RNA–Protein interactions for RNA: ENST00000316757.3

APBA3-201, Transcript of amyloid beta precursor protein binding family A member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene APBA3, Length 2,075 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APBA3-201ENST00000316757 NISCHQ9Y2I1 1504 aa51.72■■■■■ 5.87
APBA3-201ENST00000316757 CCDC180Q9P1Z9 1646 aa45.09■■■■■ 4.81
APBA3-201ENST00000316757 ZCCHC6Q5VYS8 1495 aaKnown RBP43.51■■■■■ 4.56
APBA3-201ENST00000316757 DCAF1Q9Y4B6 1507 aa42.76■■■■■ 4.44
APBA3-201ENST00000316757 DCAF8L2P0C7V8 631 aa42.56■■■■■ 4.4
APBA3-201ENST00000316757 SHROOM4Q9ULL8 1493 aa42.36■■■■■ 4.37
APBA3-201ENST00000316757 ABCC9O60706 1549 aa42.34■■■■■ 4.37
APBA3-201ENST00000316757 MYO15BQ96JP2 1530 aa42.15■■■■■ 4.34
APBA3-201ENST00000316757 NACADO15069 1562 aa41.86■■■■■ 4.29
APBA3-201ENST00000316757 SCRIBQ14160 1630 aa41.48■■■■■ 4.23
APBA3-201ENST00000316757 RB1CC1Q8TDY2 1594 aa41.47■■■■■ 4.23
APBA3-201ENST00000316757 SUPT5HO00267 1087 aaKnown RBP41.21■■■■■ 4.19
APBA3-201ENST00000316757 UNC13AQ9UPW8 1703 aa40.81■■■■■ 4.12
APBA3-201ENST00000316757 BICRAQ9NZM4 1560 aa40.23■■■■■ 4.03
APBA3-201ENST00000316757 RSF1Q96T23 1441 aaPredicted RBP40.17■■■■■ 4.02
APBA3-201ENST00000316757 CECR2Q9BXF3 1484 aa40.15■■■■■ 4.02
APBA3-201ENST00000316757 MROH2BQ7Z745 1585 aa39.97■■■■□ 3.99
APBA3-201ENST00000316757 BAZ1AQ9NRL2 1556 aaPredicted RBP39.94■■■■□ 3.98
APBA3-201ENST00000316757 PABPN1Q86U42 306 aaKnown RBP eCLIP39.91■■■■□ 3.98
APBA3-201ENST00000316757 CHIC1Q5VXU3 224 aa39.88■■■■□ 3.98
APBA3-201ENST00000316757 SMARCA4P51532 1647 aa39.77■■■■□ 3.96
APBA3-201ENST00000316757 WIZO95785 1651 aa39.73■■■■□ 3.95
APBA3-201ENST00000316757 TOP2AP11388 1531 aaKnown RBP39.28■■■■□ 3.88
APBA3-201ENST00000316757 PEG3Q9GZU2 1588 aa39.24■■■■□ 3.87
APBA3-201ENST00000316757 SMARCA2P51531 1590 aa39■■■■□ 3.83
APBA3-201ENST00000316757 EIF4G1Q04637 1599 aaKnown RBP38.99■■■■□ 3.83
APBA3-201ENST00000316757 ATAD2BQ9ULI0 1458 aa38.98■■■■□ 3.83
APBA3-201ENST00000316757 CCDC88BA6NC98 1476 aa38.84■■■■□ 3.81
APBA3-201ENST00000316757 BAZ1BQ9UIG0 1483 aaKnown RBP38.8■■■■□ 3.8
APBA3-201ENST00000316757 TRIM41Q8WV44 630 aa38.63■■■■□ 3.77
APBA3-201ENST00000316757 HMGXB3Q12766 1538 aa38.62■■■■□ 3.77
APBA3-201ENST00000316757 NCAPD3P42695 1498 aa38.58■■■■□ 3.77
APBA3-201ENST00000316757 LOC105371045A0A1W2PR82 267 aa38.45■■■■□ 3.75
APBA3-201ENST00000316757 CC2D2AQ9P2K1 1620 aa38.37■■■■□ 3.73
APBA3-201ENST00000316757 ABCC8Q09428 1581 aa38.17■■■■□ 3.7
APBA3-201ENST00000316757 FAM9AQ8IZU1 332 aaPredicted RBP38.02■■■■□ 3.68
APBA3-201ENST00000316757 PRDM2Q13029 1718 aa37.85■■■■□ 3.65
APBA3-201ENST00000316757 WRNQ14191 1432 aaPredicted RBP eCLIP37.82■■■■□ 3.65
APBA3-201ENST00000316757 CFTRP13569 1480 aa37.81■■■■□ 3.64
APBA3-201ENST00000316757 SYNJ1O43426 1573 aa37.73■■■■□ 3.63
APBA3-201ENST00000316757 PCGF6Q9BYE7 350 aa37.65■■■■□ 3.62
APBA3-201ENST00000316757 CADPSQ9ULU8 1353 aa37.6■■■■□ 3.61
APBA3-201ENST00000316757 TOP2BQ02880 1626 aa37.56■■■■□ 3.6
APBA3-201ENST00000316757 BIVM-ERCC5R4GMW8 1640 aa37.55■■■■□ 3.6
APBA3-201ENST00000316757 EHMT2Q96KQ7 1210 aa37.49■■■■□ 3.59
APBA3-201ENST00000316757 EEA1Q15075 1411 aa37.46■■■■□ 3.59
APBA3-201ENST00000316757 SOGA1O94964 1423 aa37.43■■■■□ 3.58
APBA3-201ENST00000316757 CUX1P39880 1505 aa37.37■■■■□ 3.57
APBA3-201ENST00000316757 TRIM26Q12899 539 aaPredicted RBP37.37■■■■□ 3.57
APBA3-201ENST00000316757 LAMC3Q9Y6N6 1575 aa37.31■■■■□ 3.56
APBA3-201ENST00000316757 RUSC2Q8N2Y8 1516 aa37.29■■■■□ 3.56
APBA3-201ENST00000316757 HRCP23327 699 aa37.27■■■■□ 3.56
APBA3-201ENST00000316757 NESP48681 1621 aa37.25■■■■□ 3.55
APBA3-201ENST00000316757 FANCD2Q9BXW9 1451 aa37.23■■■■□ 3.55
APBA3-201ENST00000316757 CSRNP3Q8WYN3 585 aa37.22■■■■□ 3.55
APBA3-201ENST00000316757 DNAJC5BQ9UF47 199 aa37.21■■■■□ 3.55
APBA3-201ENST00000316757 TNIKQ9UKE5 1360 aa37.08■■■■□ 3.53
APBA3-201ENST00000316757 GOLGA3Q08378 1498 aa37.03■■■■□ 3.52
APBA3-201ENST00000316757 CEP164Q9UPV0 1460 aa36.99■■■■□ 3.51
APBA3-201ENST00000316757 DNMBPQ6XZF7 1577 aa36.99■■■■□ 3.51
APBA3-201ENST00000316757 KIF21BO75037 1637 aa36.98■■■■□ 3.51
APBA3-201ENST00000316757 CEP162Q5TB80 1403 aa36.98■■■■□ 3.51
APBA3-201ENST00000316757 PDS5BQ9NTI5 1447 aa36.94■■■■□ 3.5
APBA3-201ENST00000316757 KIF21AQ7Z4S6 1674 aa36.93■■■■□ 3.5
APBA3-201ENST00000316757 FGD5Q6ZNL6 1462 aa36.92■■■■□ 3.5
APBA3-201ENST00000316757 TOPBP1Q92547 1522 aa36.87■■■■□ 3.49
APBA3-201ENST00000316757 UBTFP17480 764 aaKnown RBP36.86■■■■□ 3.49
APBA3-201ENST00000316757 KIF27Q86VH2 1401 aa36.84■■■■□ 3.49
APBA3-201ENST00000316757 URB2Q14146 1524 aaKnown RBP36.77■■■■□ 3.48
APBA3-201ENST00000316757 CUX2O14529 1486 aa36.71■■■■□ 3.47
APBA3-201ENST00000316757 POLA1P09884 1462 aaPredicted RBP36.71■■■■□ 3.47
APBA3-201ENST00000316757 RAPGEF2Q9Y4G8 1499 aa36.68■■■■□ 3.46
APBA3-201ENST00000316757 ERICH3Q5RHP9 1530 aa36.67■■■■□ 3.46
APBA3-201ENST00000316757 PRXQ9BXM0 1461 aa36.65■■■■□ 3.46
APBA3-201ENST00000316757 PPARGC1BQ86YN6 1023 aaKnown RBP36.6■■■■□ 3.45
APBA3-201ENST00000316757 ABCA10Q8WWZ4 1543 aa36.59■■■■□ 3.45
APBA3-201ENST00000316757 RAD54L2Q9Y4B4 1467 aa36.57■■■■□ 3.45
APBA3-201ENST00000316757 WDR97A6NE52 1622 aa36.57■■■■□ 3.45
APBA3-201ENST00000316757 MRC2Q9UBG0 1479 aa36.49■■■■□ 3.43
APBA3-201ENST00000316757 CLIP1P30622 1438 aa36.47■■■■□ 3.43
APBA3-201ENST00000316757 IGF1RP08069 1367 aa36.45■■■■□ 3.43
APBA3-201ENST00000316757 TARBP1Q13395 1621 aaKnown RBP36.35■■■■□ 3.41
APBA3-201ENST00000316757 ABCA5Q8WWZ7 1642 aa36.34■■■■□ 3.41
APBA3-201ENST00000316757 ZEB1P37275 1124 aaPredicted RBP36.32■■■■□ 3.4
APBA3-201ENST00000316757 WDR62O43379 1518 aa36.32■■■■□ 3.4
APBA3-201ENST00000316757 CUL7Q14999 1698 aa36.3■■■■□ 3.4
APBA3-201ENST00000316757 CARMIL1Q5VZK9 1371 aa36.29■■■■□ 3.4
APBA3-201ENST00000316757 ERCC6Q03468 1493 aa36.28■■■■□ 3.4
APBA3-201ENST00000316757 VPS8Q8N3P4 1428 aa36.28■■■■□ 3.4
APBA3-201ENST00000316757 THOC2Q8NI27 1593 aaKnown RBP36.2■■■■□ 3.39
APBA3-201ENST00000316757 GAPVD1Q14C86 1478 aa36.18■■■■□ 3.38
APBA3-201ENST00000316757 TDRD9Q8NDG6 1382 aaKnown RBP36.16■■■■□ 3.38
APBA3-201ENST00000316757 TTBK1Q5TCY1 1321 aaPredicted RBP36.13■■■■□ 3.37
APBA3-201ENST00000316757 PBRM1Q86U86 1689 aa36.11■■■■□ 3.37
APBA3-201ENST00000316757 IFT140Q96RY7 1462 aa36.06■■■■□ 3.36
APBA3-201ENST00000316757 RANGAP1P46060 587 aaPredicted RBP36.06■■■■□ 3.36
APBA3-201ENST00000316757 ARAP1Q96P48 1450 aa36.01■■■■□ 3.36
APBA3-201ENST00000316757 CTTNBP2Q8WZ74 1663 aa36■■■■□ 3.35
APBA3-201ENST00000316757 APLP2Q06481 763 aa35.96■■■■□ 3.35
APBA3-201ENST00000316757 AQRO60306 1485 aaKnown RBP eCLIP35.92■■■■□ 3.34
Retrieved 100 of 20,778 RNA–protein pairs in 63 ms