RNA–Protein interactions for RNA: ENST00000312134.2

CST6-201, Transcript of cystatin E/M, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CST6, Length 759 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CST6-201ENST00000312134 NISCHQ9Y2I1 1504 aa57.59■■■■■ 6.81
CST6-201ENST00000312134 CCDC180Q9P1Z9 1646 aa51.27■■■■■ 5.8
CST6-201ENST00000312134 ABCC9O60706 1549 aa50.01■■■■■ 5.6
CST6-201ENST00000312134 RB1CC1Q8TDY2 1594 aa48.17■■■■■ 5.3
CST6-201ENST00000312134 NACADO15069 1562 aa48.13■■■■■ 5.3
CST6-201ENST00000312134 ZCCHC6Q5VYS8 1495 aaKnown RBP47.98■■■■■ 5.27
CST6-201ENST00000312134 DCAF8L2P0C7V8 631 aa47.93■■■■■ 5.26
CST6-201ENST00000312134 MYO15BQ96JP2 1530 aa47.87■■■■■ 5.25
CST6-201ENST00000312134 DCAF1Q9Y4B6 1507 aa47.69■■■■■ 5.22
CST6-201ENST00000312134 UNC13AQ9UPW8 1703 aa47.22■■■■■ 5.15
CST6-201ENST00000312134 BICRAQ9NZM4 1560 aa46.77■■■■■ 5.08
CST6-201ENST00000312134 SCRIBQ14160 1630 aa46.69■■■■■ 5.07
CST6-201ENST00000312134 PABPN1Q86U42 306 aaKnown RBP eCLIP46.69■■■■■ 5.06
CST6-201ENST00000312134 SHROOM4Q9ULL8 1493 aa46.24■■■■■ 4.99
CST6-201ENST00000312134 DNAJC5BQ9UF47 199 aa45.89■■■■■ 4.94
CST6-201ENST00000312134 EIF4G1Q04637 1599 aaKnown RBP45.49■■■■■ 4.87
CST6-201ENST00000312134 CC2D2AQ9P2K1 1620 aa45.3■■■■■ 4.84
CST6-201ENST00000312134 CECR2Q9BXF3 1484 aa44.93■■■■■ 4.78
CST6-201ENST00000312134 SMARCA4P51532 1647 aa44.71■■■■■ 4.75
CST6-201ENST00000312134 BAZ1AQ9NRL2 1556 aaPredicted RBP44.63■■■■■ 4.73
CST6-201ENST00000312134 ATAD2BQ9ULI0 1458 aa44.41■■■■■ 4.7
CST6-201ENST00000312134 NCAPD3P42695 1498 aa44.4■■■■■ 4.7
CST6-201ENST00000312134 MROH2BQ7Z745 1585 aa44.39■■■■■ 4.7
CST6-201ENST00000312134 SMARCA2P51531 1590 aa44.37■■■■■ 4.69
CST6-201ENST00000312134 PEG3Q9GZU2 1588 aa44.3■■■■■ 4.68
CST6-201ENST00000312134 HMGXB3Q12766 1538 aa44.21■■■■■ 4.67
CST6-201ENST00000312134 BAZ1BQ9UIG0 1483 aaKnown RBP44.02■■■■■ 4.64
CST6-201ENST00000312134 WIZO95785 1651 aa43.94■■■■■ 4.62
CST6-201ENST00000312134 RSF1Q96T23 1441 aaPredicted RBP43.86■■■■■ 4.61
CST6-201ENST00000312134 TOP2AP11388 1531 aaKnown RBP43.44■■■■■ 4.54
CST6-201ENST00000312134 NESP48681 1621 aa43.31■■■■■ 4.52
CST6-201ENST00000312134 LAMC3Q9Y6N6 1575 aa43.24■■■■■ 4.51
CST6-201ENST00000312134 ERCC6Q03468 1493 aa43.06■■■■■ 4.48
CST6-201ENST00000312134 CADPSQ9ULU8 1353 aa43.06■■■■■ 4.48
CST6-201ENST00000312134 CCDC88BA6NC98 1476 aa42.91■■■■■ 4.46
CST6-201ENST00000312134 KIF21AQ7Z4S6 1674 aa42.89■■■■■ 4.46
CST6-201ENST00000312134 PDS5BQ9NTI5 1447 aa42.88■■■■■ 4.45
CST6-201ENST00000312134 CFTRP13569 1480 aa42.85■■■■■ 4.45
CST6-201ENST00000312134 THOC2Q8NI27 1593 aaKnown RBP42.71■■■■■ 4.43
CST6-201ENST00000312134 CUX2O14529 1486 aa42.67■■■■■ 4.42
CST6-201ENST00000312134 PRDM2Q13029 1718 aa42.66■■■■■ 4.42
CST6-201ENST00000312134 SUPT5HO00267 1087 aaKnown RBP42.65■■■■■ 4.42
CST6-201ENST00000312134 FANCD2Q9BXW9 1451 aa42.58■■■■■ 4.41
CST6-201ENST00000312134 CEP164Q9UPV0 1460 aa42.53■■■■■ 4.4
CST6-201ENST00000312134 MRC2Q9UBG0 1479 aa42.47■■■■■ 4.39
CST6-201ENST00000312134 WDR62O43379 1518 aa42.37■■■■■ 4.37
CST6-201ENST00000312134 URB2Q14146 1524 aaKnown RBP42.19■■■■■ 4.34
CST6-201ENST00000312134 TOPBP1Q92547 1522 aa41.93■■■■■ 4.3
CST6-201ENST00000312134 ABCC8Q09428 1581 aa41.92■■■■■ 4.3
CST6-201ENST00000312134 DNMBPQ6XZF7 1577 aa41.9■■■■■ 4.3
CST6-201ENST00000312134 CUX1P39880 1505 aa41.64■■■■■ 4.26
CST6-201ENST00000312134 IFT140Q96RY7 1462 aa41.63■■■■■ 4.25
CST6-201ENST00000312134 POLA1P09884 1462 aaPredicted RBP41.57■■■■■ 4.25
CST6-201ENST00000312134 TARBP1Q13395 1621 aaKnown RBP41.53■■■■■ 4.24
CST6-201ENST00000312134 FGD5Q6ZNL6 1462 aa41.47■■■■■ 4.23
CST6-201ENST00000312134 ZNF608Q9ULD9 1512 aaPredicted RBP41.45■■■■■ 4.23
CST6-201ENST00000312134 RAD54L2Q9Y4B4 1467 aa41.37■■■■■ 4.21
CST6-201ENST00000312134 SOGA1O94964 1423 aa41.36■■■■■ 4.21
CST6-201ENST00000312134 EIF4G3O43432 1585 aaKnown RBP41.33■■■■■ 4.21
CST6-201ENST00000312134 BIVM-ERCC5R4GMW8 1640 aa41.33■■■■■ 4.21
CST6-201ENST00000312134 WRNQ14191 1432 aaPredicted RBP eCLIP41.33■■■■■ 4.21
CST6-201ENST00000312134 TOP2BQ02880 1626 aa41.3■■■■■ 4.2
CST6-201ENST00000312134 DNAJC5Q9H3Z4 198 aa41.29■■■■■ 4.2
CST6-201ENST00000312134 SYNJ1O43426 1573 aa41.29■■■■■ 4.2
CST6-201ENST00000312134 WDR97A6NE52 1622 aa41.23■■■■■ 4.19
CST6-201ENST00000312134 AQRO60306 1485 aaKnown RBP eCLIP41.21■■■■■ 4.19
CST6-201ENST00000312134 TDRD9Q8NDG6 1382 aaKnown RBP41.11■■■■■ 4.17
CST6-201ENST00000312134 ABCA10Q8WWZ4 1543 aa41.08■■■■■ 4.17
CST6-201ENST00000312134 ABCA5Q8WWZ7 1642 aa40.96■■■■■ 4.15
CST6-201ENST00000312134 PBRM1Q86U86 1689 aa40.91■■■■■ 4.14
CST6-201ENST00000312134 GAPVD1Q14C86 1478 aa40.9■■■■■ 4.14
CST6-201ENST00000312134 GRIN2BQ13224 1484 aa40.9■■■■■ 4.14
CST6-201ENST00000312134 CHD1O14646 1710 aa40.86■■■■■ 4.13
CST6-201ENST00000312134 OSCARQ8IYS5 282 aa40.84■■■■■ 4.13
CST6-201ENST00000312134 SNAPC4Q5SXM2 1469 aa40.83■■■■■ 4.13
CST6-201ENST00000312134 MAGI1Q96QZ7 1491 aaPredicted RBP40.8■■■■■ 4.12
CST6-201ENST00000312134 SYNJ2O15056 1496 aa40.64■■■■■ 4.1
CST6-201ENST00000312134 FBLN2P98095 1184 aa40.61■■■■■ 4.09
CST6-201ENST00000312134 ERICH3Q5RHP9 1530 aa40.6■■■■■ 4.09
CST6-201ENST00000312134 ADAMTS12P58397 1594 aa40.54■■■■■ 4.08
CST6-201ENST00000312134 CHMP7Q8WUX9 453 aaPredicted RBP40.54■■■■■ 4.08
CST6-201ENST00000312134 KIF27Q86VH2 1401 aa40.45■■■■■ 4.07
CST6-201ENST00000312134 FHAD1B1AJZ9 1412 aa40.42■■■■■ 4.06
CST6-201ENST00000312134 GRIN2AQ12879 1464 aa40.39■■■■■ 4.06
CST6-201ENST00000312134 CLASP1Q7Z460 1538 aa40.38■■■■■ 4.06
CST6-201ENST00000312134 IGF1RP08069 1367 aa40.3■■■■■ 4.04
CST6-201ENST00000312134 TRIM41Q8WV44 630 aa40.29■■■■■ 4.04
CST6-201ENST00000312134 RIMBP3CA6NJZ7 1639 aa40.28■■■■■ 4.04
CST6-201ENST00000312134 RIMBP3BA6NNM3 1639 aa40.28■■■■■ 4.04
CST6-201ENST00000312134 RIMBP3Q9UFD9 1639 aa40.28■■■■■ 4.04
CST6-201ENST00000312134 CUL7Q14999 1698 aa40.26■■■■■ 4.04
CST6-201ENST00000312134 ARHGEF11O15085 1522 aa40.25■■■■■ 4.03
CST6-201ENST00000312134 NUP160Q12769 1436 aa40.22■■■■■ 4.03
CST6-201ENST00000312134 CEP170Q5SW79 1584 aa40.22■■■■■ 4.03
CST6-201ENST00000312134 RUSC2Q8N2Y8 1516 aa40.14■■■■■ 4.02
CST6-201ENST00000312134 CARMIL1Q5VZK9 1371 aa40.04■■■■■ 4
CST6-201ENST00000312134 SHROOM2Q13796 1616 aa39.98■■■■□ 3.99
CST6-201ENST00000312134 ARAP1Q96P48 1450 aa39.93■■■■□ 3.98
CST6-201ENST00000312134 CHIC1Q5VXU3 224 aa39.88■■■■□ 3.97
CST6-201ENST00000312134 RAPGEF2Q9Y4G8 1499 aa39.83■■■■□ 3.97
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms