RNA–Protein interactions for RNA: ENST00000315965.6

CCDC71L-201, Transcript of coiled-coil domain containing 71 like, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CCDC71L, Length 1,575 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC71L-201ENST00000315965 NISCHQ9Y2I1 1504 aa56.05■■■■■ 6.56
CCDC71L-201ENST00000315965 CCDC180Q9P1Z9 1646 aa49.31■■■■■ 5.48
CCDC71L-201ENST00000315965 ABCC9O60706 1549 aa47.15■■■■■ 5.14
CCDC71L-201ENST00000315965 ZCCHC6Q5VYS8 1495 aaKnown RBP46.95■■■■■ 5.11
CCDC71L-201ENST00000315965 DCAF8L2P0C7V8 631 aa46.43■■■■■ 5.02
CCDC71L-201ENST00000315965 DCAF1Q9Y4B6 1507 aa46.42■■■■■ 5.02
CCDC71L-201ENST00000315965 MYO15BQ96JP2 1530 aa46.18■■■■■ 4.98
CCDC71L-201ENST00000315965 NACADO15069 1562 aa46.09■■■■■ 4.97
CCDC71L-201ENST00000315965 RB1CC1Q8TDY2 1594 aa45.86■■■■■ 4.93
CCDC71L-201ENST00000315965 SCRIBQ14160 1630 aa45.13■■■■■ 4.81
CCDC71L-201ENST00000315965 SHROOM4Q9ULL8 1493 aa45.06■■■■■ 4.8
CCDC71L-201ENST00000315965 UNC13AQ9UPW8 1703 aa44.86■■■■■ 4.77
CCDC71L-201ENST00000315965 BICRAQ9NZM4 1560 aa44.41■■■■■ 4.7
CCDC71L-201ENST00000315965 PABPN1Q86U42 306 aaKnown RBP eCLIP44.27■■■■■ 4.68
CCDC71L-201ENST00000315965 CECR2Q9BXF3 1484 aa43.54■■■■■ 4.56
CCDC71L-201ENST00000315965 BAZ1AQ9NRL2 1556 aaPredicted RBP43.38■■■■■ 4.54
CCDC71L-201ENST00000315965 SMARCA4P51532 1647 aa43.26■■■■■ 4.52
CCDC71L-201ENST00000315965 MROH2BQ7Z745 1585 aa43.23■■■■■ 4.51
CCDC71L-201ENST00000315965 EIF4G1Q04637 1599 aaKnown RBP43.17■■■■■ 4.5
CCDC71L-201ENST00000315965 RSF1Q96T23 1441 aaPredicted RBP43.16■■■■■ 4.5
CCDC71L-201ENST00000315965 SUPT5HO00267 1087 aaKnown RBP43.01■■■■■ 4.48
CCDC71L-201ENST00000315965 WIZO95785 1651 aa42.84■■■■■ 4.45
CCDC71L-201ENST00000315965 PEG3Q9GZU2 1588 aa42.8■■■■■ 4.44
CCDC71L-201ENST00000315965 SMARCA2P51531 1590 aa42.73■■■■■ 4.43
CCDC71L-201ENST00000315965 ATAD2BQ9ULI0 1458 aa42.71■■■■■ 4.43
CCDC71L-201ENST00000315965 CC2D2AQ9P2K1 1620 aa42.7■■■■■ 4.43
CCDC71L-201ENST00000315965 NCAPD3P42695 1498 aa42.5■■■■■ 4.39
CCDC71L-201ENST00000315965 BAZ1BQ9UIG0 1483 aaKnown RBP42.45■■■■■ 4.39
CCDC71L-201ENST00000315965 TOP2AP11388 1531 aaKnown RBP42.44■■■■■ 4.38
CCDC71L-201ENST00000315965 HMGXB3Q12766 1538 aa42.41■■■■■ 4.38
CCDC71L-201ENST00000315965 DNAJC5BQ9UF47 199 aa42.18■■■■■ 4.34
CCDC71L-201ENST00000315965 CCDC88BA6NC98 1476 aa41.94■■■■■ 4.31
CCDC71L-201ENST00000315965 CADPSQ9ULU8 1353 aa41.35■■■■■ 4.21
CCDC71L-201ENST00000315965 CFTRP13569 1480 aa41.34■■■■■ 4.21
CCDC71L-201ENST00000315965 LAMC3Q9Y6N6 1575 aa41.21■■■■■ 4.19
CCDC71L-201ENST00000315965 PRDM2Q13029 1718 aa41.15■■■■■ 4.18
CCDC71L-201ENST00000315965 NESP48681 1621 aa41.15■■■■■ 4.18
CCDC71L-201ENST00000315965 PDS5BQ9NTI5 1447 aa40.9■■■■■ 4.14
CCDC71L-201ENST00000315965 FANCD2Q9BXW9 1451 aa40.88■■■■■ 4.13
CCDC71L-201ENST00000315965 CHIC1Q5VXU3 224 aa40.81■■■■■ 4.12
CCDC71L-201ENST00000315965 ABCC8Q09428 1581 aa40.78■■■■■ 4.12
CCDC71L-201ENST00000315965 CEP164Q9UPV0 1460 aa40.72■■■■■ 4.11
CCDC71L-201ENST00000315965 KIF21AQ7Z4S6 1674 aa40.71■■■■■ 4.11
CCDC71L-201ENST00000315965 WRNQ14191 1432 aaPredicted RBP eCLIP40.68■■■■■ 4.1
CCDC71L-201ENST00000315965 ERCC6Q03468 1493 aa40.57■■■■■ 4.08
CCDC71L-201ENST00000315965 TRIM41Q8WV44 630 aa40.56■■■■■ 4.08
CCDC71L-201ENST00000315965 SYNJ1O43426 1573 aa40.51■■■■■ 4.08
CCDC71L-201ENST00000315965 CUX1P39880 1505 aa40.48■■■■■ 4.07
CCDC71L-201ENST00000315965 TOP2BQ02880 1626 aa40.46■■■■■ 4.07
CCDC71L-201ENST00000315965 BIVM-ERCC5R4GMW8 1640 aa40.44■■■■■ 4.06
CCDC71L-201ENST00000315965 DNMBPQ6XZF7 1577 aa40.41■■■■■ 4.06
CCDC71L-201ENST00000315965 MRC2Q9UBG0 1479 aa40.4■■■■■ 4.06
CCDC71L-201ENST00000315965 URB2Q14146 1524 aaKnown RBP40.39■■■■■ 4.06
CCDC71L-201ENST00000315965 TOPBP1Q92547 1522 aa40.35■■■■■ 4.05
CCDC71L-201ENST00000315965 THOC2Q8NI27 1593 aaKnown RBP40.25■■■■■ 4.03
CCDC71L-201ENST00000315965 WDR62O43379 1518 aa40.23■■■■■ 4.03
CCDC71L-201ENST00000315965 FGD5Q6ZNL6 1462 aa40.17■■■■■ 4.02
CCDC71L-201ENST00000315965 POLA1P09884 1462 aaPredicted RBP40.1■■■■■ 4.01
CCDC71L-201ENST00000315965 SOGA1O94964 1423 aa39.95■■■■□ 3.99
CCDC71L-201ENST00000315965 RAD54L2Q9Y4B4 1467 aa39.91■■■■□ 3.98
CCDC71L-201ENST00000315965 CUX2O14529 1486 aa39.88■■■■□ 3.97
CCDC71L-201ENST00000315965 ABCA10Q8WWZ4 1543 aa39.83■■■■□ 3.97
CCDC71L-201ENST00000315965 TARBP1Q13395 1621 aaKnown RBP39.81■■■■□ 3.96
CCDC71L-201ENST00000315965 IFT140Q96RY7 1462 aa39.81■■■■□ 3.96
CCDC71L-201ENST00000315965 WDR97A6NE52 1622 aa39.77■■■■□ 3.96
CCDC71L-201ENST00000315965 EEA1Q15075 1411 aa39.76■■■■□ 3.96
CCDC71L-201ENST00000315965 KIF27Q86VH2 1401 aa39.74■■■■□ 3.95
CCDC71L-201ENST00000315965 RUSC2Q8N2Y8 1516 aa39.73■■■■□ 3.95
CCDC71L-201ENST00000315965 FAM9AQ8IZU1 332 aaPredicted RBP39.71■■■■□ 3.95
CCDC71L-201ENST00000315965 TDRD9Q8NDG6 1382 aaKnown RBP39.59■■■■□ 3.93
CCDC71L-201ENST00000315965 ABCA5Q8WWZ7 1642 aa39.57■■■■□ 3.93
CCDC71L-201ENST00000315965 CSRNP3Q8WYN3 585 aa39.54■■■■□ 3.92
CCDC71L-201ENST00000315965 ZNF608Q9ULD9 1512 aaPredicted RBP39.53■■■■□ 3.92
CCDC71L-201ENST00000315965 GAPVD1Q14C86 1478 aa39.52■■■■□ 3.92
CCDC71L-201ENST00000315965 AQRO60306 1485 aaKnown RBP eCLIP39.46■■■■□ 3.91
CCDC71L-201ENST00000315965 EIF4G3O43432 1585 aaKnown RBP39.43■■■■□ 3.9
CCDC71L-201ENST00000315965 IGF1RP08069 1367 aa39.42■■■■□ 3.9
CCDC71L-201ENST00000315965 ERICH3Q5RHP9 1530 aa39.38■■■■□ 3.9
CCDC71L-201ENST00000315965 PBRM1Q86U86 1689 aa39.37■■■■□ 3.89
CCDC71L-201ENST00000315965 GRIN2BQ13224 1484 aa39.35■■■■□ 3.89
CCDC71L-201ENST00000315965 CUL7Q14999 1698 aa39.26■■■■□ 3.88
CCDC71L-201ENST00000315965 KIF21BO75037 1637 aa39.26■■■■□ 3.88
CCDC71L-201ENST00000315965 PRXQ9BXM0 1461 aa39.26■■■■□ 3.87
CCDC71L-201ENST00000315965 CARMIL1Q5VZK9 1371 aa39.23■■■■□ 3.87
CCDC71L-201ENST00000315965 LOC105371045A0A1W2PR82 267 aa39.16■■■■□ 3.86
CCDC71L-201ENST00000315965 GOLGA3Q08378 1498 aa39.14■■■■□ 3.86
CCDC71L-201ENST00000315965 SNAPC4Q5SXM2 1469 aa39.13■■■■□ 3.85
CCDC71L-201ENST00000315965 RAPGEF2Q9Y4G8 1499 aa39.12■■■■□ 3.85
CCDC71L-201ENST00000315965 MAGI1Q96QZ7 1491 aaPredicted RBP39.12■■■■□ 3.85
CCDC71L-201ENST00000315965 EHMT2Q96KQ7 1210 aa39.11■■■■□ 3.85
CCDC71L-201ENST00000315965 ADAMTS12P58397 1594 aa39.1■■■■□ 3.85
CCDC71L-201ENST00000315965 FHAD1B1AJZ9 1412 aa39.1■■■■□ 3.85
CCDC71L-201ENST00000315965 UBTFP17480 764 aaKnown RBP38.95■■■■□ 3.83
CCDC71L-201ENST00000315965 SYNJ2O15056 1496 aa38.95■■■■□ 3.83
CCDC71L-201ENST00000315965 CHMP7Q8WUX9 453 aaPredicted RBP38.87■■■■□ 3.81
CCDC71L-201ENST00000315965 TNIKQ9UKE5 1360 aa38.85■■■■□ 3.81
CCDC71L-201ENST00000315965 GRIN2AQ12879 1464 aa38.84■■■■□ 3.81
CCDC71L-201ENST00000315965 FBLN2P98095 1184 aa38.8■■■■□ 3.8
CCDC71L-201ENST00000315965 CHD1O14646 1710 aa38.72■■■■□ 3.79
CCDC71L-201ENST00000315965 CTTNBP2Q8WZ74 1663 aa38.7■■■■□ 3.79
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms