RNA–Protein interactions for RNA: ENST00000555155.5

RCCD1-203, Transcript of RCC1 domain containing 1, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene RCCD1, Length 1,871 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RCCD1-203ENST00000555155 NISCHQ9Y2I1 1504 aa54.8■■■■■ 6.36
RCCD1-203ENST00000555155 CCDC180Q9P1Z9 1646 aa48.07■■■■■ 5.29
RCCD1-203ENST00000555155 ABCC9O60706 1549 aa46.18■■■■■ 4.98
RCCD1-203ENST00000555155 ZCCHC6Q5VYS8 1495 aaKnown RBP45.89■■■■■ 4.94
RCCD1-203ENST00000555155 DCAF8L2P0C7V8 631 aa45.53■■■■■ 4.88
RCCD1-203ENST00000555155 DCAF1Q9Y4B6 1507 aa45.27■■■■■ 4.84
RCCD1-203ENST00000555155 MYO15BQ96JP2 1530 aa45■■■■■ 4.79
RCCD1-203ENST00000555155 NACADO15069 1562 aa44.96■■■■■ 4.79
RCCD1-203ENST00000555155 RB1CC1Q8TDY2 1594 aa44.75■■■■■ 4.75
RCCD1-203ENST00000555155 SHROOM4Q9ULL8 1493 aa44.64■■■■■ 4.74
RCCD1-203ENST00000555155 SCRIBQ14160 1630 aa44.17■■■■■ 4.66
RCCD1-203ENST00000555155 UNC13AQ9UPW8 1703 aa43.83■■■■■ 4.61
RCCD1-203ENST00000555155 BICRAQ9NZM4 1560 aa43.46■■■■■ 4.55
RCCD1-203ENST00000555155 PABPN1Q86U42 306 aaKnown RBP eCLIP43.44■■■■■ 4.54
RCCD1-203ENST00000555155 SUPT5HO00267 1087 aaKnown RBP42.87■■■■■ 4.45
RCCD1-203ENST00000555155 CECR2Q9BXF3 1484 aa42.68■■■■■ 4.42
RCCD1-203ENST00000555155 BAZ1AQ9NRL2 1556 aaPredicted RBP42.35■■■■■ 4.37
RCCD1-203ENST00000555155 MROH2BQ7Z745 1585 aa42.33■■■■■ 4.37
RCCD1-203ENST00000555155 SMARCA4P51532 1647 aa42.27■■■■■ 4.36
RCCD1-203ENST00000555155 RSF1Q96T23 1441 aaPredicted RBP42.25■■■■■ 4.35
RCCD1-203ENST00000555155 EIF4G1Q04637 1599 aaKnown RBP42.19■■■■■ 4.35
RCCD1-203ENST00000555155 WIZO95785 1651 aa41.94■■■■■ 4.3
RCCD1-203ENST00000555155 PEG3Q9GZU2 1588 aa41.78■■■■■ 4.28
RCCD1-203ENST00000555155 ATAD2BQ9ULI0 1458 aa41.77■■■■■ 4.28
RCCD1-203ENST00000555155 CC2D2AQ9P2K1 1620 aa41.75■■■■■ 4.27
RCCD1-203ENST00000555155 SMARCA2P51531 1590 aa41.69■■■■■ 4.26
RCCD1-203ENST00000555155 NCAPD3P42695 1498 aa41.52■■■■■ 4.24
RCCD1-203ENST00000555155 BAZ1BQ9UIG0 1483 aaKnown RBP41.48■■■■■ 4.23
RCCD1-203ENST00000555155 TOP2AP11388 1531 aaKnown RBP41.46■■■■■ 4.23
RCCD1-203ENST00000555155 DNAJC5BQ9UF47 199 aa41.44■■■■■ 4.22
RCCD1-203ENST00000555155 HMGXB3Q12766 1538 aa41.38■■■■■ 4.22
RCCD1-203ENST00000555155 CCDC88BA6NC98 1476 aa41.05■■■■■ 4.16
RCCD1-203ENST00000555155 CHIC1Q5VXU3 224 aa40.89■■■■■ 4.14
RCCD1-203ENST00000555155 CADPSQ9ULU8 1353 aa40.42■■■■■ 4.06
RCCD1-203ENST00000555155 CFTRP13569 1480 aa40.41■■■■■ 4.06
RCCD1-203ENST00000555155 NESP48681 1621 aa40.34■■■■■ 4.05
RCCD1-203ENST00000555155 LAMC3Q9Y6N6 1575 aa40.21■■■■■ 4.03
RCCD1-203ENST00000555155 TRIM41Q8WV44 630 aa40.2■■■■■ 4.03
RCCD1-203ENST00000555155 ABCC8Q09428 1581 aa40.13■■■■■ 4.01
RCCD1-203ENST00000555155 PRDM2Q13029 1718 aa40.08■■■■■ 4.01
RCCD1-203ENST00000555155 FANCD2Q9BXW9 1451 aa39.97■■■■□ 3.99
RCCD1-203ENST00000555155 PDS5BQ9NTI5 1447 aa39.93■■■■□ 3.98
RCCD1-203ENST00000555155 KIF21AQ7Z4S6 1674 aa39.79■■■■□ 3.96
RCCD1-203ENST00000555155 CEP164Q9UPV0 1460 aa39.78■■■■□ 3.96
RCCD1-203ENST00000555155 WRNQ14191 1432 aaPredicted RBP eCLIP39.78■■■■□ 3.96
RCCD1-203ENST00000555155 SYNJ1O43426 1573 aa39.66■■■■□ 3.94
RCCD1-203ENST00000555155 ERCC6Q03468 1493 aa39.64■■■■□ 3.94
RCCD1-203ENST00000555155 FAM9AQ8IZU1 332 aaPredicted RBP39.63■■■■□ 3.93
RCCD1-203ENST00000555155 CUX1P39880 1505 aa39.63■■■■□ 3.93
RCCD1-203ENST00000555155 URB2Q14146 1524 aaKnown RBP39.53■■■■□ 3.92
RCCD1-203ENST00000555155 TOP2BQ02880 1626 aa39.52■■■■□ 3.92
RCCD1-203ENST00000555155 BIVM-ERCC5R4GMW8 1640 aa39.48■■■■□ 3.91
RCCD1-203ENST00000555155 MRC2Q9UBG0 1479 aa39.46■■■■□ 3.91
RCCD1-203ENST00000555155 DNMBPQ6XZF7 1577 aa39.46■■■■□ 3.91
RCCD1-203ENST00000555155 TOPBP1Q92547 1522 aa39.46■■■■□ 3.91
RCCD1-203ENST00000555155 LOC105371045A0A1W2PR82 267 aa39.45■■■■□ 3.91
RCCD1-203ENST00000555155 THOC2Q8NI27 1593 aaKnown RBP39.34■■■■□ 3.89
RCCD1-203ENST00000555155 SOGA1O94964 1423 aa39.32■■■■□ 3.89
RCCD1-203ENST00000555155 FGD5Q6ZNL6 1462 aa39.3■■■■□ 3.88
RCCD1-203ENST00000555155 WDR62O43379 1518 aa39.29■■■■□ 3.88
RCCD1-203ENST00000555155 POLA1P09884 1462 aaPredicted RBP39.22■■■■□ 3.87
RCCD1-203ENST00000555155 EHMT2Q96KQ7 1210 aa39.22■■■■□ 3.87
RCCD1-203ENST00000555155 RUSC2Q8N2Y8 1516 aa39.22■■■■□ 3.87
RCCD1-203ENST00000555155 RAD54L2Q9Y4B4 1467 aa39.11■■■■□ 3.85
RCCD1-203ENST00000555155 CUX2O14529 1486 aa39.04■■■■□ 3.84
RCCD1-203ENST00000555155 EEA1Q15075 1411 aa39.02■■■■□ 3.84
RCCD1-203ENST00000555155 CSRNP3Q8WYN3 585 aa38.94■■■■□ 3.82
RCCD1-203ENST00000555155 TARBP1Q13395 1621 aaKnown RBP38.93■■■■□ 3.82
RCCD1-203ENST00000555155 ABCA10Q8WWZ4 1543 aa38.92■■■■□ 3.82
RCCD1-203ENST00000555155 IFT140Q96RY7 1462 aa38.87■■■■□ 3.81
RCCD1-203ENST00000555155 WDR97A6NE52 1622 aa38.85■■■■□ 3.81
RCCD1-203ENST00000555155 KIF27Q86VH2 1401 aa38.82■■■■□ 3.8
RCCD1-203ENST00000555155 TDRD9Q8NDG6 1382 aaKnown RBP38.79■■■■□ 3.8
RCCD1-203ENST00000555155 ZNF608Q9ULD9 1512 aaPredicted RBP38.73■■■■□ 3.79
RCCD1-203ENST00000555155 AQRO60306 1485 aaKnown RBP eCLIP38.67■■■■□ 3.783e-7■■■■■ 49
RCCD1-203ENST00000555155 ABCA5Q8WWZ7 1642 aa38.66■■■■□ 3.78
RCCD1-203ENST00000555155 GAPVD1Q14C86 1478 aa38.63■■■■□ 3.77
RCCD1-203ENST00000555155 KIF21BO75037 1637 aa38.61■■■■□ 3.77
RCCD1-203ENST00000555155 GOLGA3Q08378 1498 aa38.6■■■■□ 3.77
RCCD1-203ENST00000555155 IGF1RP08069 1367 aa38.58■■■■□ 3.77
RCCD1-203ENST00000555155 EIF4G3O43432 1585 aaKnown RBP38.55■■■■□ 3.76
RCCD1-203ENST00000555155 UBTFP17480 764 aaKnown RBP38.54■■■■□ 3.76
RCCD1-203ENST00000555155 RAPGEF2Q9Y4G8 1499 aa38.51■■■■□ 3.75
RCCD1-203ENST00000555155 ERICH3Q5RHP9 1530 aa38.44■■■■□ 3.74
RCCD1-203ENST00000555155 PBRM1Q86U86 1689 aa38.43■■■■□ 3.74
RCCD1-203ENST00000555155 TNIKQ9UKE5 1360 aa38.43■■■■□ 3.74
RCCD1-203ENST00000555155 GRIN2BQ13224 1484 aa38.43■■■■□ 3.74
RCCD1-203ENST00000555155 PRXQ9BXM0 1461 aa38.43■■■■□ 3.74
RCCD1-203ENST00000555155 CARMIL1Q5VZK9 1371 aa38.36■■■■□ 3.73
RCCD1-203ENST00000555155 CEP162Q5TB80 1403 aa38.32■■■■□ 3.72
RCCD1-203ENST00000555155 CUL7Q14999 1698 aa38.29■■■■□ 3.72
RCCD1-203ENST00000555155 SNAPC4Q5SXM2 1469 aa38.28■■■■□ 3.72
RCCD1-203ENST00000555155 ADAMTS12P58397 1594 aa38.21■■■■□ 3.71
RCCD1-203ENST00000555155 FHAD1B1AJZ9 1412 aa38.19■■■■□ 3.7
RCCD1-203ENST00000555155 MAGI1Q96QZ7 1491 aaPredicted RBP38.18■■■■□ 3.7
RCCD1-203ENST00000555155 RANGAP1P46060 587 aaPredicted RBP38.12■■■■□ 3.69
RCCD1-203ENST00000555155 SYNJ2O15056 1496 aa38.05■■■■□ 3.68
RCCD1-203ENST00000555155 CLIP1P30622 1438 aa38.02■■■■□ 3.68
RCCD1-203ENST00000555155 FBLN2P98095 1184 aa38.02■■■■□ 3.68
RCCD1-203ENST00000555155 CHMP7Q8WUX9 453 aaPredicted RBP38.01■■■■□ 3.68
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms