RNA–Protein interactions for RNA: ENST00000263735.8

EPCAM-201, Transcript of epithelial cell adhesion molecule, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EPCAM, Length 1,724 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPCAM-201ENST00000263735 NISCHQ9Y2I1 1504 aa54.82■■■■■ 6.37
EPCAM-201ENST00000263735 CCDC180Q9P1Z9 1646 aa48.15■■■■■ 5.3
EPCAM-201ENST00000263735 ZCCHC6Q5VYS8 1495 aaKnown RBP46.03■■■■■ 4.96
EPCAM-201ENST00000263735 DCAF1Q9Y4B6 1507 aa45.43■■■■■ 4.86
EPCAM-201ENST00000263735 ABCC9O60706 1549 aa45.41■■■■■ 4.86
EPCAM-201ENST00000263735 DCAF8L2P0C7V8 631 aa45.05■■■■■ 4.8
EPCAM-201ENST00000263735 MYO15BQ96JP2 1530 aa45■■■■■ 4.79
EPCAM-201ENST00000263735 NACADO15069 1562 aa44.76■■■■■ 4.76
EPCAM-201ENST00000263735 RB1CC1Q8TDY2 1594 aa44.44■■■■■ 4.7
EPCAM-201ENST00000263735 SHROOM4Q9ULL8 1493 aa44.31■■■■■ 4.68
EPCAM-201ENST00000263735 SCRIBQ14160 1630 aa44.03■■■■■ 4.64
EPCAM-201ENST00000263735 UNC13AQ9UPW8 1703 aa43.71■■■■■ 4.59
EPCAM-201ENST00000263735 BICRAQ9NZM4 1560 aa43.06■■■■■ 4.48
EPCAM-201ENST00000263735 PABPN1Q86U42 306 aaKnown RBP eCLIP42.63■■■■■ 4.41
EPCAM-201ENST00000263735 CECR2Q9BXF3 1484 aa42.51■■■■■ 4.4
EPCAM-201ENST00000263735 SUPT5HO00267 1087 aaKnown RBP42.49■■■■■ 4.39
EPCAM-201ENST00000263735 BAZ1AQ9NRL2 1556 aaPredicted RBP42.4■■■■■ 4.38
EPCAM-201ENST00000263735 RSF1Q96T23 1441 aaPredicted RBP42.34■■■■■ 4.37
EPCAM-201ENST00000263735 MROH2BQ7Z745 1585 aa42.3■■■■■ 4.36
EPCAM-201ENST00000263735 SMARCA4P51532 1647 aa42.27■■■■■ 4.36
EPCAM-201ENST00000263735 WIZO95785 1651 aa42.02■■■■■ 4.32
EPCAM-201ENST00000263735 PEG3Q9GZU2 1588 aa41.79■■■■■ 4.28
EPCAM-201ENST00000263735 EIF4G1Q04637 1599 aaKnown RBP41.78■■■■■ 4.28
EPCAM-201ENST00000263735 SMARCA2P51531 1590 aa41.59■■■■■ 4.25
EPCAM-201ENST00000263735 TOP2AP11388 1531 aaKnown RBP41.59■■■■■ 4.25
EPCAM-201ENST00000263735 ATAD2BQ9ULI0 1458 aa41.52■■■■■ 4.24
EPCAM-201ENST00000263735 BAZ1BQ9UIG0 1483 aaKnown RBP41.3■■■■■ 4.2
EPCAM-201ENST00000263735 HMGXB3Q12766 1538 aa41.26■■■■■ 4.19
EPCAM-201ENST00000263735 CC2D2AQ9P2K1 1620 aa41.23■■■■■ 4.19
EPCAM-201ENST00000263735 NCAPD3P42695 1498 aa41.22■■■■■ 4.19
EPCAM-201ENST00000263735 CCDC88BA6NC98 1476 aa41.05■■■■■ 4.16
EPCAM-201ENST00000263735 CHIC1Q5VXU3 224 aa40.62■■■■■ 4.09
EPCAM-201ENST00000263735 PRDM2Q13029 1718 aa40.37■■■■■ 4.05
EPCAM-201ENST00000263735 CFTRP13569 1480 aa40.24■■■■■ 4.03
EPCAM-201ENST00000263735 ABCC8Q09428 1581 aa40.14■■■■■ 4.02
EPCAM-201ENST00000263735 DNAJC5BQ9UF47 199 aa40.09■■■■■ 4.01
EPCAM-201ENST00000263735 CADPSQ9ULU8 1353 aa40.09■■■■■ 4.01
EPCAM-201ENST00000263735 TRIM41Q8WV44 630 aa40.05■■■■■ 4
EPCAM-201ENST00000263735 LAMC3Q9Y6N6 1575 aa39.98■■■■□ 3.99
EPCAM-201ENST00000263735 WRNQ14191 1432 aaPredicted RBP eCLIP39.9■■■■□ 3.98
EPCAM-201ENST00000263735 SYNJ1O43426 1573 aa39.81■■■■□ 3.96
EPCAM-201ENST00000263735 NESP48681 1621 aa39.8■■■■□ 3.96
EPCAM-201ENST00000263735 BIVM-ERCC5R4GMW8 1640 aa39.76■■■■□ 3.96
EPCAM-201ENST00000263735 TOP2BQ02880 1626 aa39.73■■■■□ 3.95
EPCAM-201ENST00000263735 FANCD2Q9BXW9 1451 aa39.68■■■■□ 3.94
EPCAM-201ENST00000263735 CUX1P39880 1505 aa39.59■■■■□ 3.93
EPCAM-201ENST00000263735 KIF21AQ7Z4S6 1674 aa39.55■■■■□ 3.92
EPCAM-201ENST00000263735 PDS5BQ9NTI5 1447 aa39.54■■■■□ 3.92
EPCAM-201ENST00000263735 CEP164Q9UPV0 1460 aa39.5■■■■□ 3.91
EPCAM-201ENST00000263735 DNMBPQ6XZF7 1577 aa39.39■■■■□ 3.9
EPCAM-201ENST00000263735 EEA1Q15075 1411 aa39.28■■■■□ 3.88
EPCAM-201ENST00000263735 TOPBP1Q92547 1522 aa39.26■■■■□ 3.88
EPCAM-201ENST00000263735 SOGA1O94964 1423 aa39.25■■■■□ 3.87
EPCAM-201ENST00000263735 URB2Q14146 1524 aaKnown RBP39.2■■■■□ 3.87
EPCAM-201ENST00000263735 FAM9AQ8IZU1 332 aaPredicted RBP39.2■■■■□ 3.87
EPCAM-201ENST00000263735 FGD5Q6ZNL6 1462 aa39.18■■■■□ 3.86
EPCAM-201ENST00000263735 RUSC2Q8N2Y8 1516 aa39.12■■■■□ 3.85
EPCAM-201ENST00000263735 MRC2Q9UBG0 1479 aa39.08■■■■□ 3.85
EPCAM-201ENST00000263735 POLA1P09884 1462 aaPredicted RBP39.04■■■■□ 3.84
EPCAM-201ENST00000263735 ERCC6Q03468 1493 aa39■■■■□ 3.83
EPCAM-201ENST00000263735 LOC105371045A0A1W2PR82 267 aa38.96■■■■□ 3.83
EPCAM-201ENST00000263735 WDR62O43379 1518 aa38.94■■■■□ 3.82
EPCAM-201ENST00000263735 WDR97A6NE52 1622 aa38.94■■■■□ 3.82
EPCAM-201ENST00000263735 THOC2Q8NI27 1593 aaKnown RBP38.92■■■■□ 3.82
EPCAM-201ENST00000263735 CSRNP3Q8WYN3 585 aa38.92■■■■□ 3.82
EPCAM-201ENST00000263735 KIF27Q86VH2 1401 aa38.91■■■■□ 3.82
EPCAM-201ENST00000263735 ABCA10Q8WWZ4 1543 aa38.87■■■■□ 3.81
EPCAM-201ENST00000263735 KIF21BO75037 1637 aa38.85■■■■□ 3.81
EPCAM-201ENST00000263735 CUX2O14529 1486 aa38.85■■■■□ 3.81
EPCAM-201ENST00000263735 RAD54L2Q9Y4B4 1467 aa38.83■■■■□ 3.81
EPCAM-201ENST00000263735 TARBP1Q13395 1621 aaKnown RBP38.77■■■■□ 3.8
EPCAM-201ENST00000263735 GOLGA3Q08378 1498 aa38.69■■■■□ 3.78
EPCAM-201ENST00000263735 ABCA5Q8WWZ7 1642 aa38.66■■■■□ 3.78
EPCAM-201ENST00000263735 ERICH3Q5RHP9 1530 aa38.62■■■■□ 3.77
EPCAM-201ENST00000263735 PRXQ9BXM0 1461 aa38.6■■■■□ 3.77
EPCAM-201ENST00000263735 EHMT2Q96KQ7 1210 aa38.58■■■■□ 3.77
EPCAM-201ENST00000263735 IFT140Q96RY7 1462 aa38.56■■■■□ 3.76
EPCAM-201ENST00000263735 IGF1RP08069 1367 aa38.52■■■■□ 3.76
EPCAM-201ENST00000263735 CUL7Q14999 1698 aa38.51■■■■□ 3.76
EPCAM-201ENST00000263735 RAPGEF2Q9Y4G8 1499 aa38.51■■■■□ 3.75
EPCAM-201ENST00000263735 PBRM1Q86U86 1689 aa38.48■■■■□ 3.75
EPCAM-201ENST00000263735 TNIKQ9UKE5 1360 aa38.47■■■■□ 3.75
EPCAM-201ENST00000263735 GAPVD1Q14C86 1478 aa38.47■■■■□ 3.75
EPCAM-201ENST00000263735 TDRD9Q8NDG6 1382 aaKnown RBP38.42■■■■□ 3.74
EPCAM-201ENST00000263735 UBTFP17480 764 aaKnown RBP38.36■■■■□ 3.73
EPCAM-201ENST00000263735 CARMIL1Q5VZK9 1371 aa38.35■■■■□ 3.73
EPCAM-201ENST00000263735 EIF4G3O43432 1585 aaKnown RBP38.31■■■■□ 3.72
EPCAM-201ENST00000263735 ZNF608Q9ULD9 1512 aaPredicted RBP38.28■■■■□ 3.72
EPCAM-201ENST00000263735 AQRO60306 1485 aaKnown RBP eCLIP38.25■■■■□ 3.718e-7■■■□□ 16.1
EPCAM-201ENST00000263735 CEP162Q5TB80 1403 aa38.24■■■■□ 3.71
EPCAM-201ENST00000263735 GRIN2BQ13224 1484 aa38.21■■■■□ 3.71
EPCAM-201ENST00000263735 ADAMTS12P58397 1594 aa38.15■■■■□ 3.7
EPCAM-201ENST00000263735 CTTNBP2Q8WZ74 1663 aa38.12■■■■□ 3.69
EPCAM-201ENST00000263735 FHAD1B1AJZ9 1412 aa38.05■■■■□ 3.68
EPCAM-201ENST00000263735 CLIP1P30622 1438 aa38■■■■□ 3.67
EPCAM-201ENST00000263735 SNAPC4Q5SXM2 1469 aa37.97■■■■□ 3.67
EPCAM-201ENST00000263735 MAGI1Q96QZ7 1491 aaPredicted RBP37.96■■■■□ 3.67
EPCAM-201ENST00000263735 SYNJ2O15056 1496 aa37.79■■■■□ 3.64
EPCAM-201ENST00000263735 GRIN2AQ12879 1464 aa37.76■■■■□ 3.64
EPCAM-201ENST00000263735 ARHGAP35Q9NRY4 1499 aa37.72■■■■□ 3.63
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms