Protein–RNA interactions for Protein: Q53R12

TM4SF20, Transmembrane 4 L6 family member 20, humanhuman

Predictions only

Length 229 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF20Q53R12 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
TM4SF20Q53R12 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC18.8■□□□□ 0.6
TM4SF20Q53R12 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC18.8■□□□□ 0.6
TM4SF20Q53R12 MRAP2-201ENST00000257776 2153 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
TM4SF20Q53R12 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
TM4SF20Q53R12 TLE6-201ENST00000246112 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
TM4SF20Q53R12 SNTB1-202ENST00000517992 2273 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
TM4SF20Q53R12 PHF23-205ENST00000571362 1768 ntTSL 2 BASIC18.79■□□□□ 0.6
TM4SF20Q53R12 GPX1-201ENST00000419349 1106 ntBASIC18.79■□□□□ 0.6
TM4SF20Q53R12 ABHD17AP3-201ENST00000503096 1137 ntBASIC18.79■□□□□ 0.6
TM4SF20Q53R12 TMEM114-202ENST00000568335 899 ntTSL 3 BASIC18.79■□□□□ 0.6
TM4SF20Q53R12 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
TM4SF20Q53R12 AC142472.1-201ENST00000612013 1741 ntBASIC18.79■□□□□ 0.6
TM4SF20Q53R12 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
TM4SF20Q53R12 KCNJ4-201ENST00000303592 2065 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
TM4SF20Q53R12 SHF-207ENST00000560540 2062 ntTSL 5 BASIC18.78■□□□□ 0.6
TM4SF20Q53R12 C1orf122-201ENST00000373042 973 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
TM4SF20Q53R12 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
TM4SF20Q53R12 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
TM4SF20Q53R12 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
TM4SF20Q53R12 AL359504.2-201ENST00000605506 1601 ntBASIC18.78■□□□□ 0.6
TM4SF20Q53R12 FAM78B-201ENST00000338353 1597 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
TM4SF20Q53R12 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
TM4SF20Q53R12 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
TM4SF20Q53R12 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
TM4SF20Q53R12 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC18.77■□□□□ 0.6
TM4SF20Q53R12 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
TM4SF20Q53R12 FAM107B-205ENST00000378467 2374 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
TM4SF20Q53R12 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
TM4SF20Q53R12 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
TM4SF20Q53R12 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
TM4SF20Q53R12 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC18.76■□□□□ 0.59
TM4SF20Q53R12 PIGX-201ENST00000296333 953 ntAPPRIS ALT2 TSL 2 BASIC18.76■□□□□ 0.59
TM4SF20Q53R12 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
TM4SF20Q53R12 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC18.76■□□□□ 0.59
TM4SF20Q53R12 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
TM4SF20Q53R12 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
TM4SF20Q53R12 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
TM4SF20Q53R12 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC18.75■□□□□ 0.59
TM4SF20Q53R12 MCCD1-201ENST00000376191 955 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
TM4SF20Q53R12 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC18.75■□□□□ 0.59
TM4SF20Q53R12 MOB2-207ENST00000614710 705 ntTSL 5 BASIC18.75■□□□□ 0.59
TM4SF20Q53R12 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
TM4SF20Q53R12 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
TM4SF20Q53R12 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC18.75■□□□□ 0.59
TM4SF20Q53R12 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC18.75■□□□□ 0.59
TM4SF20Q53R12 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
TM4SF20Q53R12 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
TM4SF20Q53R12 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC18.74■□□□□ 0.59
TM4SF20Q53R12 AL157400.5-201ENST00000507624 621 ntBASIC18.74■□□□□ 0.59
TM4SF20Q53R12 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC18.74■□□□□ 0.59
TM4SF20Q53R12 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
TM4SF20Q53R12 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
TM4SF20Q53R12 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
TM4SF20Q53R12 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC18.73■□□□□ 0.59
TM4SF20Q53R12 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
TM4SF20Q53R12 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
TM4SF20Q53R12 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC18.73■□□□□ 0.59
TM4SF20Q53R12 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC18.72■□□□□ 0.59
TM4SF20Q53R12 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
TM4SF20Q53R12 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC18.72■□□□□ 0.59
TM4SF20Q53R12 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
TM4SF20Q53R12 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
TM4SF20Q53R12 SP8-202ENST00000418710 1618 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
TM4SF20Q53R12 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
TM4SF20Q53R12 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
TM4SF20Q53R12 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC18.72■□□□□ 0.59
TM4SF20Q53R12 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC18.72■□□□□ 0.59
TM4SF20Q53R12 AC092296.2-201ENST00000589470 999 ntBASIC18.72■□□□□ 0.59
TM4SF20Q53R12 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC18.72■□□□□ 0.59
TM4SF20Q53R12 CREM-210ENST00000374721 2020 ntTSL 5 BASIC18.71■□□□□ 0.59
TM4SF20Q53R12 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
TM4SF20Q53R12 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC18.71■□□□□ 0.59
TM4SF20Q53R12 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
TM4SF20Q53R12 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
TM4SF20Q53R12 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC18.71■□□□□ 0.59
TM4SF20Q53R12 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC18.71■□□□□ 0.59
TM4SF20Q53R12 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
TM4SF20Q53R12 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
TM4SF20Q53R12 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
TM4SF20Q53R12 DHRS13-201ENST00000378895 1921 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
TM4SF20Q53R12 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC18.7■□□□□ 0.58
TM4SF20Q53R12 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
TM4SF20Q53R12 HES4-202ENST00000428771 1040 ntTSL 2 BASIC18.69■□□□□ 0.58
TM4SF20Q53R12 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC18.69■□□□□ 0.58
TM4SF20Q53R12 HSD17B1P1-201ENST00000590052 955 ntBASIC18.69■□□□□ 0.58
TM4SF20Q53R12 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC18.69■□□□□ 0.58
TM4SF20Q53R12 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
TM4SF20Q53R12 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC18.69■□□□□ 0.58
TM4SF20Q53R12 PKM-204ENST00000449901 2526 ntTSL 2 BASIC18.69■□□□□ 0.58
TM4SF20Q53R12 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC18.69■□□□□ 0.58
TM4SF20Q53R12 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
TM4SF20Q53R12 C1QTNF5-202ENST00000528368 1356 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
TM4SF20Q53R12 RSPH1-201ENST00000291536 1430 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
TM4SF20Q53R12 AJAP1-201ENST00000378190 2383 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
TM4SF20Q53R12 RUNDC3A-201ENST00000225441 1821 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
TM4SF20Q53R12 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
TM4SF20Q53R12 ECEL1P2-201ENST00000461596 1295 ntBASIC18.68■□□□□ 0.58
TM4SF20Q53R12 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
TM4SF20Q53R12 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC18.68■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 63 ms