Protein–RNA interactions for Protein: Q96PZ7

CSMD1, CUB and sushi domain-containing protein 1, humanhuman

Predictions only

Length 3,565 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1Q96PZ7 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
CSMD1Q96PZ7 RUNX2-205ENST00000465038 1770 ntAPPRIS P4 TSL 5 BASIC20.77■□□□□ 0.92
CSMD1Q96PZ7 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CSMD1Q96PZ7 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC20.77■□□□□ 0.92
CSMD1Q96PZ7 QDPR-206ENST00000508623 601 ntTSL 3 BASIC20.77■□□□□ 0.92
CSMD1Q96PZ7 RNF130-205ENST00000521389 2263 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CSMD1Q96PZ7 PARL-206ENST00000435888 1098 ntTSL 5 BASIC20.76■□□□□ 0.91
CSMD1Q96PZ7 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC20.76■□□□□ 0.91
CSMD1Q96PZ7 AC137630.3-201ENST00000607245 391 ntBASIC20.76■□□□□ 0.91
CSMD1Q96PZ7 AC097381.1-201ENST00000429019 1296 ntBASIC20.76■□□□□ 0.91
CSMD1Q96PZ7 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
CSMD1Q96PZ7 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CSMD1Q96PZ7 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC20.75■□□□□ 0.91
CSMD1Q96PZ7 PRR5-202ENST00000336985 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CSMD1Q96PZ7 CUL4A-202ENST00000375440 2364 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CSMD1Q96PZ7 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC20.75■□□□□ 0.91
CSMD1Q96PZ7 KCNF1-201ENST00000295082 2289 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
CSMD1Q96PZ7 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC20.75■□□□□ 0.91
CSMD1Q96PZ7 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
CSMD1Q96PZ7 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
CSMD1Q96PZ7 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CSMD1Q96PZ7 SLC52A2-201ENST00000329994 1896 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CSMD1Q96PZ7 AL359504.2-201ENST00000605506 1601 ntBASIC20.73■□□□□ 0.91
CSMD1Q96PZ7 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
CSMD1Q96PZ7 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
CSMD1Q96PZ7 ANGPTL6-201ENST00000253109 1900 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CSMD1Q96PZ7 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC20.73■□□□□ 0.91
CSMD1Q96PZ7 AC142381.2-201ENST00000566120 298 ntBASIC20.72■□□□□ 0.91
CSMD1Q96PZ7 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC20.72■□□□□ 0.91
CSMD1Q96PZ7 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CSMD1Q96PZ7 COL13A1-210ENST00000517713 2007 ntAPPRIS ALT2 TSL 5 BASIC20.72■□□□□ 0.91
CSMD1Q96PZ7 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC20.72■□□□□ 0.91
CSMD1Q96PZ7 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC20.72■□□□□ 0.91
CSMD1Q96PZ7 PLD4-205ENST00000553861 667 ntTSL 2 BASIC20.72■□□□□ 0.91
CSMD1Q96PZ7 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CSMD1Q96PZ7 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC20.72■□□□□ 0.91
CSMD1Q96PZ7 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC20.72■□□□□ 0.91
CSMD1Q96PZ7 WDR38-202ENST00000613760 1323 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
CSMD1Q96PZ7 TPRA1-209ENST00000489960 1903 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
CSMD1Q96PZ7 LSM4-201ENST00000252816 986 ntTSL 2 BASIC20.71■□□□□ 0.91
CSMD1Q96PZ7 TNFRSF25-204ENST00000356876 1625 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
CSMD1Q96PZ7 DDAH2-212ENST00000375789 1688 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
CSMD1Q96PZ7 DDAH2-213ENST00000375792 1688 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CSMD1Q96PZ7 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CSMD1Q96PZ7 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC20.71■□□□□ 0.91
CSMD1Q96PZ7 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC20.71■□□□□ 0.91
CSMD1Q96PZ7 AC087623.3-201ENST00000607047 1098 ntBASIC20.71■□□□□ 0.91
CSMD1Q96PZ7 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
CSMD1Q96PZ7 GGH-201ENST00000260118 1607 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.91
CSMD1Q96PZ7 MARCH11-201ENST00000332432 1741 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
CSMD1Q96PZ7 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC20.7■□□□□ 0.9
CSMD1Q96PZ7 GABRA5-203ENST00000400081 2761 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
CSMD1Q96PZ7 TMEM158-201ENST00000503771 1813 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
CSMD1Q96PZ7 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC20.7■□□□□ 0.9
CSMD1Q96PZ7 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC20.7■□□□□ 0.9
CSMD1Q96PZ7 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC20.7■□□□□ 0.9
CSMD1Q96PZ7 RASSF1-AS1-201ENST00000629828 790 ntBASIC20.69■□□□□ 0.9
CSMD1Q96PZ7 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC20.69■□□□□ 0.9
CSMD1Q96PZ7 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC20.69■□□□□ 0.9
CSMD1Q96PZ7 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CSMD1Q96PZ7 ANKRD9-204ENST00000559651 1444 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CSMD1Q96PZ7 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC20.69■□□□□ 0.9
CSMD1Q96PZ7 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
CSMD1Q96PZ7 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC20.68■□□□□ 0.9
CSMD1Q96PZ7 TPRA1-202ENST00000355552 1933 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CSMD1Q96PZ7 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC20.68■□□□□ 0.9
CSMD1Q96PZ7 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC20.68■□□□□ 0.9
CSMD1Q96PZ7 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC20.68■□□□□ 0.9
CSMD1Q96PZ7 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC20.68■□□□□ 0.9
CSMD1Q96PZ7 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
CSMD1Q96PZ7 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC20.67■□□□□ 0.9
CSMD1Q96PZ7 ABCB10P3-201ENST00000561950 2166 ntBASIC20.67■□□□□ 0.9
CSMD1Q96PZ7 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC20.67■□□□□ 0.9
CSMD1Q96PZ7 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC20.67■□□□□ 0.9
CSMD1Q96PZ7 DENND3-207ENST00000518347 850 ntTSL 2 BASIC20.67■□□□□ 0.9
CSMD1Q96PZ7 CPSF4-207ENST00000451876 1644 ntTSL 5 BASIC20.67■□□□□ 0.9
CSMD1Q96PZ7 KRT18P24-201ENST00000344739 1156 ntBASIC20.67■□□□□ 0.9
CSMD1Q96PZ7 GLI3-203ENST00000437480 451 ntTSL 2 BASIC20.67■□□□□ 0.9
CSMD1Q96PZ7 OXLD1-203ENST00000571503 803 ntTSL 2 BASIC20.67■□□□□ 0.9
CSMD1Q96PZ7 CASTOR2-201ENST00000616305 1257 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CSMD1Q96PZ7 HDGF-210ENST00000537739 2073 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CSMD1Q96PZ7 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC20.67■□□□□ 0.9
CSMD1Q96PZ7 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC20.66■□□□□ 0.9
CSMD1Q96PZ7 RCCD1-206ENST00000556618 1556 ntAPPRIS P2 TSL 5 BASIC20.66■□□□□ 0.9
CSMD1Q96PZ7 GAL3ST2-201ENST00000192314 1370 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CSMD1Q96PZ7 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CSMD1Q96PZ7 LRRC10B-201ENST00000378075 2219 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
CSMD1Q96PZ7 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
CSMD1Q96PZ7 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC20.66■□□□□ 0.9
CSMD1Q96PZ7 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC20.66■□□□□ 0.9
CSMD1Q96PZ7 SLC39A2-201ENST00000298681 1379 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CSMD1Q96PZ7 FKBP1A-211ENST00000618612 1518 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
CSMD1Q96PZ7 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CSMD1Q96PZ7 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
CSMD1Q96PZ7 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
CSMD1Q96PZ7 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC20.65■□□□□ 0.9
CSMD1Q96PZ7 TMEM268-201ENST00000288502 2314 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
CSMD1Q96PZ7 SYT12-205ENST00000527043 1661 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CSMD1Q96PZ7 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
CSMD1Q96PZ7 CCZ1B-215ENST00000626257 2211 ntTSL 2 BASIC20.64■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 72.9 ms