RNA–Protein interactions for RNA: ENST00000369215.4

PRDM13-202, Transcript of PR/SET domain 13, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRDM13, Length 2,429 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM13-202ENST00000369215 NISCHQ9Y2I1 1504 aa51.91■■■■■ 5.9
PRDM13-202ENST00000369215 CCDC180Q9P1Z9 1646 aa44.95■■■■■ 4.79
PRDM13-202ENST00000369215 ZCCHC6Q5VYS8 1495 aaKnown RBP43.73■■■■■ 4.59
PRDM13-202ENST00000369215 SHROOM4Q9ULL8 1493 aa42.91■■■■■ 4.46
PRDM13-202ENST00000369215 DCAF1Q9Y4B6 1507 aa42.87■■■■■ 4.45
PRDM13-202ENST00000369215 DCAF8L2P0C7V8 631 aa42.79■■■■■ 4.44
PRDM13-202ENST00000369215 MYO15BQ96JP2 1530 aa42.12■■■■■ 4.33
PRDM13-202ENST00000369215 ABCC9O60706 1549 aa42.06■■■■■ 4.32
PRDM13-202ENST00000369215 NACADO15069 1562 aa41.72■■■■■ 4.27
PRDM13-202ENST00000369215 SUPT5HO00267 1087 aaKnown RBP41.58■■■■■ 4.25
PRDM13-202ENST00000369215 SCRIBQ14160 1630 aa41.52■■■■■ 4.24
PRDM13-202ENST00000369215 RB1CC1Q8TDY2 1594 aa41.24■■■■■ 4.19
PRDM13-202ENST00000369215 RSF1Q96T23 1441 aaPredicted RBP40.53■■■■■ 4.08
PRDM13-202ENST00000369215 UNC13AQ9UPW8 1703 aa40.48■■■■■ 4.07
PRDM13-202ENST00000369215 CECR2Q9BXF3 1484 aa40.34■■■■■ 4.05
PRDM13-202ENST00000369215 MROH2BQ7Z745 1585 aa40.17■■■■■ 4.02
PRDM13-202ENST00000369215 CHIC1Q5VXU3 224 aa40.08■■■■■ 4.01
PRDM13-202ENST00000369215 BAZ1AQ9NRL2 1556 aaPredicted RBP40.03■■■■■ 4
PRDM13-202ENST00000369215 BICRAQ9NZM4 1560 aa40.01■■■■■ 4
PRDM13-202ENST00000369215 WIZO95785 1651 aa39.89■■■■□ 3.98
PRDM13-202ENST00000369215 PABPN1Q86U42 306 aaKnown RBP eCLIP39.81■■■■□ 3.96
PRDM13-202ENST00000369215 SMARCA4P51532 1647 aa39.79■■■■□ 3.96
PRDM13-202ENST00000369215 TOP2AP11388 1531 aaKnown RBP39.45■■■■□ 3.91
PRDM13-202ENST00000369215 PEG3Q9GZU2 1588 aa39.23■■■■□ 3.87
PRDM13-202ENST00000369215 SMARCA2P51531 1590 aa39.12■■■■□ 3.85
PRDM13-202ENST00000369215 CCDC88BA6NC98 1476 aa39.08■■■■□ 3.85
PRDM13-202ENST00000369215 EIF4G1Q04637 1599 aaKnown RBP39.04■■■■□ 3.84
PRDM13-202ENST00000369215 TRIM41Q8WV44 630 aa39■■■■□ 3.83
PRDM13-202ENST00000369215 ATAD2BQ9ULI0 1458 aa38.98■■■■□ 3.83
PRDM13-202ENST00000369215 BAZ1BQ9UIG0 1483 aaKnown RBP38.81■■■■□ 3.8
PRDM13-202ENST00000369215 LOC105371045A0A1W2PR82 267 aa38.62■■■■□ 3.77
PRDM13-202ENST00000369215 NCAPD3P42695 1498 aa38.51■■■■□ 3.76
PRDM13-202ENST00000369215 HMGXB3Q12766 1538 aa38.51■■■■□ 3.76
PRDM13-202ENST00000369215 ABCC8Q09428 1581 aa38.5■■■■□ 3.75
PRDM13-202ENST00000369215 FAM9AQ8IZU1 332 aaPredicted RBP38.37■■■■□ 3.73
PRDM13-202ENST00000369215 WRNQ14191 1432 aaPredicted RBP eCLIP38.14■■■■□ 3.7
PRDM13-202ENST00000369215 CC2D2AQ9P2K1 1620 aa38.04■■■■□ 3.68
PRDM13-202ENST00000369215 SYNJ1O43426 1573 aa37.97■■■■□ 3.67
PRDM13-202ENST00000369215 SOGA1O94964 1423 aa37.89■■■■□ 3.66
PRDM13-202ENST00000369215 EEA1Q15075 1411 aa37.88■■■■□ 3.65
PRDM13-202ENST00000369215 EHMT2Q96KQ7 1210 aa37.86■■■■□ 3.65
PRDM13-202ENST00000369215 CFTRP13569 1480 aa37.84■■■■□ 3.65
PRDM13-202ENST00000369215 TOP2BQ02880 1626 aa37.74■■■■□ 3.63
PRDM13-202ENST00000369215 RUSC2Q8N2Y8 1516 aa37.72■■■■□ 3.63
PRDM13-202ENST00000369215 PRDM2Q13029 1718 aa37.69■■■■□ 3.62
PRDM13-202ENST00000369215 BIVM-ERCC5R4GMW8 1640 aa37.69■■■■□ 3.62
PRDM13-202ENST00000369215 CSRNP3Q8WYN3 585 aa37.66■■■■□ 3.62
PRDM13-202ENST00000369215 CADPSQ9ULU8 1353 aa37.59■■■■□ 3.61
PRDM13-202ENST00000369215 CUX1P39880 1505 aa37.51■■■■□ 3.6
PRDM13-202ENST00000369215 PCGF6Q9BYE7 350 aa37.5■■■■□ 3.59
PRDM13-202ENST00000369215 GOLGA3Q08378 1498 aa37.42■■■■□ 3.58
PRDM13-202ENST00000369215 TNIKQ9UKE5 1360 aa37.42■■■■□ 3.58
PRDM13-202ENST00000369215 KIF21BO75037 1637 aa37.38■■■■□ 3.57
PRDM13-202ENST00000369215 HRCP23327 699 aa37.37■■■■□ 3.57
PRDM13-202ENST00000369215 CEP164Q9UPV0 1460 aa37.35■■■■□ 3.57
PRDM13-202ENST00000369215 TRIM26Q12899 539 aaPredicted RBP37.3■■■■□ 3.56
PRDM13-202ENST00000369215 CEP162Q5TB80 1403 aa37.29■■■■□ 3.56
PRDM13-202ENST00000369215 UBTFP17480 764 aaKnown RBP37.27■■■■□ 3.56
PRDM13-202ENST00000369215 FANCD2Q9BXW9 1451 aa37.2■■■■□ 3.55
PRDM13-202ENST00000369215 NESP48681 1621 aa37.12■■■■□ 3.53
PRDM13-202ENST00000369215 KIF27Q86VH2 1401 aa37.11■■■■□ 3.53
PRDM13-202ENST00000369215 LAMC3Q9Y6N6 1575 aa37.11■■■■□ 3.53
PRDM13-202ENST00000369215 RAPGEF2Q9Y4G8 1499 aa37.09■■■■□ 3.53
PRDM13-202ENST00000369215 FGD5Q6ZNL6 1462 aa37.01■■■■□ 3.52
PRDM13-202ENST00000369215 PRXQ9BXM0 1461 aa37.01■■■■□ 3.51
PRDM13-202ENST00000369215 ERICH3Q5RHP9 1530 aa37■■■■□ 3.51
PRDM13-202ENST00000369215 DNMBPQ6XZF7 1577 aa36.97■■■■□ 3.51
PRDM13-202ENST00000369215 DNAJC5BQ9UF47 199 aa36.95■■■■□ 3.51
PRDM13-202ENST00000369215 CUX2O14529 1486 aa36.9■■■■□ 3.5
PRDM13-202ENST00000369215 TOPBP1Q92547 1522 aa36.87■■■■□ 3.49
PRDM13-202ENST00000369215 CLIP1P30622 1438 aa36.86■■■■□ 3.49
PRDM13-202ENST00000369215 PDS5BQ9NTI5 1447 aa36.81■■■■□ 3.48
PRDM13-202ENST00000369215 PPARGC1BQ86YN6 1023 aaKnown RBP36.79■■■■□ 3.48
PRDM13-202ENST00000369215 POLA1P09884 1462 aaPredicted RBP36.74■■■■□ 3.47
PRDM13-202ENST00000369215 IGF1RP08069 1367 aa36.72■■■■□ 3.47
PRDM13-202ENST00000369215 URB2Q14146 1524 aaKnown RBP36.71■■■■□ 3.47
PRDM13-202ENST00000369215 ABCA10Q8WWZ4 1543 aa36.67■■■■□ 3.46
PRDM13-202ENST00000369215 KIF21AQ7Z4S6 1674 aa36.66■■■■□ 3.46
PRDM13-202ENST00000369215 RAD54L2Q9Y4B4 1467 aa36.65■■■■□ 3.46
PRDM13-202ENST00000369215 VPS8Q8N3P4 1428 aa36.61■■■■□ 3.45
PRDM13-202ENST00000369215 CARMIL1Q5VZK9 1371 aa36.56■■■■□ 3.44
PRDM13-202ENST00000369215 RANGAP1P46060 587 aaPredicted RBP36.54■■■■□ 3.44
PRDM13-202ENST00000369215 WDR97A6NE52 1622 aa36.5■■■■□ 3.43
PRDM13-202ENST00000369215 ARAP1Q96P48 1450 aa36.42■■■■□ 3.42
PRDM13-202ENST00000369215 TTBK1Q5TCY1 1321 aaPredicted RBP36.39■■■■□ 3.42
PRDM13-202ENST00000369215 CUL7Q14999 1698 aa36.37■■■■□ 3.41
PRDM13-202ENST00000369215 ABCA5Q8WWZ7 1642 aa36.33■■■■□ 3.41
PRDM13-202ENST00000369215 MRC2Q9UBG0 1479 aa36.32■■■■□ 3.4
PRDM13-202ENST00000369215 ARHGAP35Q9NRY4 1499 aa36.29■■■■□ 3.4
PRDM13-202ENST00000369215 APLP2Q06481 763 aa36.28■■■■□ 3.4
PRDM13-202ENST00000369215 TARBP1Q13395 1621 aaKnown RBP36.26■■■■□ 3.39
PRDM13-202ENST00000369215 TDRD9Q8NDG6 1382 aaKnown RBP36.24■■■■□ 3.39
PRDM13-202ENST00000369215 GAPVD1Q14C86 1478 aa36.23■■■■□ 3.39
PRDM13-202ENST00000369215 ZEB1P37275 1124 aaPredicted RBP36.1■■■■□ 3.37
PRDM13-202ENST00000369215 WDR62O43379 1518 aa36.09■■■■□ 3.37
PRDM13-202ENST00000369215 CTTNBP2Q8WZ74 1663 aa36.08■■■■□ 3.37
PRDM13-202ENST00000369215 PBRM1Q86U86 1689 aa36■■■■□ 3.35
PRDM13-202ENST00000369215 ERCC6Q03468 1493 aa35.98■■■■□ 3.35
PRDM13-202ENST00000369215 IFT140Q96RY7 1462 aa35.96■■■■□ 3.35
PRDM13-202ENST00000369215 EFCAB5A4FU69 1503 aa35.95■■■■□ 3.35
Retrieved 100 of 20,778 RNA–protein pairs in 230.7 ms