RNA–Protein interactions for RNA: ENST00000518347.5

DENND3-207, Transcript of DENN domain containing 3, humanhuman

TSL 2 BASIC

Gene DENND3, Length 850 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DENND3-207ENST00000518347 NISCHQ9Y2I1 1504 aa53.11■■■■■ 6.09
DENND3-207ENST00000518347 ABCC9O60706 1549 aa48.65■■■■■ 5.38
DENND3-207ENST00000518347 CCDC180Q9P1Z9 1646 aa47.99■■■■■ 5.27
DENND3-207ENST00000518347 DNAJC5BQ9UF47 199 aa46.31■■■■■ 5
DENND3-207ENST00000518347 RB1CC1Q8TDY2 1594 aa45.95■■■■■ 4.95
DENND3-207ENST00000518347 NACADO15069 1562 aa45.45■■■■■ 4.87
DENND3-207ENST00000518347 PABPN1Q86U42 306 aaKnown RBP eCLIP45.13■■■■■ 4.82
DENND3-207ENST00000518347 UNC13AQ9UPW8 1703 aa45.12■■■■■ 4.81
DENND3-207ENST00000518347 DCAF8L2P0C7V8 631 aa44.93■■■■■ 4.78
DENND3-207ENST00000518347 BICRAQ9NZM4 1560 aa44.8■■■■■ 4.76
DENND3-207ENST00000518347 MYO15BQ96JP2 1530 aa44.6■■■■■ 4.73
DENND3-207ENST00000518347 CC2D2AQ9P2K1 1620 aa43.95■■■■■ 4.63
DENND3-207ENST00000518347 SHROOM4Q9ULL8 1493 aa43.93■■■■■ 4.62
DENND3-207ENST00000518347 ZCCHC6Q5VYS8 1495 aaKnown RBP43.9■■■■■ 4.62
DENND3-207ENST00000518347 CECR2Q9BXF3 1484 aa43.86■■■■■ 4.61
DENND3-207ENST00000518347 DCAF1Q9Y4B6 1507 aa43.8■■■■■ 4.6
DENND3-207ENST00000518347 SCRIBQ14160 1630 aa43.71■■■■■ 4.59
DENND3-207ENST00000518347 EIF4G1Q04637 1599 aaKnown RBP43.67■■■■■ 4.58
DENND3-207ENST00000518347 DNAJC5Q9H3Z4 198 aa42.89■■■■■ 4.46
DENND3-207ENST00000518347 CUX2O14529 1486 aa42.15■■■■■ 4.34
DENND3-207ENST00000518347 NCAPD3P42695 1498 aa41.98■■■■■ 4.31
DENND3-207ENST00000518347 ERCC6Q03468 1493 aa41.95■■■■■ 4.31
DENND3-207ENST00000518347 ATAD2BQ9ULI0 1458 aa41.79■■■■■ 4.28
DENND3-207ENST00000518347 NESP48681 1621 aa41.66■■■■■ 4.26
DENND3-207ENST00000518347 HMGXB3Q12766 1538 aa41.64■■■■■ 4.26
DENND3-207ENST00000518347 SMARCA4P51532 1647 aa41.62■■■■■ 4.25
DENND3-207ENST00000518347 SMARCA2P51531 1590 aa41.58■■■■■ 4.25
DENND3-207ENST00000518347 THOC2Q8NI27 1593 aaKnown RBP41.41■■■■■ 4.22
DENND3-207ENST00000518347 BAZ1BQ9UIG0 1483 aaKnown RBP41.3■■■■■ 4.2
DENND3-207ENST00000518347 BAZ1AQ9NRL2 1556 aaPredicted RBP41.23■■■■■ 4.19
DENND3-207ENST00000518347 PEG3Q9GZU2 1588 aa41.21■■■■■ 4.19
DENND3-207ENST00000518347 LAMC3Q9Y6N6 1575 aa41.16■■■■■ 4.18
DENND3-207ENST00000518347 KIF21AQ7Z4S6 1674 aa41.13■■■■■ 4.17
DENND3-207ENST00000518347 MROH2BQ7Z745 1585 aa40.97■■■■■ 4.15
DENND3-207ENST00000518347 PDS5BQ9NTI5 1447 aa40.84■■■■■ 4.13
DENND3-207ENST00000518347 TRIM41Q8WV44 630 aa40.7■■■■■ 4.11
DENND3-207ENST00000518347 CADPSQ9ULU8 1353 aa40.63■■■■■ 4.1
DENND3-207ENST00000518347 MRC2Q9UBG0 1479 aa40.63■■■■■ 4.09
DENND3-207ENST00000518347 WDR62O43379 1518 aa40.62■■■■■ 4.09
DENND3-207ENST00000518347 WIZO95785 1651 aa40.47■■■■■ 4.07
DENND3-207ENST00000518347 CEP164Q9UPV0 1460 aa40.31■■■■■ 4.04
DENND3-207ENST00000518347 FANCD2Q9BXW9 1451 aa40.23■■■■■ 4.03
DENND3-207ENST00000518347 CFTRP13569 1480 aa40.08■■■■■ 4.01
DENND3-207ENST00000518347 URB2Q14146 1524 aaKnown RBP40.01■■■■■ 4
DENND3-207ENST00000518347 OSCARQ8IYS5 282 aa39.99■■■■□ 3.99
DENND3-207ENST00000518347 TOP2AP11388 1531 aaKnown RBP39.84■■■■□ 3.97
DENND3-207ENST00000518347 RSF1Q96T23 1441 aaPredicted RBP39.81■■■■□ 3.96
DENND3-207ENST00000518347 RIMBP3CA6NJZ7 1639 aa39.77■■■■□ 3.96
DENND3-207ENST00000518347 RIMBP3BA6NNM3 1639 aa39.77■■■■□ 3.96
DENND3-207ENST00000518347 RIMBP3Q9UFD9 1639 aa39.77■■■■□ 3.96
DENND3-207ENST00000518347 PRDM2Q13029 1718 aa39.71■■■■□ 3.95
DENND3-207ENST00000518347 ZNF608Q9ULD9 1512 aaPredicted RBP39.64■■■■□ 3.94
DENND3-207ENST00000518347 ARHGEF11O15085 1522 aa39.54■■■■□ 3.92
DENND3-207ENST00000518347 IFT140Q96RY7 1462 aa39.51■■■■□ 3.92
DENND3-207ENST00000518347 TOPBP1Q92547 1522 aa39.42■■■■□ 3.9
DENND3-207ENST00000518347 EIF4G3O43432 1585 aaKnown RBP39.39■■■■□ 3.9
DENND3-207ENST00000518347 CCDC88BA6NC98 1476 aa39.38■■■■□ 3.9
DENND3-207ENST00000518347 CHD1O14646 1710 aa39.26■■■■□ 3.87
DENND3-207ENST00000518347 DNMBPQ6XZF7 1577 aa39.21■■■■□ 3.87
DENND3-207ENST00000518347 TARBP1Q13395 1621 aaKnown RBP39.19■■■■□ 3.86
DENND3-207ENST00000518347 CYB5RLQ6IPT4 315 aa39.16■■■■□ 3.86
DENND3-207ENST00000518347 ABCC8Q09428 1581 aa39.14■■■■□ 3.86
DENND3-207ENST00000518347 AQRO60306 1485 aaKnown RBP eCLIP39.13■■■■□ 3.85
DENND3-207ENST00000518347 ARAP1Q96P48 1450 aa39.13■■■■□ 3.85
DENND3-207ENST00000518347 POLA1P09884 1462 aaPredicted RBP38.98■■■■□ 3.83
DENND3-207ENST00000518347 TRHP20396 242 aaPredicted RBP38.89■■■■□ 3.82
DENND3-207ENST00000518347 FBLN2P98095 1184 aa38.86■■■■□ 3.81
DENND3-207ENST00000518347 RAD54L2Q9Y4B4 1467 aa38.86■■■■□ 3.81
DENND3-207ENST00000518347 CLASP1Q7Z460 1538 aa38.77■■■■□ 3.8
DENND3-207ENST00000518347 TDRD9Q8NDG6 1382 aaKnown RBP38.75■■■■□ 3.79
DENND3-207ENST00000518347 SNAPC4Q5SXM2 1469 aa38.73■■■■□ 3.79
DENND3-207ENST00000518347 SOGA1O94964 1423 aa38.69■■■■□ 3.78
DENND3-207ENST00000518347 FGD5Q6ZNL6 1462 aa38.63■■■■□ 3.77
DENND3-207ENST00000518347 WDR97A6NE52 1622 aa38.62■■■■□ 3.77
DENND3-207ENST00000518347 SYNJ1O43426 1573 aa38.57■■■■□ 3.76
DENND3-207ENST00000518347 MAGI1Q96QZ7 1491 aaPredicted RBP38.54■■■■□ 3.76
DENND3-207ENST00000518347 CUX1P39880 1505 aa38.53■■■■□ 3.76
DENND3-207ENST00000518347 GRIN2BQ13224 1484 aa38.46■■■■□ 3.75
DENND3-207ENST00000518347 CHMP7Q8WUX9 453 aaPredicted RBP38.45■■■■□ 3.75
DENND3-207ENST00000518347 SYNJ2O15056 1496 aa38.43■■■■□ 3.74
DENND3-207ENST00000518347 PBRM1Q86U86 1689 aa38.39■■■■□ 3.74
DENND3-207ENST00000518347 GAPVD1Q14C86 1478 aa38.31■■■■□ 3.72
DENND3-207ENST00000518347 ABCA5Q8WWZ7 1642 aa38.22■■■■□ 3.71
DENND3-207ENST00000518347 AEBP2Q6ZN18 517 aaPredicted RBP38.19■■■■□ 3.7
DENND3-207ENST00000518347 ERCC6L2Q5T890 1561 aa38.18■■■■□ 3.7
DENND3-207ENST00000518347 ABCA10Q8WWZ4 1543 aa38.12■■■■□ 3.69
DENND3-207ENST00000518347 GRIN2AQ12879 1464 aa38.02■■■■□ 3.68
DENND3-207ENST00000518347 CEP170Q5SW79 1584 aa37.99■■■■□ 3.67
DENND3-207ENST00000518347 ADAMTS12P58397 1594 aa37.97■■■■□ 3.67
DENND3-207ENST00000518347 NUP160Q12769 1436 aa37.92■■■■□ 3.66
DENND3-207ENST00000518347 SHROOM2Q13796 1616 aa37.9■■■■□ 3.66
DENND3-207ENST00000518347 KIF13AQ9H1H9 1805 aa37.82■■■■□ 3.64
DENND3-207ENST00000518347 WRNQ14191 1432 aaPredicted RBP eCLIP37.76■■■■□ 3.63
DENND3-207ENST00000518347 BIVM-ERCC5R4GMW8 1640 aa37.72■■■■□ 3.63
DENND3-207ENST00000518347 FHAD1B1AJZ9 1412 aa37.7■■■■□ 3.63
DENND3-207ENST00000518347 TOP2BQ02880 1626 aa37.69■■■■□ 3.62
DENND3-207ENST00000518347 ERICH3Q5RHP9 1530 aa37.61■■■■□ 3.61
DENND3-207ENST00000518347 PRG4Q92954 1404 aaPredicted RBP37.56■■■■□ 3.6
DENND3-207ENST00000518347 RUSC2Q8N2Y8 1516 aa37.46■■■■□ 3.59
DENND3-207ENST00000518347 ABCC10Q5T3U5 1492 aa37.4■■■■□ 3.58
Retrieved 100 of 20,778 RNA–protein pairs in 557.1 ms