RNA–Protein interactions for RNA: ENST00000557334.5

KRAS-204, Transcript of KRAS proto-oncogene, GTPase, humanhuman

TSL 5 BASIC

Gene KRAS, Length 1,052 nt, Biotype protein coding, Subcellular localisation Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KRAS-204ENST00000557334 NISCHQ9Y2I1 1504 aa55.93■■■■■ 6.54
KRAS-204ENST00000557334 CCDC180Q9P1Z9 1646 aa49.84■■■■■ 5.57
KRAS-204ENST00000557334 ABCC9O60706 1549 aa49.48■■■■■ 5.51
KRAS-204ENST00000557334 RB1CC1Q8TDY2 1594 aa47.24■■■■■ 5.15
KRAS-204ENST00000557334 DCAF8L2P0C7V8 631 aa47.2■■■■■ 5.15
KRAS-204ENST00000557334 NACADO15069 1562 aa47.05■■■■■ 5.12
KRAS-204ENST00000557334 MYO15BQ96JP2 1530 aa46.54■■■■■ 5.04
KRAS-204ENST00000557334 ZCCHC6Q5VYS8 1495 aaKnown RBP46.45■■■■■ 5.03
KRAS-204ENST00000557334 PABPN1Q86U42 306 aaKnown RBP eCLIP46.24■■■■■ 4.99
KRAS-204ENST00000557334 DCAF1Q9Y4B6 1507 aa46.18■■■■■ 4.98
KRAS-204ENST00000557334 UNC13AQ9UPW8 1703 aa46.11■■■■■ 4.97
KRAS-204ENST00000557334 DNAJC5BQ9UF47 199 aa45.97■■■■■ 4.95
KRAS-204ENST00000557334 BICRAQ9NZM4 1560 aa45.85■■■■■ 4.93
KRAS-204ENST00000557334 SCRIBQ14160 1630 aa45.57■■■■■ 4.89
KRAS-204ENST00000557334 SHROOM4Q9ULL8 1493 aa45.21■■■■■ 4.83
KRAS-204ENST00000557334 EIF4G1Q04637 1599 aaKnown RBP44.69■■■■■ 4.75
KRAS-204ENST00000557334 CC2D2AQ9P2K1 1620 aa44.66■■■■■ 4.74
KRAS-204ENST00000557334 CECR2Q9BXF3 1484 aa44.48■■■■■ 4.71
KRAS-204ENST00000557334 SMARCA4P51532 1647 aa43.48■■■■■ 4.55
KRAS-204ENST00000557334 NCAPD3P42695 1498 aa43.47■■■■■ 4.55
KRAS-204ENST00000557334 ATAD2BQ9ULI0 1458 aa43.44■■■■■ 4.54
KRAS-204ENST00000557334 BAZ1AQ9NRL2 1556 aaPredicted RBP43.37■■■■■ 4.53
KRAS-204ENST00000557334 SMARCA2P51531 1590 aa43.29■■■■■ 4.52
KRAS-204ENST00000557334 HMGXB3Q12766 1538 aa43.14■■■■■ 4.5
KRAS-204ENST00000557334 MROH2BQ7Z745 1585 aa43.14■■■■■ 4.5
KRAS-204ENST00000557334 BAZ1BQ9UIG0 1483 aaKnown RBP43.05■■■■■ 4.48
KRAS-204ENST00000557334 PEG3Q9GZU2 1588 aa43.02■■■■■ 4.48
KRAS-204ENST00000557334 NESP48681 1621 aa42.66■■■■■ 4.42
KRAS-204ENST00000557334 ERCC6Q03468 1493 aa42.66■■■■■ 4.42
KRAS-204ENST00000557334 WIZO95785 1651 aa42.63■■■■■ 4.42
KRAS-204ENST00000557334 RSF1Q96T23 1441 aaPredicted RBP42.46■■■■■ 4.39
KRAS-204ENST00000557334 LAMC3Q9Y6N6 1575 aa42.35■■■■■ 4.37
KRAS-204ENST00000557334 CUX2O14529 1486 aa42.32■■■■■ 4.37
KRAS-204ENST00000557334 CADPSQ9ULU8 1353 aa42.22■■■■■ 4.35
KRAS-204ENST00000557334 PDS5BQ9NTI5 1447 aa42.16■■■■■ 4.34
KRAS-204ENST00000557334 TOP2AP11388 1531 aaKnown RBP42.1■■■■■ 4.33
KRAS-204ENST00000557334 KIF21AQ7Z4S6 1674 aa42.03■■■■■ 4.32
KRAS-204ENST00000557334 THOC2Q8NI27 1593 aaKnown RBP42.01■■■■■ 4.32
KRAS-204ENST00000557334 CFTRP13569 1480 aa41.82■■■■■ 4.29
KRAS-204ENST00000557334 DNAJC5Q9H3Z4 198 aa41.76■■■■■ 4.28
KRAS-204ENST00000557334 MRC2Q9UBG0 1479 aa41.74■■■■■ 4.27
KRAS-204ENST00000557334 FANCD2Q9BXW9 1451 aa41.72■■■■■ 4.27
KRAS-204ENST00000557334 CCDC88BA6NC98 1476 aa41.69■■■■■ 4.26
KRAS-204ENST00000557334 CEP164Q9UPV0 1460 aa41.69■■■■■ 4.26
KRAS-204ENST00000557334 WDR62O43379 1518 aa41.59■■■■■ 4.25
KRAS-204ENST00000557334 URB2Q14146 1524 aaKnown RBP41.34■■■■■ 4.21
KRAS-204ENST00000557334 PRDM2Q13029 1718 aa41.3■■■■■ 4.2
KRAS-204ENST00000557334 SUPT5HO00267 1087 aaKnown RBP41.15■■■■■ 4.18
KRAS-204ENST00000557334 TOPBP1Q92547 1522 aa40.98■■■■■ 4.15
KRAS-204ENST00000557334 ABCC8Q09428 1581 aa40.91■■■■■ 4.14
KRAS-204ENST00000557334 DNMBPQ6XZF7 1577 aa40.85■■■■■ 4.13
KRAS-204ENST00000557334 IFT140Q96RY7 1462 aa40.84■■■■■ 4.13
KRAS-204ENST00000557334 ZNF608Q9ULD9 1512 aaPredicted RBP40.76■■■■■ 4.12
KRAS-204ENST00000557334 OSCARQ8IYS5 282 aa40.61■■■■■ 4.09
KRAS-204ENST00000557334 POLA1P09884 1462 aaPredicted RBP40.6■■■■■ 4.09
KRAS-204ENST00000557334 TARBP1Q13395 1621 aaKnown RBP40.54■■■■■ 4.08
KRAS-204ENST00000557334 AQRO60306 1485 aaKnown RBP eCLIP40.5■■■■■ 4.07
KRAS-204ENST00000557334 RAD54L2Q9Y4B4 1467 aa40.5■■■■■ 4.07
KRAS-204ENST00000557334 EIF4G3O43432 1585 aaKnown RBP40.48■■■■■ 4.07
KRAS-204ENST00000557334 CUX1P39880 1505 aa40.48■■■■■ 4.07
KRAS-204ENST00000557334 SOGA1O94964 1423 aa40.48■■■■■ 4.07
KRAS-204ENST00000557334 FGD5Q6ZNL6 1462 aa40.44■■■■■ 4.06
KRAS-204ENST00000557334 TDRD9Q8NDG6 1382 aaKnown RBP40.35■■■■■ 4.05
KRAS-204ENST00000557334 TRIM41Q8WV44 630 aa40.25■■■■■ 4.03
KRAS-204ENST00000557334 FBLN2P98095 1184 aa40.19■■■■■ 4.02
KRAS-204ENST00000557334 WDR97A6NE52 1622 aa40.09■■■■■ 4.01
KRAS-204ENST00000557334 CHD1O14646 1710 aa40.06■■■■■ 4
KRAS-204ENST00000557334 WRNQ14191 1432 aaPredicted RBP eCLIP40.05■■■■■ 4
KRAS-204ENST00000557334 SNAPC4Q5SXM2 1469 aa40.05■■■■■ 4
KRAS-204ENST00000557334 GRIN2BQ13224 1484 aa40.01■■■■■ 4
KRAS-204ENST00000557334 ABCA10Q8WWZ4 1543 aa39.98■■■■□ 3.99
KRAS-204ENST00000557334 GAPVD1Q14C86 1478 aa39.97■■■■□ 3.99
KRAS-204ENST00000557334 SYNJ1O43426 1573 aa39.96■■■■□ 3.99
KRAS-204ENST00000557334 TOP2BQ02880 1626 aa39.95■■■■□ 3.99
KRAS-204ENST00000557334 CHMP7Q8WUX9 453 aaPredicted RBP39.95■■■■□ 3.99
KRAS-204ENST00000557334 BIVM-ERCC5R4GMW8 1640 aa39.92■■■■□ 3.98
KRAS-204ENST00000557334 MAGI1Q96QZ7 1491 aaPredicted RBP39.92■■■■□ 3.98
KRAS-204ENST00000557334 RIMBP3CA6NJZ7 1639 aa39.91■■■■□ 3.98
KRAS-204ENST00000557334 RIMBP3BA6NNM3 1639 aa39.91■■■■□ 3.98
KRAS-204ENST00000557334 RIMBP3Q9UFD9 1639 aa39.91■■■■□ 3.98
KRAS-204ENST00000557334 ARHGEF11O15085 1522 aa39.86■■■■□ 3.97
KRAS-204ENST00000557334 ABCA5Q8WWZ7 1642 aa39.83■■■■□ 3.97
KRAS-204ENST00000557334 PBRM1Q86U86 1689 aa39.82■■■■□ 3.96
KRAS-204ENST00000557334 SYNJ2O15056 1496 aa39.81■■■■□ 3.96
KRAS-204ENST00000557334 CYB5RLQ6IPT4 315 aa39.66■■■■□ 3.94
KRAS-204ENST00000557334 CLASP1Q7Z460 1538 aa39.64■■■■□ 3.94
KRAS-204ENST00000557334 ARAP1Q96P48 1450 aa39.51■■■■□ 3.92
KRAS-204ENST00000557334 ADAMTS12P58397 1594 aa39.5■■■■□ 3.91
KRAS-204ENST00000557334 GRIN2AQ12879 1464 aa39.49■■■■□ 3.91
KRAS-204ENST00000557334 ERICH3Q5RHP9 1530 aa39.48■■■■□ 3.91
KRAS-204ENST00000557334 FHAD1B1AJZ9 1412 aa39.48■■■■□ 3.91
KRAS-204ENST00000557334 NUP160Q12769 1436 aa39.32■■■■□ 3.89
KRAS-204ENST00000557334 CEP170Q5SW79 1584 aa39.31■■■■□ 3.88
KRAS-204ENST00000557334 KIF27Q86VH2 1401 aa39.24■■■■□ 3.87
KRAS-204ENST00000557334 IGF1RP08069 1367 aa39.21■■■■□ 3.87
KRAS-204ENST00000557334 ERCC6L2Q5T890 1561 aa39.12■■■■□ 3.85
KRAS-204ENST00000557334 TRHP20396 242 aaPredicted RBP39.05■■■■□ 3.84
KRAS-204ENST00000557334 SHROOM2Q13796 1616 aa39.03■■■■□ 3.84
KRAS-204ENST00000557334 JPH4Q96JJ6 628 aa39.03■■■■□ 3.84
KRAS-204ENST00000557334 CUL7Q14999 1698 aa38.98■■■■□ 3.83
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms