RNA–Protein interactions for RNA: ENST00000538342.5

SH2B1-205, Transcript of SH2B adaptor protein 1, humanhuman

TSL 2 BASIC

Gene SH2B1, Length 1,532 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH2B1-205ENST00000538342 NISCHQ9Y2I1 1504 aa56.2■■■■■ 6.59
SH2B1-205ENST00000538342 CCDC180Q9P1Z9 1646 aa49.36■■■■■ 5.49
SH2B1-205ENST00000538342 ABCC9O60706 1549 aa47.26■■■■■ 5.16
SH2B1-205ENST00000538342 ZCCHC6Q5VYS8 1495 aaKnown RBP47.08■■■■■ 5.13
SH2B1-205ENST00000538342 DCAF8L2P0C7V8 631 aa46.59■■■■■ 5.05
SH2B1-205ENST00000538342 DCAF1Q9Y4B6 1507 aa46.49■■■■■ 5.03
SH2B1-205ENST00000538342 MYO15BQ96JP2 1530 aa46.21■■■■■ 4.99
SH2B1-205ENST00000538342 NACADO15069 1562 aa46.14■■■■■ 4.98
SH2B1-205ENST00000538342 RB1CC1Q8TDY2 1594 aa45.91■■■■■ 4.94
SH2B1-205ENST00000538342 SHROOM4Q9ULL8 1493 aa45.31■■■■■ 4.84
SH2B1-205ENST00000538342 SCRIBQ14160 1630 aa45.27■■■■■ 4.84
SH2B1-205ENST00000538342 UNC13AQ9UPW8 1703 aa44.9■■■■■ 4.78
SH2B1-205ENST00000538342 BICRAQ9NZM4 1560 aa44.5■■■■■ 4.71
SH2B1-205ENST00000538342 PABPN1Q86U42 306 aaKnown RBP eCLIP44.41■■■■■ 4.74e-6■□□□□ 10.2
SH2B1-205ENST00000538342 CECR2Q9BXF3 1484 aa43.69■■■■■ 4.59
SH2B1-205ENST00000538342 BAZ1AQ9NRL2 1556 aaPredicted RBP43.47■■■■■ 4.55
SH2B1-205ENST00000538342 MROH2BQ7Z745 1585 aa43.38■■■■■ 4.53
SH2B1-205ENST00000538342 SMARCA4P51532 1647 aa43.35■■■■■ 4.53
SH2B1-205ENST00000538342 RSF1Q96T23 1441 aaPredicted RBP43.32■■■■■ 4.53
SH2B1-205ENST00000538342 SUPT5HO00267 1087 aaKnown RBP43.25■■■■■ 4.51
SH2B1-205ENST00000538342 EIF4G1Q04637 1599 aaKnown RBP43.23■■■■■ 4.51
SH2B1-205ENST00000538342 WIZO95785 1651 aa42.98■■■■■ 4.47
SH2B1-205ENST00000538342 PEG3Q9GZU2 1588 aa42.86■■■■■ 4.45
SH2B1-205ENST00000538342 ATAD2BQ9ULI0 1458 aa42.81■■■■■ 4.44
SH2B1-205ENST00000538342 SMARCA2P51531 1590 aa42.8■■■■■ 4.44
SH2B1-205ENST00000538342 CC2D2AQ9P2K1 1620 aa42.76■■■■■ 4.44
SH2B1-205ENST00000538342 NCAPD3P42695 1498 aa42.57■■■■■ 4.4
SH2B1-205ENST00000538342 TOP2AP11388 1531 aaKnown RBP42.56■■■■■ 4.4
SH2B1-205ENST00000538342 BAZ1BQ9UIG0 1483 aaKnown RBP42.55■■■■■ 4.4
SH2B1-205ENST00000538342 HMGXB3Q12766 1538 aa42.46■■■■■ 4.39
SH2B1-205ENST00000538342 DNAJC5BQ9UF47 199 aa42.26■■■■■ 4.36
SH2B1-205ENST00000538342 CCDC88BA6NC98 1476 aa42.08■■■■■ 4.33
SH2B1-205ENST00000538342 CFTRP13569 1480 aa41.43■■■■■ 4.22
SH2B1-205ENST00000538342 CADPSQ9ULU8 1353 aa41.42■■■■■ 4.22
SH2B1-205ENST00000538342 NESP48681 1621 aa41.26■■■■■ 4.2
SH2B1-205ENST00000538342 LAMC3Q9Y6N6 1575 aa41.25■■■■■ 4.19
SH2B1-205ENST00000538342 PRDM2Q13029 1718 aa41.18■■■■■ 4.18
SH2B1-205ENST00000538342 CHIC1Q5VXU3 224 aa41.03■■■■■ 4.16
SH2B1-205ENST00000538342 FANCD2Q9BXW9 1451 aa40.97■■■■■ 4.15
SH2B1-205ENST00000538342 ABCC8Q09428 1581 aa40.95■■■■■ 4.15
SH2B1-205ENST00000538342 PDS5BQ9NTI5 1447 aa40.95■■■■■ 4.15
SH2B1-205ENST00000538342 WRNQ14191 1432 aaPredicted RBP eCLIP40.81■■■■■ 4.12
SH2B1-205ENST00000538342 CEP164Q9UPV0 1460 aa40.8■■■■■ 4.12
SH2B1-205ENST00000538342 KIF21AQ7Z4S6 1674 aa40.77■■■■■ 4.12
SH2B1-205ENST00000538342 TRIM41Q8WV44 630 aa40.73■■■■■ 4.11
SH2B1-205ENST00000538342 SYNJ1O43426 1573 aa40.66■■■■■ 4.1
SH2B1-205ENST00000538342 ERCC6Q03468 1493 aa40.62■■■■■ 4.09
SH2B1-205ENST00000538342 CUX1P39880 1505 aa40.62■■■■■ 4.09
SH2B1-205ENST00000538342 TOP2BQ02880 1626 aa40.56■■■■■ 4.08
SH2B1-205ENST00000538342 BIVM-ERCC5R4GMW8 1640 aa40.53■■■■■ 4.08
SH2B1-205ENST00000538342 URB2Q14146 1524 aaKnown RBP40.49■■■■■ 4.07
SH2B1-205ENST00000538342 DNMBPQ6XZF7 1577 aa40.49■■■■■ 4.07
SH2B1-205ENST00000538342 MRC2Q9UBG0 1479 aa40.47■■■■■ 4.07
SH2B1-205ENST00000538342 TOPBP1Q92547 1522 aa40.45■■■■■ 4.07
SH2B1-205ENST00000538342 THOC2Q8NI27 1593 aaKnown RBP40.31■■■■■ 4.04
SH2B1-205ENST00000538342 FGD5Q6ZNL6 1462 aa40.29■■■■■ 4.04
SH2B1-205ENST00000538342 WDR62O43379 1518 aa40.28■■■■■ 4.04
SH2B1-205ENST00000538342 POLA1P09884 1462 aaPredicted RBP40.2■■■■■ 4.03
SH2B1-205ENST00000538342 SOGA1O94964 1423 aa40.06■■■■■ 4
SH2B1-205ENST00000538342 RAD54L2Q9Y4B4 1467 aa40.04■■■■■ 4
SH2B1-205ENST00000538342 CUX2O14529 1486 aa39.97■■■■□ 3.99
SH2B1-205ENST00000538342 FAM9AQ8IZU1 332 aaPredicted RBP39.95■■■■□ 3.99
SH2B1-205ENST00000538342 RUSC2Q8N2Y8 1516 aa39.93■■■■□ 3.98
SH2B1-205ENST00000538342 ABCA10Q8WWZ4 1543 aa39.92■■■■□ 3.98
SH2B1-205ENST00000538342 TARBP1Q13395 1621 aaKnown RBP39.9■■■■□ 3.98
SH2B1-205ENST00000538342 EEA1Q15075 1411 aa39.87■■■■□ 3.97
SH2B1-205ENST00000538342 IFT140Q96RY7 1462 aa39.87■■■■□ 3.97
SH2B1-205ENST00000538342 WDR97A6NE52 1622 aa39.85■■■■□ 3.97
SH2B1-205ENST00000538342 KIF27Q86VH2 1401 aa39.85■■■■□ 3.97
SH2B1-205ENST00000538342 TDRD9Q8NDG6 1382 aaKnown RBP39.72■■■■□ 3.95
SH2B1-205ENST00000538342 CSRNP3Q8WYN3 585 aa39.69■■■■□ 3.94
SH2B1-205ENST00000538342 ABCA5Q8WWZ7 1642 aa39.65■■■■□ 3.94
SH2B1-205ENST00000538342 ZNF608Q9ULD9 1512 aaPredicted RBP39.64■■■■□ 3.94
SH2B1-205ENST00000538342 GAPVD1Q14C86 1478 aa39.61■■■■□ 3.93
SH2B1-205ENST00000538342 AQRO60306 1485 aaKnown RBP eCLIP39.58■■■■□ 3.935e-7■■■■■ 34.4
SH2B1-205ENST00000538342 IGF1RP08069 1367 aa39.54■■■■□ 3.92
SH2B1-205ENST00000538342 EIF4G3O43432 1585 aaKnown RBP39.51■■■■□ 3.92
SH2B1-205ENST00000538342 ERICH3Q5RHP9 1530 aa39.46■■■■□ 3.91
SH2B1-205ENST00000538342 PBRM1Q86U86 1689 aa39.44■■■■□ 3.9
SH2B1-205ENST00000538342 GRIN2BQ13224 1484 aa39.42■■■■□ 3.9
SH2B1-205ENST00000538342 LOC105371045A0A1W2PR82 267 aa39.41■■■■□ 3.9
SH2B1-205ENST00000538342 EHMT2Q96KQ7 1210 aa39.4■■■■□ 3.9
SH2B1-205ENST00000538342 PRXQ9BXM0 1461 aa39.39■■■■□ 3.9
SH2B1-205ENST00000538342 KIF21BO75037 1637 aa39.39■■■■□ 3.9
SH2B1-205ENST00000538342 CARMIL1Q5VZK9 1371 aa39.34■■■■□ 3.89
SH2B1-205ENST00000538342 CUL7Q14999 1698 aa39.34■■■■□ 3.89
SH2B1-205ENST00000538342 GOLGA3Q08378 1498 aa39.29■■■■□ 3.88
SH2B1-205ENST00000538342 RAPGEF2Q9Y4G8 1499 aa39.27■■■■□ 3.88
SH2B1-205ENST00000538342 SNAPC4Q5SXM2 1469 aa39.24■■■■□ 3.87
SH2B1-205ENST00000538342 ADAMTS12P58397 1594 aa39.2■■■■□ 3.87
SH2B1-205ENST00000538342 FHAD1B1AJZ9 1412 aa39.18■■■■□ 3.86
SH2B1-205ENST00000538342 MAGI1Q96QZ7 1491 aaPredicted RBP39.17■■■■□ 3.86
SH2B1-205ENST00000538342 UBTFP17480 764 aaKnown RBP39.12■■■■□ 3.85
SH2B1-205ENST00000538342 SYNJ2O15056 1496 aa39.02■■■■□ 3.84
SH2B1-205ENST00000538342 TNIKQ9UKE5 1360 aa39.01■■■■□ 3.84
SH2B1-205ENST00000538342 CHMP7Q8WUX9 453 aaPredicted RBP38.95■■■■□ 3.83
SH2B1-205ENST00000538342 GRIN2AQ12879 1464 aa38.92■■■■□ 3.82
SH2B1-205ENST00000538342 FBLN2P98095 1184 aa38.9■■■■□ 3.82
SH2B1-205ENST00000538342 CTTNBP2Q8WZ74 1663 aa38.78■■■■□ 3.8
SH2B1-205ENST00000538342 CHD1O14646 1710 aa38.78■■■■□ 3.8
Retrieved 100 of 20,778 RNA–protein pairs in 84.7 ms