 1621 aaKnown RBP42.5■■■■■ 4.39
PROCA1-201ENST00000301039 SOGA1O94964 1423 aa42.5■■■■■ 4.39
PROCA1-201ENST00000301039 ZNF608Q9ULD9 1512 aaPredicted RBP42.44■■■■■ 4.38
PROCA1-201ENST00000301039 TDRD9Q8NDG6 1382 aaKnown RBP42.25■■■■■ 4.35
PROCA1-201ENST00000301039 AQRO60306 1485 aaKnown RBP eCLIP42.25■■■■■ 4.35
PROCA1-201ENST00000301039 WDR97A6NE52 1622 aa42.23■■■■■ 4.35
PROCA1-201ENST00000301039 EIF4G3O43432 1585 aaKnown RBP42.23■■■■■ 4.35
PROCA1-201ENST00000301039 ABCA10Q8WWZ4 1543 aa42.23■■■■■ 4.35
PROCA1-201ENST00000301039 TRIM41Q8WV44 630 aa42.07■■■■■ 4.33
PROCA1-201ENST00000301039 ABCA5Q8WWZ7 1642 aa42.02■■■■■ 4.32
PROCA1-201ENST00000301039 GAPVD1Q14C86 1478 aa42.01■■■■■ 4.32
PROCA1-201ENST00000301039 GRIN2BQ13224 1484 aa41.92■■■■■ 4.3
PROCA1-201ENST00000301039 CHIC1Q5VXU3 224 aa41.91■■■■■ 4.3
PROCA1-201ENST00000301039 PBRM1Q86U86 1689 aa41.86■■■■■ 4.29
PROCA1-201ENST00000301039 SNAPC4Q5SXM2 1469 aa41.84■■■■■ 4.29
PROCA1-201ENST00000301039 KIF27Q86VH2 1401 aa41.79■■■■■ 4.28
PROCA1-201ENST00000301039 MAGI1Q96QZ7 1491 aaPredicted RBP41.75■■■■■ 4.27
PROCA1-201ENST00000301039 ERICH3Q5RHP9 1530 aa41.7■■■■■ 4.27
PROCA1-201ENST00000301039 RUSC2Q8N2Y8 1516 aa41.67■■■■■ 4.26
PROCA1-201ENST00000301039 FBLN2P98095 1184 aa41.63■■■■■ 4.26
PROCA1-201ENST00000301039 IGF1RP08069 1367 aa41.62■■■■■ 4.25
PROCA1-201ENST00000301039 SYNJ2O15056 1496 aa41.6■■■■■ 4.25
PROCA1-201ENST00000301039 CHD1O14646 1710 aa41.6■■■■■ 4.25
PROCA1-201ENST00000301039 ADAMTS12P58397 1594 aa41.58■■■■■ 4.25
PROCA1-201ENST00000301039 CHMP7Q8WUX9 453 aaPredicted RBP41.56■■■■■ 4.24
PROCA1-201ENST00000301039 FHAD1B1AJZ9 1412 aa41.52■■■■■ 4.24
PROCA1-201ENST00000301039 OSCARQ8IYS5 282 aa41.52■■■■■ 4.24
PROCA1-201ENST00000301039 GRIN2AQ12879 1464 aa41.4■■■■■ 4.22
PROCA1-201ENST00000301039 CUL7Q14999 1698 aa41.38■■■■■ 4.22
PROCA1-201ENST00000301039 DNAJC5Q9H3Z4 198 aa41.38■■■■■ 4.22
PROCA1-201ENST00000301039 CARMIL1Q5VZK9 1371 aa41.35■■■■■ 4.21
PROCA1-201ENST00000301039 FAM9AQ8IZU1 332 aaPredicted RBP41.25■■■■■ 4.19
PROCA1-201ENST00000301039 EEA1Q15075 1411 aa41.24■■■■■ 4.19
PROCA1-201ENST00000301039 CSRNP3Q8WYN3 585 aa41.21■■■■■ 4.19
PROCA1-201ENST00000301039 CEP170Q5SW79 1584 aa41.2■■■■■ 4.19
PROCA1-201ENST00000301039 NUP160Q12769 1436 aa41.2■■■■■ 4.19
PROCA1-201ENST00000301039 CLASP1Q7Z460 1538 aa41.16■■■■■ 4.18
PROCA1-201ENST00000301039 PRXQ9BXM0 1461 aa41.15■■■■■ 4.18
PROCA1-201ENST00000301039 RAPGEF2Q9Y4G8 1499 aa41.14■■■■■ 4.18
PROCA1-201ENST00000301039 KIAA0586Q9BVV6 1533 aa40.91■■■■■ 4.14
PROCA1-201ENST00000301039 ARHGEF11O15085 1522 aa40.87■■■■■ 4.13
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms