RNA–Protein interactions for RNA: ENST00000310112.7

SNCB-201, Transcript of synuclein beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNCB, Length 1,383 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCB-201ENST00000310112 NISCHQ9Y2I1 1504 aa53■■■■■ 6.08
SNCB-201ENST00000310112 CCDC180Q9P1Z9 1646 aa46.23■■■■■ 4.99
SNCB-201ENST00000310112 ZCCHC6Q5VYS8 1495 aaKnown RBP44.58■■■■■ 4.73
SNCB-201ENST00000310112 DCAF1Q9Y4B6 1507 aa43.99■■■■■ 4.63
SNCB-201ENST00000310112 DCAF8L2P0C7V8 631 aa43.45■■■■■ 4.55
SNCB-201ENST00000310112 MYO15BQ96JP2 1530 aa43.42■■■■■ 4.54
SNCB-201ENST00000310112 ABCC9O60706 1549 aa43.24■■■■■ 4.51
SNCB-201ENST00000310112 SHROOM4Q9ULL8 1493 aa43.11■■■■■ 4.49
SNCB-201ENST00000310112 NACADO15069 1562 aa42.99■■■■■ 4.47
SNCB-201ENST00000310112 RB1CC1Q8TDY2 1594 aa42.53■■■■■ 4.4
SNCB-201ENST00000310112 SCRIBQ14160 1630 aa42.3■■■■■ 4.36
SNCB-201ENST00000310112 SUPT5HO00267 1087 aaKnown RBP41.65■■■■■ 4.26
SNCB-201ENST00000310112 UNC13AQ9UPW8 1703 aa41.54■■■■■ 4.24
SNCB-201ENST00000310112 RSF1Q96T23 1441 aaPredicted RBP41.16■■■■■ 4.18
SNCB-201ENST00000310112 BICRAQ9NZM4 1560 aa41.13■■■■■ 4.17
SNCB-201ENST00000310112 CECR2Q9BXF3 1484 aa41.01■■■■■ 4.16
SNCB-201ENST00000310112 BAZ1AQ9NRL2 1556 aaPredicted RBP40.96■■■■■ 4.15
SNCB-201ENST00000310112 MROH2BQ7Z745 1585 aa40.87■■■■■ 4.13
SNCB-201ENST00000310112 PABPN1Q86U42 306 aaKnown RBP eCLIP40.75■■■■■ 4.11
SNCB-201ENST00000310112 SMARCA4P51532 1647 aa40.68■■■■■ 4.1
SNCB-201ENST00000310112 WIZO95785 1651 aa40.52■■■■■ 4.08
SNCB-201ENST00000310112 PEG3Q9GZU2 1588 aa40.27■■■■■ 4.04
SNCB-201ENST00000310112 TOP2AP11388 1531 aaKnown RBP40.24■■■■■ 4.03
SNCB-201ENST00000310112 CHIC1Q5VXU3 224 aa40.1■■■■■ 4.01
SNCB-201ENST00000310112 SMARCA2P51531 1590 aa40.03■■■■■ 4
SNCB-201ENST00000310112 ATAD2BQ9ULI0 1458 aa39.96■■■■□ 3.99
SNCB-201ENST00000310112 EIF4G1Q04637 1599 aaKnown RBP39.9■■■■□ 3.98
SNCB-201ENST00000310112 CCDC88BA6NC98 1476 aa39.75■■■■□ 3.95
SNCB-201ENST00000310112 BAZ1BQ9UIG0 1483 aaKnown RBP39.75■■■■□ 3.95
SNCB-201ENST00000310112 NCAPD3P42695 1498 aa39.64■■■■□ 3.94
SNCB-201ENST00000310112 HMGXB3Q12766 1538 aa39.63■■■■□ 3.93
SNCB-201ENST00000310112 TRIM41Q8WV44 630 aa39.28■■■■□ 3.88
SNCB-201ENST00000310112 CC2D2AQ9P2K1 1620 aa39.22■■■■□ 3.87
SNCB-201ENST00000310112 ABCC8Q09428 1581 aa38.88■■■■□ 3.82
SNCB-201ENST00000310112 CFTRP13569 1480 aa38.79■■■■□ 3.8
SNCB-201ENST00000310112 WRNQ14191 1432 aaPredicted RBP eCLIP38.76■■■■□ 3.8
SNCB-201ENST00000310112 PRDM2Q13029 1718 aa38.66■■■■□ 3.78
SNCB-201ENST00000310112 CADPSQ9ULU8 1353 aa38.61■■■■□ 3.77
SNCB-201ENST00000310112 SYNJ1O43426 1573 aa38.51■■■■□ 3.76
SNCB-201ENST00000310112 EEA1Q15075 1411 aa38.5■■■■□ 3.75
SNCB-201ENST00000310112 TOP2BQ02880 1626 aa38.45■■■■□ 3.75
SNCB-201ENST00000310112 LOC105371045A0A1W2PR82 267 aa38.43■■■■□ 3.74
SNCB-201ENST00000310112 BIVM-ERCC5R4GMW8 1640 aa38.42■■■■□ 3.74
SNCB-201ENST00000310112 FAM9AQ8IZU1 332 aaPredicted RBP38.38■■■■□ 3.73
SNCB-201ENST00000310112 LAMC3Q9Y6N6 1575 aa38.27■■■■□ 3.72
SNCB-201ENST00000310112 SOGA1O94964 1423 aa38.23■■■■□ 3.71
SNCB-201ENST00000310112 CUX1P39880 1505 aa38.22■■■■□ 3.71
SNCB-201ENST00000310112 FANCD2Q9BXW9 1451 aa38.14■■■■□ 3.7
SNCB-201ENST00000310112 CSRNP3Q8WYN3 585 aa38.1■■■■□ 3.69
SNCB-201ENST00000310112 RUSC2Q8N2Y8 1516 aa38.02■■■■□ 3.68
SNCB-201ENST00000310112 NESP48681 1621 aa38.01■■■■□ 3.67
SNCB-201ENST00000310112 PDS5BQ9NTI5 1447 aa37.97■■■■□ 3.67
SNCB-201ENST00000310112 CEP164Q9UPV0 1460 aa37.91■■■■□ 3.66
SNCB-201ENST00000310112 DNMBPQ6XZF7 1577 aa37.9■■■■□ 3.66
SNCB-201ENST00000310112 KIF21BO75037 1637 aa37.89■■■■□ 3.66
SNCB-201ENST00000310112 DNAJC5BQ9UF47 199 aa37.88■■■■□ 3.65
SNCB-201ENST00000310112 GOLGA3Q08378 1498 aa37.86■■■■□ 3.65
SNCB-201ENST00000310112 KIF27Q86VH2 1401 aa37.81■■■■□ 3.64
SNCB-201ENST00000310112 TNIKQ9UKE5 1360 aa37.8■■■■□ 3.64
SNCB-201ENST00000310112 FGD5Q6ZNL6 1462 aa37.77■■■■□ 3.64
SNCB-201ENST00000310112 TOPBP1Q92547 1522 aa37.76■■■■□ 3.63
SNCB-201ENST00000310112 EHMT2Q96KQ7 1210 aa37.68■■■■□ 3.62
SNCB-201ENST00000310112 ERICH3Q5RHP9 1530 aa37.62■■■■□ 3.61
SNCB-201ENST00000310112 KIF21AQ7Z4S6 1674 aa37.62■■■■□ 3.61
SNCB-201ENST00000310112 URB2Q14146 1524 aaKnown RBP37.61■■■■□ 3.61
SNCB-201ENST00000310112 PRXQ9BXM0 1461 aa37.59■■■■□ 3.61
SNCB-201ENST00000310112 CUX2O14529 1486 aa37.58■■■■□ 3.61
SNCB-201ENST00000310112 POLA1P09884 1462 aaPredicted RBP37.56■■■■□ 3.6
SNCB-201ENST00000310112 UBTFP17480 764 aaKnown RBP37.55■■■■□ 3.6
SNCB-201ENST00000310112 ABCA10Q8WWZ4 1543 aa37.53■■■■□ 3.6
SNCB-201ENST00000310112 CEP162Q5TB80 1403 aa37.52■■■■□ 3.6
SNCB-201ENST00000310112 RAPGEF2Q9Y4G8 1499 aa37.47■■■■□ 3.59
SNCB-201ENST00000310112 MRC2Q9UBG0 1479 aa37.42■■■■□ 3.58
SNCB-201ENST00000310112 IGF1RP08069 1367 aa37.39■■■■□ 3.58
SNCB-201ENST00000310112 RAD54L2Q9Y4B4 1467 aa37.36■■■■□ 3.57
SNCB-201ENST00000310112 WDR97A6NE52 1622 aa37.35■■■■□ 3.57
SNCB-201ENST00000310112 CARMIL1Q5VZK9 1371 aa37.22■■■■□ 3.55
SNCB-201ENST00000310112 WDR62O43379 1518 aa37.21■■■■□ 3.55
SNCB-201ENST00000310112 CLIP1P30622 1438 aa37.2■■■■□ 3.55
SNCB-201ENST00000310112 CUL7Q14999 1698 aa37.18■■■■□ 3.54
SNCB-201ENST00000310112 TARBP1Q13395 1621 aaKnown RBP37.17■■■■□ 3.54
SNCB-201ENST00000310112 ABCA5Q8WWZ7 1642 aa37.17■■■■□ 3.54
SNCB-201ENST00000310112 ERCC6Q03468 1493 aa37.14■■■■□ 3.54
SNCB-201ENST00000310112 TRIM26Q12899 539 aaPredicted RBP37.09■■■■□ 3.53
SNCB-201ENST00000310112 GAPVD1Q14C86 1478 aa37.08■■■■□ 3.53
SNCB-201ENST00000310112 IFT140Q96RY7 1462 aa37.03■■■■□ 3.52
SNCB-201ENST00000310112 THOC2Q8NI27 1593 aaKnown RBP37■■■■□ 3.51
SNCB-201ENST00000310112 TDRD9Q8NDG6 1382 aaKnown RBP36.98■■■■□ 3.51
SNCB-201ENST00000310112 VPS8Q8N3P4 1428 aa36.95■■■■□ 3.5
SNCB-201ENST00000310112 PCGF6Q9BYE7 350 aa36.94■■■■□ 3.5
SNCB-201ENST00000310112 PBRM1Q86U86 1689 aa36.84■■■■□ 3.49
SNCB-201ENST00000310112 GRIN2BQ13224 1484 aa36.79■■■■□ 3.48
SNCB-201ENST00000310112 ARAP1Q96P48 1450 aa36.77■■■■□ 3.48
SNCB-201ENST00000310112 CTTNBP2Q8WZ74 1663 aa36.74■■■■□ 3.47
SNCB-201ENST00000310112 ARHGAP35Q9NRY4 1499 aa36.73■■■■□ 3.47
SNCB-201ENST00000310112 FHAD1B1AJZ9 1412 aa36.73■■■■□ 3.47
SNCB-201ENST00000310112 AQRO60306 1485 aaKnown RBP eCLIP36.71■■■■□ 3.47
SNCB-201ENST00000310112 ADAMTS12P58397 1594 aa36.67■■■■□ 3.46
SNCB-201ENST00000310112 RANGAP1P46060 587 aaPredicted RBP36.66■■■■□ 3.46
SNCB-201ENST00000310112 EFCAB5A4FU69 1503 aa36.64■■■■□ 3.46
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms