RNA–Protein interactions for RNA: ENST00000435888.5

PARL-206, Transcript of presenilin associated rhomboid like, humanhuman

TSL 5 BASIC

Gene PARL, Length 1,098 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PARL-206ENST00000435888 NISCHQ9Y2I1 1504 aa54.27■■■■■ 6.28
PARL-206ENST00000435888 ABCC9O60706 1549 aa49.43■■■■■ 5.5
PARL-206ENST00000435888 CCDC180Q9P1Z9 1646 aa48.83■■■■■ 5.41
PARL-206ENST00000435888 RB1CC1Q8TDY2 1594 aa46.82■■■■■ 5.09
PARL-206ENST00000435888 DNAJC5BQ9UF47 199 aa46.78■■■■■ 5.08
PARL-206ENST00000435888 NACADO15069 1562 aa46.39■■■■■ 5.02
PARL-206ENST00000435888 DCAF8L2P0C7V8 631 aa46.2■■■■■ 4.99
PARL-206ENST00000435888 PABPN1Q86U42 306 aaKnown RBP eCLIP46■■■■■ 4.95
PARL-206ENST00000435888 MYO15BQ96JP2 1530 aa45.59■■■■■ 4.89
PARL-206ENST00000435888 UNC13AQ9UPW8 1703 aa45.49■■■■■ 4.87
PARL-206ENST00000435888 BICRAQ9NZM4 1560 aa45.37■■■■■ 4.85
PARL-206ENST00000435888 ZCCHC6Q5VYS8 1495 aaKnown RBP44.86■■■■■ 4.77
PARL-206ENST00000435888 SHROOM4Q9ULL8 1493 aa44.86■■■■■ 4.77
PARL-206ENST00000435888 DCAF1Q9Y4B6 1507 aa44.8■■■■■ 4.76
PARL-206ENST00000435888 CECR2Q9BXF3 1484 aa44.61■■■■■ 4.73
PARL-206ENST00000435888 CC2D2AQ9P2K1 1620 aa44.56■■■■■ 4.72
PARL-206ENST00000435888 SCRIBQ14160 1630 aa44.5■■■■■ 4.71
PARL-206ENST00000435888 EIF4G1Q04637 1599 aaKnown RBP44.37■■■■■ 4.69
PARL-206ENST00000435888 DNAJC5Q9H3Z4 198 aa43.42■■■■■ 4.54
PARL-206ENST00000435888 NCAPD3P42695 1498 aa42.86■■■■■ 4.45
PARL-206ENST00000435888 CUX2O14529 1486 aa42.85■■■■■ 4.45
PARL-206ENST00000435888 ERCC6Q03468 1493 aa42.8■■■■■ 4.44
PARL-206ENST00000435888 ATAD2BQ9ULI0 1458 aa42.64■■■■■ 4.42
PARL-206ENST00000435888 SMARCA2P51531 1590 aa42.5■■■■■ 4.39
PARL-206ENST00000435888 HMGXB3Q12766 1538 aa42.45■■■■■ 4.39
PARL-206ENST00000435888 SMARCA4P51532 1647 aa42.39■■■■■ 4.38
PARL-206ENST00000435888 NESP48681 1621 aa42.27■■■■■ 4.36
PARL-206ENST00000435888 BAZ1BQ9UIG0 1483 aaKnown RBP42.23■■■■■ 4.35
PARL-206ENST00000435888 BAZ1AQ9NRL2 1556 aaPredicted RBP42.18■■■■■ 4.34
PARL-206ENST00000435888 PEG3Q9GZU2 1588 aa41.99■■■■■ 4.31
PARL-206ENST00000435888 LAMC3Q9Y6N6 1575 aa41.93■■■■■ 4.3
PARL-206ENST00000435888 THOC2Q8NI27 1593 aaKnown RBP41.89■■■■■ 4.3
PARL-206ENST00000435888 PDS5BQ9NTI5 1447 aa41.82■■■■■ 4.29
PARL-206ENST00000435888 MROH2BQ7Z745 1585 aa41.78■■■■■ 4.28
PARL-206ENST00000435888 KIF21AQ7Z4S6 1674 aa41.6■■■■■ 4.25
PARL-206ENST00000435888 CADPSQ9ULU8 1353 aa41.57■■■■■ 4.25
PARL-206ENST00000435888 MRC2Q9UBG0 1479 aa41.42■■■■■ 4.22
PARL-206ENST00000435888 TRIM41Q8WV44 630 aa41.35■■■■■ 4.21
PARL-206ENST00000435888 WDR62O43379 1518 aa41.28■■■■■ 4.2
PARL-206ENST00000435888 WIZO95785 1651 aa41.2■■■■■ 4.19
PARL-206ENST00000435888 CEP164Q9UPV0 1460 aa41.16■■■■■ 4.18
PARL-206ENST00000435888 FANCD2Q9BXW9 1451 aa41.07■■■■■ 4.16
PARL-206ENST00000435888 CFTRP13569 1480 aa40.95■■■■■ 4.15
PARL-206ENST00000435888 OSCARQ8IYS5 282 aa40.9■■■■■ 4.14
PARL-206ENST00000435888 RSF1Q96T23 1441 aaPredicted RBP40.79■■■■■ 4.12
PARL-206ENST00000435888 TOP2AP11388 1531 aaKnown RBP40.72■■■■■ 4.11
PARL-206ENST00000435888 URB2Q14146 1524 aaKnown RBP40.7■■■■■ 4.11
PARL-206ENST00000435888 IFT140Q96RY7 1462 aa40.38■■■■■ 4.05
PARL-206ENST00000435888 CCDC88BA6NC98 1476 aa40.29■■■■■ 4.04
PARL-206ENST00000435888 ZNF608Q9ULD9 1512 aaPredicted RBP40.29■■■■■ 4.04
PARL-206ENST00000435888 PRDM2Q13029 1718 aa40.27■■■■■ 4.04
PARL-206ENST00000435888 RIMBP3CA6NJZ7 1639 aa40.22■■■■■ 4.03
PARL-206ENST00000435888 RIMBP3BA6NNM3 1639 aa40.22■■■■■ 4.03
PARL-206ENST00000435888 RIMBP3Q9UFD9 1639 aa40.22■■■■■ 4.03
PARL-206ENST00000435888 TOPBP1Q92547 1522 aa40.2■■■■■ 4.03
PARL-206ENST00000435888 ABCC8Q09428 1581 aa40.15■■■■■ 4.02
PARL-206ENST00000435888 ARHGEF11O15085 1522 aa40.11■■■■■ 4.01
PARL-206ENST00000435888 EIF4G3O43432 1585 aaKnown RBP40■■■■□ 3.99
PARL-206ENST00000435888 DNMBPQ6XZF7 1577 aa39.99■■■■□ 3.99
PARL-206ENST00000435888 CYB5RLQ6IPT4 315 aa39.96■■■■□ 3.99
PARL-206ENST00000435888 AQRO60306 1485 aaKnown RBP eCLIP39.9■■■■□ 3.98
PARL-206ENST00000435888 FBLN2P98095 1184 aa39.86■■■■□ 3.97
PARL-206ENST00000435888 TARBP1Q13395 1621 aaKnown RBP39.8■■■■□ 3.96
PARL-206ENST00000435888 POLA1P09884 1462 aaPredicted RBP39.76■■■■□ 3.96
PARL-206ENST00000435888 TRHP20396 242 aaPredicted RBP39.72■■■■□ 3.95
PARL-206ENST00000435888 CHD1O14646 1710 aa39.71■■■■□ 3.95
PARL-206ENST00000435888 ARAP1Q96P48 1450 aa39.68■■■■□ 3.94
PARL-206ENST00000435888 SOGA1O94964 1423 aa39.64■■■■□ 3.94
PARL-206ENST00000435888 RAD54L2Q9Y4B4 1467 aa39.62■■■■□ 3.93
PARL-206ENST00000435888 TDRD9Q8NDG6 1382 aaKnown RBP39.61■■■■□ 3.93
PARL-206ENST00000435888 CHMP7Q8WUX9 453 aaPredicted RBP39.49■■■■□ 3.91
PARL-206ENST00000435888 SNAPC4Q5SXM2 1469 aa39.48■■■■□ 3.91
PARL-206ENST00000435888 FGD5Q6ZNL6 1462 aa39.44■■■■□ 3.9
PARL-206ENST00000435888 WDR97A6NE52 1622 aa39.43■■■■□ 3.9
PARL-206ENST00000435888 MAGI1Q96QZ7 1491 aaPredicted RBP39.37■■■■□ 3.89
PARL-206ENST00000435888 SYNJ1O43426 1573 aa39.34■■■■□ 3.89
PARL-206ENST00000435888 GRIN2BQ13224 1484 aa39.34■■■■□ 3.89
PARL-206ENST00000435888 CLASP1Q7Z460 1538 aa39.34■■■■□ 3.89
PARL-206ENST00000435888 CUX1P39880 1505 aa39.29■■■■□ 3.88
PARL-206ENST00000435888 SYNJ2O15056 1496 aa39.25■■■■□ 3.87
PARL-206ENST00000435888 GAPVD1Q14C86 1478 aa39.12■■■■□ 3.85
PARL-206ENST00000435888 AEBP2Q6ZN18 517 aaPredicted RBP38.98■■■■□ 3.83
PARL-206ENST00000435888 ABCA10Q8WWZ4 1543 aa38.98■■■■□ 3.83
PARL-206ENST00000435888 PBRM1Q86U86 1689 aa38.96■■■■□ 3.83
PARL-206ENST00000435888 ABCA5Q8WWZ7 1642 aa38.88■■■■□ 3.81
PARL-206ENST00000435888 WRNQ14191 1432 aaPredicted RBP eCLIP38.8■■■■□ 3.8
PARL-206ENST00000435888 GRIN2AQ12879 1464 aa38.79■■■■□ 3.8
PARL-206ENST00000435888 SUPT5HO00267 1087 aaKnown RBP38.71■■■■□ 3.79
PARL-206ENST00000435888 NUP160Q12769 1436 aa38.69■■■■□ 3.78
PARL-206ENST00000435888 ERCC6L2Q5T890 1561 aa38.65■■■■□ 3.78
PARL-206ENST00000435888 ADAMTS12P58397 1594 aa38.65■■■■□ 3.78
PARL-206ENST00000435888 FHAD1B1AJZ9 1412 aa38.63■■■■□ 3.78
PARL-206ENST00000435888 CEP170Q5SW79 1584 aa38.62■■■■□ 3.77
PARL-206ENST00000435888 TOP2BQ02880 1626 aa38.52■■■■□ 3.76
PARL-206ENST00000435888 ERICH3Q5RHP9 1530 aa38.48■■■■□ 3.75
PARL-206ENST00000435888 SHROOM2Q13796 1616 aa38.47■■■■□ 3.75
PARL-206ENST00000435888 BIVM-ERCC5R4GMW8 1640 aa38.47■■■■□ 3.75
PARL-206ENST00000435888 PRG4Q92954 1404 aaPredicted RBP38.39■■■■□ 3.74
PARL-206ENST00000435888 JPH4Q96JJ6 628 aa38.38■■■■□ 3.73
PARL-206ENST00000435888 NPM1P06748 294 aaKnown RBP eCLIP38.25■■■■□ 3.71
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms