RNA–Protein interactions for RNA: ENST00000553861.1

PLD4-205, Transcript of phospholipase D family member 4, humanhuman

TSL 2 BASIC

Gene PLD4, Length 667 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLD4-205ENST00000553861 NISCHQ9Y2I1 1504 aa54.49■■■■■ 6.31
PLD4-205ENST00000553861 CCDC180Q9P1Z9 1646 aa48.94■■■■■ 5.42
PLD4-205ENST00000553861 ABCC9O60706 1549 aa48.93■■■■■ 5.42
PLD4-205ENST00000553861 RB1CC1Q8TDY2 1594 aa46.59■■■■■ 5.05
PLD4-205ENST00000553861 NACADO15069 1562 aa46.27■■■■■ 5
PLD4-205ENST00000553861 DNAJC5BQ9UF47 199 aa45.94■■■■■ 4.94
PLD4-205ENST00000553861 DCAF8L2P0C7V8 631 aa45.91■■■■■ 4.94
PLD4-205ENST00000553861 MYO15BQ96JP2 1530 aa45.65■■■■■ 4.9
PLD4-205ENST00000553861 UNC13AQ9UPW8 1703 aa45.56■■■■■ 4.88
PLD4-205ENST00000553861 PABPN1Q86U42 306 aaKnown RBP eCLIP45.53■■■■■ 4.88
PLD4-205ENST00000553861 BICRAQ9NZM4 1560 aa45.25■■■■■ 4.83
PLD4-205ENST00000553861 ZCCHC6Q5VYS8 1495 aaKnown RBP45.17■■■■■ 4.82
PLD4-205ENST00000553861 DCAF1Q9Y4B6 1507 aa45.04■■■■■ 4.8
PLD4-205ENST00000553861 SHROOM4Q9ULL8 1493 aa44.66■■■■■ 4.74
PLD4-205ENST00000553861 SCRIBQ14160 1630 aa44.56■■■■■ 4.72
PLD4-205ENST00000553861 CC2D2AQ9P2K1 1620 aa44.23■■■■■ 4.67
PLD4-205ENST00000553861 EIF4G1Q04637 1599 aaKnown RBP44.14■■■■■ 4.66
PLD4-205ENST00000553861 CECR2Q9BXF3 1484 aa44.09■■■■■ 4.65
PLD4-205ENST00000553861 NCAPD3P42695 1498 aa42.71■■■■■ 4.43
PLD4-205ENST00000553861 ATAD2BQ9ULI0 1458 aa42.58■■■■■ 4.41
PLD4-205ENST00000553861 SMARCA4P51532 1647 aa42.53■■■■■ 4.4
PLD4-205ENST00000553861 SMARCA2P51531 1590 aa42.45■■■■■ 4.39
PLD4-205ENST00000553861 HMGXB3Q12766 1538 aa42.41■■■■■ 4.38
PLD4-205ENST00000553861 BAZ1AQ9NRL2 1556 aaPredicted RBP42.31■■■■■ 4.36
PLD4-205ENST00000553861 ERCC6Q03468 1493 aa42.24■■■■■ 4.35
PLD4-205ENST00000553861 CUX2O14529 1486 aa42.23■■■■■ 4.35
PLD4-205ENST00000553861 DNAJC5Q9H3Z4 198 aa42.21■■■■■ 4.35
PLD4-205ENST00000553861 BAZ1BQ9UIG0 1483 aaKnown RBP42.15■■■■■ 4.34
PLD4-205ENST00000553861 PEG3Q9GZU2 1588 aa42.14■■■■■ 4.34
PLD4-205ENST00000553861 NESP48681 1621 aa42.03■■■■■ 4.32
PLD4-205ENST00000553861 MROH2BQ7Z745 1585 aa41.98■■■■■ 4.31
PLD4-205ENST00000553861 LAMC3Q9Y6N6 1575 aa41.76■■■■■ 4.28
PLD4-205ENST00000553861 THOC2Q8NI27 1593 aaKnown RBP41.66■■■■■ 4.26
PLD4-205ENST00000553861 KIF21AQ7Z4S6 1674 aa41.51■■■■■ 4.24
PLD4-205ENST00000553861 PDS5BQ9NTI5 1447 aa41.5■■■■■ 4.23
PLD4-205ENST00000553861 WIZO95785 1651 aa41.48■■■■■ 4.23
PLD4-205ENST00000553861 CADPSQ9ULU8 1353 aa41.4■■■■■ 4.22
PLD4-205ENST00000553861 MRC2Q9UBG0 1479 aa41.15■■■■■ 4.18
PLD4-205ENST00000553861 RSF1Q96T23 1441 aaPredicted RBP41.1■■■■■ 4.17
PLD4-205ENST00000553861 WDR62O43379 1518 aa41.08■■■■■ 4.17
PLD4-205ENST00000553861 CEP164Q9UPV0 1460 aa40.98■■■■■ 4.15
PLD4-205ENST00000553861 TOP2AP11388 1531 aaKnown RBP40.97■■■■■ 4.15
PLD4-205ENST00000553861 CFTRP13569 1480 aa40.93■■■■■ 4.14
PLD4-205ENST00000553861 FANCD2Q9BXW9 1451 aa40.93■■■■■ 4.14
PLD4-205ENST00000553861 URB2Q14146 1524 aaKnown RBP40.61■■■■■ 4.09
PLD4-205ENST00000553861 PRDM2Q13029 1718 aa40.54■■■■■ 4.08
PLD4-205ENST00000553861 CCDC88BA6NC98 1476 aa40.49■■■■■ 4.07
PLD4-205ENST00000553861 TRIM41Q8WV44 630 aa40.3■■■■■ 4.04
PLD4-205ENST00000553861 OSCARQ8IYS5 282 aa40.23■■■■■ 4.03
PLD4-205ENST00000553861 IFT140Q96RY7 1462 aa40.17■■■■■ 4.02
PLD4-205ENST00000553861 TOPBP1Q92547 1522 aa40.16■■■■■ 4.02
PLD4-205ENST00000553861 ZNF608Q9ULD9 1512 aaPredicted RBP40.11■■■■■ 4.01
PLD4-205ENST00000553861 ABCC8Q09428 1581 aa40.06■■■■■ 4
PLD4-205ENST00000553861 DNMBPQ6XZF7 1577 aa40.01■■■■■ 4
PLD4-205ENST00000553861 EIF4G3O43432 1585 aaKnown RBP39.89■■■■□ 3.98
PLD4-205ENST00000553861 TARBP1Q13395 1621 aaKnown RBP39.82■■■■□ 3.96
PLD4-205ENST00000553861 RIMBP3CA6NJZ7 1639 aa39.76■■■■□ 3.96
PLD4-205ENST00000553861 RIMBP3BA6NNM3 1639 aa39.76■■■■□ 3.96
PLD4-205ENST00000553861 RIMBP3Q9UFD9 1639 aa39.76■■■■□ 3.96
PLD4-205ENST00000553861 POLA1P09884 1462 aaPredicted RBP39.75■■■■□ 3.95
PLD4-205ENST00000553861 AQRO60306 1485 aaKnown RBP eCLIP39.72■■■■□ 3.95
PLD4-205ENST00000553861 ARHGEF11O15085 1522 aa39.64■■■■□ 3.94
PLD4-205ENST00000553861 CHD1O14646 1710 aa39.6■■■■□ 3.93
PLD4-205ENST00000553861 RAD54L2Q9Y4B4 1467 aa39.59■■■■□ 3.93
PLD4-205ENST00000553861 SOGA1O94964 1423 aa39.54■■■■□ 3.92
PLD4-205ENST00000553861 FGD5Q6ZNL6 1462 aa39.49■■■■□ 3.91
PLD4-205ENST00000553861 TDRD9Q8NDG6 1382 aaKnown RBP39.46■■■■□ 3.91
PLD4-205ENST00000553861 CUX1P39880 1505 aa39.46■■■■□ 3.91
PLD4-205ENST00000553861 WDR97A6NE52 1622 aa39.43■■■■□ 3.9
PLD4-205ENST00000553861 FBLN2P98095 1184 aa39.42■■■■□ 3.9
PLD4-205ENST00000553861 SNAPC4Q5SXM2 1469 aa39.33■■■■□ 3.89
PLD4-205ENST00000553861 CYB5RLQ6IPT4 315 aa39.29■■■■□ 3.88
PLD4-205ENST00000553861 ARAP1Q96P48 1450 aa39.25■■■■□ 3.87
PLD4-205ENST00000553861 MAGI1Q96QZ7 1491 aaPredicted RBP39.24■■■■□ 3.87
PLD4-205ENST00000553861 GRIN2BQ13224 1484 aa39.22■■■■□ 3.87
PLD4-205ENST00000553861 SUPT5HO00267 1087 aaKnown RBP39.18■■■■□ 3.86
PLD4-205ENST00000553861 CLASP1Q7Z460 1538 aa39.17■■■■□ 3.86
PLD4-205ENST00000553861 CHMP7Q8WUX9 453 aaPredicted RBP39.14■■■■□ 3.86
PLD4-205ENST00000553861 SYNJ1O43426 1573 aa39.12■■■■□ 3.85
PLD4-205ENST00000553861 SYNJ2O15056 1496 aa39.1■■■■□ 3.85
PLD4-205ENST00000553861 PBRM1Q86U86 1689 aa39.08■■■■□ 3.85
PLD4-205ENST00000553861 GAPVD1Q14C86 1478 aa39.07■■■■□ 3.85
PLD4-205ENST00000553861 ABCA10Q8WWZ4 1543 aa39.05■■■■□ 3.84
PLD4-205ENST00000553861 ABCA5Q8WWZ7 1642 aa39.01■■■■□ 3.84
PLD4-205ENST00000553861 WRNQ14191 1432 aaPredicted RBP eCLIP38.86■■■■□ 3.81
PLD4-205ENST00000553861 TRHP20396 242 aaPredicted RBP38.85■■■■□ 3.81
PLD4-205ENST00000553861 BIVM-ERCC5R4GMW8 1640 aa38.82■■■■□ 3.81
PLD4-205ENST00000553861 TOP2BQ02880 1626 aa38.81■■■■□ 3.8
PLD4-205ENST00000553861 GRIN2AQ12879 1464 aa38.73■■■■□ 3.79
PLD4-205ENST00000553861 ADAMTS12P58397 1594 aa38.72■■■■□ 3.79
PLD4-205ENST00000553861 NUP160Q12769 1436 aa38.61■■■■□ 3.77
PLD4-205ENST00000553861 CEP170Q5SW79 1584 aa38.59■■■■□ 3.77
PLD4-205ENST00000553861 FHAD1B1AJZ9 1412 aa38.58■■■■□ 3.77
PLD4-205ENST00000553861 ERICH3Q5RHP9 1530 aa38.56■■■■□ 3.76
PLD4-205ENST00000553861 ERCC6L2Q5T890 1561 aa38.53■■■■□ 3.76
PLD4-205ENST00000553861 SHROOM2Q13796 1616 aa38.45■■■■□ 3.75
PLD4-205ENST00000553861 PRG4Q92954 1404 aaPredicted RBP38.21■■■■□ 3.71
PLD4-205ENST00000553861 JPH4Q96JJ6 628 aa38.17■■■■□ 3.7
PLD4-205ENST00000553861 RUSC2Q8N2Y8 1516 aa38.17■■■■□ 3.7
PLD4-205ENST00000553861 IGF1RP08069 1367 aa38.04■■■■□ 3.68
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms