RNA–Protein interactions for RNA: ENST00000640521.1

MED17-227, Transcript of mediator complex subunit 17, humanhuman

TSL 5 BASIC

Gene MED17, Length 2,047 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MED17-227ENST00000640521 NISCHQ9Y2I1 1504 aa51.68■■■■■ 5.86
MED17-227ENST00000640521 CCDC180Q9P1Z9 1646 aa44.61■■■■■ 4.73
MED17-227ENST00000640521 ZCCHC6Q5VYS8 1495 aaKnown RBP43.57■■■■■ 4.57
MED17-227ENST00000640521 SHROOM4Q9ULL8 1493 aa42.86■■■■■ 4.45
MED17-227ENST00000640521 DCAF1Q9Y4B6 1507 aa42.65■■■■■ 4.42
MED17-227ENST00000640521 DCAF8L2P0C7V8 631 aa42.52■■■■■ 4.4
MED17-227ENST00000640521 MYO15BQ96JP2 1530 aa41.82■■■■■ 4.28
MED17-227ENST00000640521 SUPT5HO00267 1087 aaKnown RBP41.62■■■■■ 4.25
MED17-227ENST00000640521 ABCC9O60706 1549 aa41.6■■■■■ 4.25
MED17-227ENST00000640521 NACADO15069 1562 aa41.37■■■■■ 4.21
MED17-227ENST00000640521 SCRIBQ14160 1630 aa41.27■■■■■ 4.2
MED17-227ENST00000640521 RB1CC1Q8TDY2 1594 aa40.83■■■■■ 4.13
MED17-227ENST00000640521 RSF1Q96T23 1441 aaPredicted RBP40.44■■■■■ 4.06
MED17-227ENST00000640521 CHIC1Q5VXU3 224 aa40.25■■■■■ 4.03
MED17-227ENST00000640521 CECR2Q9BXF3 1484 aa40.18■■■■■ 4.02
MED17-227ENST00000640521 UNC13AQ9UPW8 1703 aa40.17■■■■■ 4.02
MED17-227ENST00000640521 MROH2BQ7Z745 1585 aa40.02■■■■■ 4
MED17-227ENST00000640521 BAZ1AQ9NRL2 1556 aaPredicted RBP39.8■■■■□ 3.96
MED17-227ENST00000640521 WIZO95785 1651 aa39.76■■■■□ 3.95
MED17-227ENST00000640521 BICRAQ9NZM4 1560 aa39.7■■■■□ 3.95
MED17-227ENST00000640521 SMARCA4P51532 1647 aa39.57■■■■□ 3.92
MED17-227ENST00000640521 PABPN1Q86U42 306 aaKnown RBP eCLIP39.45■■■■□ 3.91
MED17-227ENST00000640521 TOP2AP11388 1531 aaKnown RBP39.27■■■■□ 3.88
MED17-227ENST00000640521 TRIM41Q8WV44 630 aa39.01■■■■□ 3.83
MED17-227ENST00000640521 PEG3Q9GZU2 1588 aa39■■■■□ 3.83
MED17-227ENST00000640521 EIF4G1Q04637 1599 aaKnown RBP39■■■■□ 3.83
MED17-227ENST00000640521 SMARCA2P51531 1590 aa38.98■■■■□ 3.83
MED17-227ENST00000640521 CCDC88BA6NC98 1476 aa38.95■■■■□ 3.83
MED17-227ENST00000640521 LOC105371045A0A1W2PR82 267 aa38.82■■■■□ 3.8
MED17-227ENST00000640521 ATAD2BQ9ULI0 1458 aa38.71■■■■□ 3.79
MED17-227ENST00000640521 BAZ1BQ9UIG0 1483 aaKnown RBP38.52■■■■□ 3.76
MED17-227ENST00000640521 ABCC8Q09428 1581 aa38.43■■■■□ 3.74
MED17-227ENST00000640521 FAM9AQ8IZU1 332 aaPredicted RBP38.41■■■■□ 3.74
MED17-227ENST00000640521 NCAPD3P42695 1498 aa38.21■■■■□ 3.71
MED17-227ENST00000640521 HMGXB3Q12766 1538 aa38.2■■■■□ 3.71
MED17-227ENST00000640521 WRNQ14191 1432 aaPredicted RBP eCLIP38■■■■□ 3.67
MED17-227ENST00000640521 EHMT2Q96KQ7 1210 aa37.9■■■■□ 3.66
MED17-227ENST00000640521 SOGA1O94964 1423 aa37.87■■■■□ 3.65
MED17-227ENST00000640521 SYNJ1O43426 1573 aa37.87■■■■□ 3.65
MED17-227ENST00000640521 PCGF6Q9BYE7 350 aa37.85■■■■□ 3.65
MED17-227ENST00000640521 EEA1Q15075 1411 aa37.82■■■■□ 3.64
MED17-227ENST00000640521 RUSC2Q8N2Y8 1516 aa37.72■■■■□ 3.63
MED17-227ENST00000640521 CC2D2AQ9P2K1 1620 aa37.64■■■■□ 3.62
MED17-227ENST00000640521 CSRNP3Q8WYN3 585 aa37.63■■■■□ 3.61
MED17-227ENST00000640521 CFTRP13569 1480 aa37.6■■■■□ 3.61
MED17-227ENST00000640521 TOP2BQ02880 1626 aa37.6■■■■□ 3.61
MED17-227ENST00000640521 TRIM26Q12899 539 aaPredicted RBP37.58■■■■□ 3.61
MED17-227ENST00000640521 BIVM-ERCC5R4GMW8 1640 aa37.55■■■■□ 3.6
MED17-227ENST00000640521 PRDM2Q13029 1718 aa37.45■■■■□ 3.59
MED17-227ENST00000640521 TNIKQ9UKE5 1360 aa37.44■■■■□ 3.58
MED17-227ENST00000640521 HRCP23327 699 aa37.39■■■■□ 3.58
MED17-227ENST00000640521 GOLGA3Q08378 1498 aa37.39■■■■□ 3.58
MED17-227ENST00000640521 CUX1P39880 1505 aa37.35■■■■□ 3.57
MED17-227ENST00000640521 KIF21BO75037 1637 aa37.34■■■■□ 3.57
MED17-227ENST00000640521 CEP162Q5TB80 1403 aa37.32■■■■□ 3.57
MED17-227ENST00000640521 CADPSQ9ULU8 1353 aa37.31■■■■□ 3.56
MED17-227ENST00000640521 CEP164Q9UPV0 1460 aa37.3■■■■□ 3.56
MED17-227ENST00000640521 UBTFP17480 764 aaKnown RBP37.23■■■■□ 3.55
MED17-227ENST00000640521 RAPGEF2Q9Y4G8 1499 aa37.04■■■■□ 3.52
MED17-227ENST00000640521 PPARGC1BQ86YN6 1023 aaKnown RBP36.95■■■■□ 3.51
MED17-227ENST00000640521 KIF27Q86VH2 1401 aa36.94■■■■□ 3.5
MED17-227ENST00000640521 PRXQ9BXM0 1461 aa36.94■■■■□ 3.5
MED17-227ENST00000640521 ERICH3Q5RHP9 1530 aa36.92■■■■□ 3.5
MED17-227ENST00000640521 FANCD2Q9BXW9 1451 aa36.91■■■■□ 3.5
MED17-227ENST00000640521 CLIP1P30622 1438 aa36.84■■■■□ 3.49
MED17-227ENST00000640521 NESP48681 1621 aa36.81■■■■□ 3.48
MED17-227ENST00000640521 FGD5Q6ZNL6 1462 aa36.8■■■■□ 3.48
MED17-227ENST00000640521 LAMC3Q9Y6N6 1575 aa36.76■■■■□ 3.48
MED17-227ENST00000640521 CUX2O14529 1486 aa36.72■■■■□ 3.47
MED17-227ENST00000640521 DNMBPQ6XZF7 1577 aa36.71■■■■□ 3.47
MED17-227ENST00000640521 VPS8Q8N3P4 1428 aa36.62■■■■□ 3.45
MED17-227ENST00000640521 TOPBP1Q92547 1522 aa36.61■■■■□ 3.45
MED17-227ENST00000640521 IGF1RP08069 1367 aa36.6■■■■□ 3.45
MED17-227ENST00000640521 DNAJC5BQ9UF47 199 aa36.59■■■■□ 3.45
MED17-227ENST00000640521 POLA1P09884 1462 aaPredicted RBP36.5■■■■□ 3.43
MED17-227ENST00000640521 RANGAP1P46060 587 aaPredicted RBP36.47■■■■□ 3.43
MED17-227ENST00000640521 TTBK1Q5TCY1 1321 aaPredicted RBP36.47■■■■□ 3.43
MED17-227ENST00000640521 ABCA10Q8WWZ4 1543 aa36.46■■■■□ 3.43
MED17-227ENST00000640521 PDS5BQ9NTI5 1447 aa36.45■■■■□ 3.43
MED17-227ENST00000640521 URB2Q14146 1524 aaKnown RBP36.44■■■■□ 3.42
MED17-227ENST00000640521 RAD54L2Q9Y4B4 1467 aa36.44■■■■□ 3.42
MED17-227ENST00000640521 ZEB1P37275 1124 aaPredicted RBP36.43■■■■□ 3.42
MED17-227ENST00000640521 ARAP1Q96P48 1450 aa36.42■■■■□ 3.42
MED17-227ENST00000640521 CARMIL1Q5VZK9 1371 aa36.41■■■■□ 3.42
MED17-227ENST00000640521 KIF21AQ7Z4S6 1674 aa36.34■■■■□ 3.41
MED17-227ENST00000640521 WDR97A6NE52 1622 aa36.3■■■■□ 3.4
MED17-227ENST00000640521 ARHGAP35Q9NRY4 1499 aa36.25■■■■□ 3.39
MED17-227ENST00000640521 APLP2Q06481 763 aa36.25■■■■□ 3.39
MED17-227ENST00000640521 CUL7Q14999 1698 aa36.18■■■■□ 3.38
MED17-227ENST00000640521 ABCA5Q8WWZ7 1642 aa36.12■■■■□ 3.37
MED17-227ENST00000640521 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP36.06■■■■□ 3.36
MED17-227ENST00000640521 TARBP1Q13395 1621 aaKnown RBP36.01■■■■□ 3.35
MED17-227ENST00000640521 TDRD9Q8NDG6 1382 aaKnown RBP36■■■■□ 3.35
MED17-227ENST00000640521 GAPVD1Q14C86 1478 aa35.99■■■■□ 3.35
MED17-227ENST00000640521 CCER1Q8TC90 406 aaPredicted RBP35.96■■■■□ 3.35
MED17-227ENST00000640521 MRC2Q9UBG0 1479 aa35.96■■■■□ 3.35
MED17-227ENST00000640521 CTTNBP2Q8WZ74 1663 aa35.93■■■■□ 3.34
MED17-227ENST00000640521 KANK4Q5T7N3 995 aaPredicted RBP35.91■■■■□ 3.34
MED17-227ENST00000640521 EFCAB5A4FU69 1503 aa35.82■■■■□ 3.32
MED17-227ENST00000640521 MAP3K1Q13233 1512 aa35.81■■■■□ 3.32
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms