RNA–Protein interactions for RNA: ENST00000369215.4

PRDM13-202, Transcript of PR/SET domain 13, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRDM13, Length 2,429 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM13-202ENST00000369215 NISCHQ9Y2I1 1504 aa51.91■■■■■ 5.9
PRDM13-202ENST00000369215 CCDC180Q9P1Z9 1646 aa44.95■■■■■ 4.79
PRDM13-202ENST00000369215 ZCCHC6Q5VYS8 1495 aaKnown RBP43.73■■■■■ 4.59
PRDM13-202ENST00000369215 SHROOM4Q9ULL8 1493 aa42.91■■■■■ 4.46
PRDM13-202ENST00000369215 DCAF1Q9Y4B6 1507 aa42.87■■■■■ 4.45
PRDM13-202ENST00000369215 DCAF8L2P0C7V8 631 aa42.79■■■■■ 4.44
PRDM13-202ENST00000369215 MYO15BQ96JP2 1530 aa42.12■■■■■ 4.33
PRDM13-202ENST00000369215 ABCC9O60706 1549 aa42.06■■■■■ 4.32
PRDM13-202ENST00000369215 NACADO15069 1562 aa41.72■■■■■ 4.27
PRDM13-202ENST00000369215 SUPT5HO00267 1087 aaKnown RBP41.58■■■■■ 4.25
PRDM13-202ENST00000369215 SCRIBQ14160 1630 aa41.52■■■■■ 4.24
PRDM13-202ENST00000369215 RB1CC1Q8TDY2 1594 aa41.24■■■■■ 4.19
PRDM13-202ENST00000369215 RSF1Q96T23 1441 aaPredicted RBP40.53■■■■■ 4.08
PRDM13-202ENST00000369215 UNC13AQ9UPW8 1703 aa40.48■■■■■ 4.07
PRDM13-202ENST00000369215 CECR2Q9BXF3 1484 aa40.34■■■■■ 4.05
PRDM13-202ENST00000369215 MROH2BQ7Z745 1585 aa40.17■■■■■ 4.02
PRDM13-202ENST00000369215 CHIC1Q5VXU3 224 aa40.08■■■■■ 4.01
PRDM13-202ENST00000369215 BAZ1AQ9NRL2 1556 aaPredicted RBP40.03■■■■■ 4
PRDM13-202ENST00000369215 BICRAQ9NZM4 1560 aa40.01■■■■■ 4
PRDM13-202ENST00000369215 WIZO95785 1651 aa39.89■■■■□ 3.98
PRDM13-202ENST00000369215 PABPN1Q86U42 306 aaKnown RBP eCLIP39.81■■■■□ 3.96
PRDM13-202ENST00000369215 SMARCA4P51532 1647 aa39.79■■■■□ 3.96
PRDM13-202ENST00000369215 TOP2AP11388 1531 aaKnown RBP39.45■■■■□ 3.91
PRDM13-202ENST00000369215 PEG3Q9GZU2 1588 aa39.23■■■■□ 3.87
PRDM13-202ENST00000369215 SMARCA2P51531 1590 aa39.12■■■■□ 3.85
PRDM13-202ENST00000369215 CCDC88BA6NC98 1476 aa39.08■■■■□ 3.85
PRDM13-202ENST00000369215 EIF4G1Q04637 1599 aaKnown RBP39.04■■■■□ 3.84
PRDM13-202ENST00000369215 TRIM41Q8WV44 630 aa39■■■■□ 3.83
PRDM13-202ENST00000369215 ATAD2BQ9ULI0 1458 aa38.98■■■■□ 3.83
PRDM13-202ENST00000369215 BAZ1BQ9UIG0 1483 aaKnown RBP38.81■■■■□ 3.8
PRDM13-202ENST00000369215 LOC105371045A0A1W2PR82 267 aa38.62■■■■□ 3.77
PRDM13-202ENST00000369215 NCAPD3P42695 1498 aa38.51■■■■□ 3.76
PRDM13-202ENST00000369215 HMGXB3Q12766 1538 aa38.51■■■■□ 3.76
PRDM13-202ENST00000369215 ABCC8Q09428 1581 aa38.5■■■■□ 3.75
PRDM13-202ENST00000369215 FAM9AQ8IZU1 332 aaPredicted RBP38.37■■■■□ 3.73
PRDM13-202ENST00000369215 WRNQ14191 1432 aaPredicted RBP eCLIP38.14■■■■□ 3.7
PRDM13-202ENST00000369215 CC2D2AQ9P2K1 1620 aa38.04■■■■□ 3.68
PRDM13-202ENST00000369215 SYNJ1O43426 1573 aa37.97■■■■□ 3.67
PRDM13-202ENST00000369215 SOGA1O94964 1423 aa37.89■■■■□ 3.66
PRDM13-202ENST00000369215 EEA1Q15075 1411 aa37.88■■■■□ 3.65
PRDM13-202ENST00000369215 EHMT2Q96KQ7 1210 aa37.86■■■■□ 3.65
PRDM13-202ENST00000369215 CFTRP13569 1480 aa37.84■■■■□ 3.65
PRDM13-202ENST00000369215 TOP2BQ02880 1626 aa37.74■■■■□ 3.63
PRDM13-202ENST00000369215 RUSC2Q8N2Y8 1516 aa37.72■■■■□ 3.63
PRDM13-202ENST00000369215 PRDM2Q13029 1718 aa37.69■■■■□ 3.62
PRDM13-202ENST00000369215 BIVM-ERCC5R4GMW8 1640 aa37.69■■■■□ 3.62
PRDM13-202ENST00000369215 CSRNP3Q8WYN3 585 aa37.66■■■■□ 3.62
PRDM13-202ENST00000369215 CADPSQ9ULU8 1353 aa37.59■■■■□ 3.61
PRDM13-202ENST00000369215 CUX1P39880 1505 aa37.51■■■■□ 3.6
PRDM13-202ENST00000369215 PCGF6Q9BYE7 350 aa37.5■■■■□ 3.59
PRDM13-202ENST00000369215 GOLGA3Q08378 1498 aa37.42■■■■□ 3.58
PRDM13-202ENST00000369215 TNIKQ9UKE5 1360 aa37.42■■■■□ 3.58
PRDM13-202ENST00000369215 KIF21BO75037 1637 aa37.38■■■■□ 3.57
PRDM13-202ENST00000369215 HRCP23327 699 aa37.37■■■■□ 3.57
PRDM13-202ENST00000369215 CEP164Q9UPV0 1460 aa37.35■■■■□ 3.57
PRDM13-202ENST00000369215 TRIM26Q12899 539 aaPredicted RBP37.3■■■■□ 3.56
PRDM13-202ENST00000369215 CEP162Q5TB80 1403 aa37.29■■■■□ 3.56
PRDM13-202ENST00000369215 UBTFP17480 764 aaKnown RBP37.27■■■■□ 3.56
PRDM13-202ENST00000369215 FANCD2Q9BXW9 1451 aa37.2■■■■□ 3.55
PRDM13-202ENST00000369215 NESP48681 1621 aa37.12■■■■□ 3.53
PRDM13-202ENST00000369215 KIF27Q86VH2 1401 aa37.11■■■■□ 3.53
PRDM13-202ENST00000369215 LAMC3Q9Y6N6 1575 aa37.11■■■■□ 3.53
PRDM13-202ENST00000369215 RAPGEF2Q9Y4G8 1499 aa37.09■■■■□ 3.53
PRDM13-202ENST00000369215 FGD5Q6ZNL6 1462 aa37.01■■■■□ 3.52
PRDM13-202ENST00000369215 PRXQ9BXM0 1461 aa37.01■■■■□ 3.51
PRDM13-202ENST00000369215 ERICH3Q5RHP9 1530 aa37■■■■□ 3.51
PRDM13-202ENST00000369215 DNMBPQ6XZF7 1577 aa36.97■■■■□ 3.51
PRDM13-202ENST00000369215 DNAJC5BQ9UF47 199 aa36.95■■■■□ 3.51
PRDM13-202ENST00000369215 CUX2O14529 1486 aa36.9■■■■□ 3.5
PRDM13-202ENST00000369215 TOPBP1Q92547 1522 aa36.87■■■■□ 3.49
PRDM13-202ENST00000369215 CLIP1P30622 1438 aa36.86■■■■□ 3.49
PRDM13-202ENST00000369215 PDS5BQ9NTI5 1447 aa36.81■■■■□ 3.48
PRDM13-202ENST00000369215 PPARGC1BQ86YN6 1023 aaKnown RBP36.79■■■■□ 3.48
PRDM13-202ENST00000369215 POLA1P09884 1462 aaPredicted RBP36.74■■■■□ 3.47
PRDM13-202ENST00000369215 IGF1RP08069 1367 aa36.72■■■■□ 3.47
PRDM13-202ENST00000369215 URB2Q14146 1524 aaKnown RBP36.71■■■■□ 3.47
PRDM13-202ENST00000369215 ABCA10Q8WWZ4 1543 aa36.67■■■■□ 3.46
PRDM13-202ENST00000369215 KIF21AQ7Z4S6 1674 aa36.66■■■■□ 3.46
PRDM13-202ENST00000369215 RAD54L2Q9Y4B4 1467 aa36.65■■■■□ 3.46
PRDM13-202ENST00000369215 VPS8Q8N3P4 1428 aa36.61■■■■□ 3.45
PRDM13-202ENST00000369215 CARMIL1Q5VZK9 1371 aa36.56■■■■□ 3.44
PRDM13-202ENST00000369215 RANGAP1P46060 587 aaPredicted RBP36.54■■■■□ 3.44
PRDM13-202ENST00000369215 WDR97A6NE52 1622 aa36.5■■■■□ 3.43
PRDM13-202ENST00000369215 ARAP1Q96P48 1450 aa36.42■■■■□ 3.42
PRDM13-202ENST00000369215 TTBK1Q5TCY1 1321 aaPredicted RBP36.39■■■■□ 3.42
PRDM13-202ENST00000369215 CUL7Q14999 1698 aa36.37■■■■□ 3.41
PRDM13-202ENST00000369215 ABCA5Q8WWZ7 1642 aa36.33■■■■□ 3.41
PRDM13-202ENST00000369215 MRC2Q9UBG0 1479 aa36.32■■■■□ 3.4
PRDM13-202ENST00000369215 ARHGAP35Q9NRY4 1499 aa36.29■■■■□ 3.4
PRDM13-202ENST00000369215 APLP2Q06481 763 aa36.28■■■■□ 3.4
PRDM13-202ENST00000369215 TARBP1Q13395 1621 aaKnown RBP36.26■■■■□ 3.39
PRDM13-202ENST00000369215 TDRD9Q8NDG6 1382 aaKnown RBP36.24■■■■□ 3.39
PRDM13-202ENST00000369215 GAPVD1Q14C86 1478 aa36.23■■■■□ 3.39
PRDM13-202ENST00000369215 ZEB1P37275 1124 aaPredicted RBP36.1■■■■□ 3.37
PRDM13-202ENST00000369215 WDR62O43379 1518 aa36.09■■■■□ 3.37
PRDM13-202ENST00000369215 CTTNBP2Q8WZ74 1663 aa36.08■■■■□ 3.37
PRDM13-202ENST00000369215 PBRM1Q86U86 1689 aa36■■■■□ 3.35
PRDM13-202ENST00000369215 ERCC6Q03468 1493 aa35.98■■■■□ 3.35
PRDM13-202ENST00000369215 IFT140Q96RY7 1462 aa35.96■■■■□ 3.35
PRDM13-202ENST00000369215 EFCAB5A4FU69 1503 aa35.95■■■■□ 3.35
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms