RNA–Protein interactions for RNA: ENST00000309276.10

PPM1J-201, Transcript of protein phosphatase, Mg2+/Mn2+ dependent 1J, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PPM1J, Length 1,863 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPM1J-201ENST00000309276 NISCHQ9Y2I1 1504 aa56.97■■■■■ 6.71
PPM1J-201ENST00000309276 CCDC180Q9P1Z9 1646 aa50.55■■■■■ 5.68
PPM1J-201ENST00000309276 ABCC9O60706 1549 aa49.04■■■■■ 5.44
PPM1J-201ENST00000309276 ZCCHC6Q5VYS8 1495 aaKnown RBP47.55■■■■■ 5.2
PPM1J-201ENST00000309276 DCAF8L2P0C7V8 631 aa47.39■■■■■ 5.18
PPM1J-201ENST00000309276 NACADO15069 1562 aa47.37■■■■■ 5.17
PPM1J-201ENST00000309276 RB1CC1Q8TDY2 1594 aa47.35■■■■■ 5.17
PPM1J-201ENST00000309276 MYO15BQ96JP2 1530 aa47.2■■■■■ 5.15
PPM1J-201ENST00000309276 DCAF1Q9Y4B6 1507 aa47.15■■■■■ 5.14
PPM1J-201ENST00000309276 UNC13AQ9UPW8 1703 aa46.42■■■■■ 5.02
PPM1J-201ENST00000309276 SCRIBQ14160 1630 aa46.14■■■■■ 4.98
PPM1J-201ENST00000309276 BICRAQ9NZM4 1560 aa45.94■■■■■ 4.94
PPM1J-201ENST00000309276 PABPN1Q86U42 306 aaKnown RBP eCLIP45.85■■■■■ 4.93
PPM1J-201ENST00000309276 SHROOM4Q9ULL8 1493 aa45.41■■■■■ 4.86
PPM1J-201ENST00000309276 EIF4G1Q04637 1599 aaKnown RBP44.67■■■■■ 4.74
PPM1J-201ENST00000309276 DNAJC5BQ9UF47 199 aa44.64■■■■■ 4.74
PPM1J-201ENST00000309276 CC2D2AQ9P2K1 1620 aa44.41■■■■■ 4.7
PPM1J-201ENST00000309276 CECR2Q9BXF3 1484 aa44.35■■■■■ 4.69
PPM1J-201ENST00000309276 SMARCA4P51532 1647 aa44.17■■■■■ 4.66
PPM1J-201ENST00000309276 BAZ1AQ9NRL2 1556 aaPredicted RBP44.14■■■■■ 4.66
PPM1J-201ENST00000309276 MROH2BQ7Z745 1585 aa43.93■■■■■ 4.62
PPM1J-201ENST00000309276 ATAD2BQ9ULI0 1458 aa43.78■■■■■ 4.6
PPM1J-201ENST00000309276 SMARCA2P51531 1590 aa43.76■■■■■ 4.6
PPM1J-201ENST00000309276 PEG3Q9GZU2 1588 aa43.71■■■■■ 4.59
PPM1J-201ENST00000309276 NCAPD3P42695 1498 aa43.68■■■■■ 4.58
PPM1J-201ENST00000309276 HMGXB3Q12766 1538 aa43.54■■■■■ 4.56
PPM1J-201ENST00000309276 RSF1Q96T23 1441 aaPredicted RBP43.53■■■■■ 4.56
PPM1J-201ENST00000309276 WIZO95785 1651 aa43.53■■■■■ 4.56
PPM1J-201ENST00000309276 BAZ1BQ9UIG0 1483 aaKnown RBP43.44■■■■■ 4.55
PPM1J-201ENST00000309276 TOP2AP11388 1531 aaKnown RBP43.04■■■■■ 4.48
PPM1J-201ENST00000309276 SUPT5HO00267 1087 aaKnown RBP42.7■■■■■ 4.43
PPM1J-201ENST00000309276 NESP48681 1621 aa42.56■■■■■ 4.4
PPM1J-201ENST00000309276 CCDC88BA6NC98 1476 aa42.52■■■■■ 4.4
PPM1J-201ENST00000309276 LAMC3Q9Y6N6 1575 aa42.51■■■■■ 4.4
PPM1J-201ENST00000309276 CADPSQ9ULU8 1353 aa42.42■■■■■ 4.38
PPM1J-201ENST00000309276 CFTRP13569 1480 aa42.26■■■■■ 4.36
PPM1J-201ENST00000309276 ERCC6Q03468 1493 aa42.21■■■■■ 4.35
PPM1J-201ENST00000309276 PDS5BQ9NTI5 1447 aa42.16■■■■■ 4.34
PPM1J-201ENST00000309276 KIF21AQ7Z4S6 1674 aa42.15■■■■■ 4.34
PPM1J-201ENST00000309276 PRDM2Q13029 1718 aa42.13■■■■■ 4.34
PPM1J-201ENST00000309276 FANCD2Q9BXW9 1451 aa41.96■■■■■ 4.31
PPM1J-201ENST00000309276 THOC2Q8NI27 1593 aaKnown RBP41.87■■■■■ 4.29
PPM1J-201ENST00000309276 CEP164Q9UPV0 1460 aa41.87■■■■■ 4.29
PPM1J-201ENST00000309276 MRC2Q9UBG0 1479 aa41.73■■■■■ 4.27
PPM1J-201ENST00000309276 CUX2O14529 1486 aa41.63■■■■■ 4.25
PPM1J-201ENST00000309276 WDR62O43379 1518 aa41.6■■■■■ 4.25
PPM1J-201ENST00000309276 URB2Q14146 1524 aaKnown RBP41.54■■■■■ 4.24
PPM1J-201ENST00000309276 DNMBPQ6XZF7 1577 aa41.35■■■■■ 4.21
PPM1J-201ENST00000309276 TOPBP1Q92547 1522 aa41.35■■■■■ 4.21
PPM1J-201ENST00000309276 ABCC8Q09428 1581 aa41.34■■■■■ 4.21
PPM1J-201ENST00000309276 CUX1P39880 1505 aa41.2■■■■■ 4.19
PPM1J-201ENST00000309276 WRNQ14191 1432 aaPredicted RBP eCLIP41.03■■■■■ 4.16
PPM1J-201ENST00000309276 POLA1P09884 1462 aaPredicted RBP41.02■■■■■ 4.16
PPM1J-201ENST00000309276 FGD5Q6ZNL6 1462 aa40.98■■■■■ 4.15
PPM1J-201ENST00000309276 BIVM-ERCC5R4GMW8 1640 aa40.98■■■■■ 4.15
PPM1J-201ENST00000309276 SYNJ1O43426 1573 aa40.97■■■■■ 4.15
PPM1J-201ENST00000309276 IFT140Q96RY7 1462 aa40.96■■■■■ 4.15
PPM1J-201ENST00000309276 TOP2BQ02880 1626 aa40.95■■■■■ 4.15
PPM1J-201ENST00000309276 TARBP1Q13395 1621 aaKnown RBP40.91■■■■■ 4.14
PPM1J-201ENST00000309276 RAD54L2Q9Y4B4 1467 aa40.84■■■■■ 4.13
PPM1J-201ENST00000309276 SOGA1O94964 1423 aa40.83■■■■■ 4.13
PPM1J-201ENST00000309276 ZNF608Q9ULD9 1512 aaPredicted RBP40.77■■■■■ 4.12
PPM1J-201ENST00000309276 WDR97A6NE52 1622 aa40.71■■■■■ 4.11
PPM1J-201ENST00000309276 EIF4G3O43432 1585 aaKnown RBP40.68■■■■■ 4.1
PPM1J-201ENST00000309276 ABCA10Q8WWZ4 1543 aa40.59■■■■■ 4.09
PPM1J-201ENST00000309276 AQRO60306 1485 aaKnown RBP eCLIP40.58■■■■■ 4.093e-6■■■■□ 21.2
PPM1J-201ENST00000309276 TDRD9Q8NDG6 1382 aaKnown RBP40.55■■■■■ 4.08
PPM1J-201ENST00000309276 ABCA5Q8WWZ7 1642 aa40.45■■■■■ 4.07
PPM1J-201ENST00000309276 GAPVD1Q14C86 1478 aa40.38■■■■■ 4.05
PPM1J-201ENST00000309276 PBRM1Q86U86 1689 aa40.38■■■■■ 4.05
PPM1J-201ENST00000309276 GRIN2BQ13224 1484 aa40.32■■■■■ 4.04
PPM1J-201ENST00000309276 TRIM41Q8WV44 630 aa40.3■■■■■ 4.04
PPM1J-201ENST00000309276 SNAPC4Q5SXM2 1469 aa40.23■■■■■ 4.03
PPM1J-201ENST00000309276 MAGI1Q96QZ7 1491 aaPredicted RBP40.18■■■■■ 4.02
PPM1J-201ENST00000309276 CHD1O14646 1710 aa40.14■■■■■ 4.02
PPM1J-201ENST00000309276 KIF27Q86VH2 1401 aa40.13■■■■■ 4.01
PPM1J-201ENST00000309276 ERICH3Q5RHP9 1530 aa40.12■■■■■ 4.01
PPM1J-201ENST00000309276 CHIC1Q5VXU3 224 aa40.08■■■■■ 4.01
PPM1J-201ENST00000309276 ADAMTS12P58397 1594 aa40.03■■■■■ 4
PPM1J-201ENST00000309276 SYNJ2O15056 1496 aa40.02■■■■■ 4
PPM1J-201ENST00000309276 FBLN2P98095 1184 aa39.98■■■■□ 3.99
PPM1J-201ENST00000309276 RUSC2Q8N2Y8 1516 aa39.94■■■■□ 3.98
PPM1J-201ENST00000309276 OSCARQ8IYS5 282 aa39.93■■■■□ 3.98
PPM1J-201ENST00000309276 CHMP7Q8WUX9 453 aaPredicted RBP39.93■■■■□ 3.98
PPM1J-201ENST00000309276 IGF1RP08069 1367 aa39.92■■■■□ 3.98
PPM1J-201ENST00000309276 FHAD1B1AJZ9 1412 aa39.91■■■■□ 3.98
PPM1J-201ENST00000309276 CUL7Q14999 1698 aa39.87■■■■□ 3.97
PPM1J-201ENST00000309276 DNAJC5Q9H3Z4 198 aa39.87■■■■□ 3.97
PPM1J-201ENST00000309276 GRIN2AQ12879 1464 aa39.82■■■■□ 3.96
PPM1J-201ENST00000309276 CARMIL1Q5VZK9 1371 aa39.69■■■■□ 3.94
PPM1J-201ENST00000309276 CLASP1Q7Z460 1538 aa39.64■■■■□ 3.94
PPM1J-201ENST00000309276 CEP170Q5SW79 1584 aa39.64■■■■□ 3.94
PPM1J-201ENST00000309276 EEA1Q15075 1411 aa39.61■■■■□ 3.93
PPM1J-201ENST00000309276 NUP160Q12769 1436 aa39.61■■■■□ 3.93
PPM1J-201ENST00000309276 RAPGEF2Q9Y4G8 1499 aa39.52■■■■□ 3.92
PPM1J-201ENST00000309276 CSRNP3Q8WYN3 585 aa39.49■■■■□ 3.91
PPM1J-201ENST00000309276 PRXQ9BXM0 1461 aa39.48■■■■□ 3.91
PPM1J-201ENST00000309276 FAM9AQ8IZU1 332 aaPredicted RBP39.47■■■■□ 3.91
PPM1J-201ENST00000309276 RIMBP3CA6NJZ7 1639 aa39.35■■■■□ 3.89
PPM1J-201ENST00000309276 RIMBP3BA6NNM3 1639 aa39.35■■■■□ 3.89
Retrieved 100 of 20,778 RNA–protein pairs in 7.1 ms