RNA–Protein interactions for RNA: ENST00000338353.3

FAM78B-201, Transcript of family with sequence similarity 78 member B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FAM78B, Length 1,597 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM78B-201ENST00000338353 NISCHQ9Y2I1 1504 aa59.8■■■■■ 7.16
FAM78B-201ENST00000338353 CCDC180Q9P1Z9 1646 aa53.08■■■■■ 6.09
FAM78B-201ENST00000338353 ABCC9O60706 1549 aa51.92■■■■■ 5.9
FAM78B-201ENST00000338353 DCAF8L2P0C7V8 631 aa50.04■■■■■ 5.6
FAM78B-201ENST00000338353 RB1CC1Q8TDY2 1594 aa49.92■■■■■ 5.58
FAM78B-201ENST00000338353 NACADO15069 1562 aa49.88■■■■■ 5.58
FAM78B-201ENST00000338353 ZCCHC6Q5VYS8 1495 aaKnown RBP49.83■■■■■ 5.57
FAM78B-201ENST00000338353 MYO15BQ96JP2 1530 aa49.57■■■■■ 5.53
FAM78B-201ENST00000338353 DCAF1Q9Y4B6 1507 aa49.42■■■■■ 5.5
FAM78B-201ENST00000338353 UNC13AQ9UPW8 1703 aa48.85■■■■■ 5.41
FAM78B-201ENST00000338353 PABPN1Q86U42 306 aaKnown RBP eCLIP48.56■■■■■ 5.36
FAM78B-201ENST00000338353 SCRIBQ14160 1630 aa48.53■■■■■ 5.36
FAM78B-201ENST00000338353 BICRAQ9NZM4 1560 aa48.43■■■■■ 5.34
FAM78B-201ENST00000338353 SHROOM4Q9ULL8 1493 aa47.84■■■■■ 5.25
FAM78B-201ENST00000338353 DNAJC5BQ9UF47 199 aa47.54■■■■■ 5.2
FAM78B-201ENST00000338353 EIF4G1Q04637 1599 aaKnown RBP47.14■■■■■ 5.14
FAM78B-201ENST00000338353 CC2D2AQ9P2K1 1620 aa46.94■■■■■ 5.1
FAM78B-201ENST00000338353 CECR2Q9BXF3 1484 aa46.62■■■■■ 5.05
FAM78B-201ENST00000338353 SMARCA4P51532 1647 aa46.39■■■■■ 5.02
FAM78B-201ENST00000338353 BAZ1AQ9NRL2 1556 aaPredicted RBP46.34■■■■■ 5.01
FAM78B-201ENST00000338353 MROH2BQ7Z745 1585 aa46.12■■■■■ 4.97
FAM78B-201ENST00000338353 ATAD2BQ9ULI0 1458 aa46.1■■■■■ 4.97
FAM78B-201ENST00000338353 SMARCA2P51531 1590 aa46.04■■■■■ 4.96
FAM78B-201ENST00000338353 NCAPD3P42695 1498 aa46.02■■■■■ 4.96
FAM78B-201ENST00000338353 PEG3Q9GZU2 1588 aa45.88■■■■■ 4.94
FAM78B-201ENST00000338353 HMGXB3Q12766 1538 aa45.81■■■■■ 4.92
FAM78B-201ENST00000338353 BAZ1BQ9UIG0 1483 aaKnown RBP45.74■■■■■ 4.91
FAM78B-201ENST00000338353 WIZO95785 1651 aa45.65■■■■■ 4.9
FAM78B-201ENST00000338353 RSF1Q96T23 1441 aaPredicted RBP45.62■■■■■ 4.89
FAM78B-201ENST00000338353 TOP2AP11388 1531 aaKnown RBP45.13■■■■■ 4.82
FAM78B-201ENST00000338353 NESP48681 1621 aa44.96■■■■■ 4.79
FAM78B-201ENST00000338353 LAMC3Q9Y6N6 1575 aa44.8■■■■■ 4.76
FAM78B-201ENST00000338353 ERCC6Q03468 1493 aa44.73■■■■■ 4.75
FAM78B-201ENST00000338353 CADPSQ9ULU8 1353 aa44.72■■■■■ 4.75
FAM78B-201ENST00000338353 SUPT5HO00267 1087 aaKnown RBP44.66■■■■■ 4.74
FAM78B-201ENST00000338353 CCDC88BA6NC98 1476 aa44.62■■■■■ 4.73
FAM78B-201ENST00000338353 PDS5BQ9NTI5 1447 aa44.51■■■■■ 4.72
FAM78B-201ENST00000338353 CFTRP13569 1480 aa44.46■■■■■ 4.71
FAM78B-201ENST00000338353 KIF21AQ7Z4S6 1674 aa44.43■■■■■ 4.7
FAM78B-201ENST00000338353 FANCD2Q9BXW9 1451 aa44.22■■■■■ 4.67
FAM78B-201ENST00000338353 THOC2Q8NI27 1593 aaKnown RBP44.21■■■■■ 4.67
FAM78B-201ENST00000338353 PRDM2Q13029 1718 aa44.16■■■■■ 4.66
FAM78B-201ENST00000338353 CEP164Q9UPV0 1460 aa44.15■■■■■ 4.66
FAM78B-201ENST00000338353 CUX2O14529 1486 aa44.14■■■■■ 4.66
FAM78B-201ENST00000338353 MRC2Q9UBG0 1479 aa44.06■■■■■ 4.64
FAM78B-201ENST00000338353 WDR62O43379 1518 aa43.89■■■■■ 4.62
FAM78B-201ENST00000338353 URB2Q14146 1524 aaKnown RBP43.78■■■■■ 4.6
FAM78B-201ENST00000338353 TOPBP1Q92547 1522 aa43.53■■■■■ 4.56
FAM78B-201ENST00000338353 ABCC8Q09428 1581 aa43.48■■■■■ 4.55
FAM78B-201ENST00000338353 DNMBPQ6XZF7 1577 aa43.47■■■■■ 4.55
FAM78B-201ENST00000338353 CUX1P39880 1505 aa43.26■■■■■ 4.52
FAM78B-201ENST00000338353 IFT140Q96RY7 1462 aa43.2■■■■■ 4.51
FAM78B-201ENST00000338353 POLA1P09884 1462 aaPredicted RBP43.17■■■■■ 4.5
FAM78B-201ENST00000338353 FGD5Q6ZNL6 1462 aa43.1■■■■■ 4.49
FAM78B-201ENST00000338353 ZNF608Q9ULD9 1512 aaPredicted RBP43.05■■■■■ 4.48
FAM78B-201ENST00000338353 TARBP1Q13395 1621 aaKnown RBP43.03■■■■■ 4.48
FAM78B-201ENST00000338353 WRNQ14191 1432 aaPredicted RBP eCLIP43.02■■■■■ 4.48
FAM78B-201ENST00000338353 RAD54L2Q9Y4B4 1467 aa43.01■■■■■ 4.48
FAM78B-201ENST00000338353 SOGA1O94964 1423 aa43■■■■■ 4.47
FAM78B-201ENST00000338353 SYNJ1O43426 1573 aa42.92■■■■■ 4.46
FAM78B-201ENST00000338353 TOP2BQ02880 1626 aa42.9■■■■■ 4.46
FAM78B-201ENST00000338353 BIVM-ERCC5R4GMW8 1640 aa42.89■■■■■ 4.46
FAM78B-201ENST00000338353 EIF4G3O43432 1585 aaKnown RBP42.87■■■■■ 4.45
FAM78B-201ENST00000338353 AQRO60306 1485 aaKnown RBP eCLIP42.83■■■■■ 4.45
FAM78B-201ENST00000338353 TDRD9Q8NDG6 1382 aaKnown RBP42.77■■■■■ 4.44
FAM78B-201ENST00000338353 WDR97A6NE52 1622 aa42.71■■■■■ 4.43
FAM78B-201ENST00000338353 DNAJC5Q9H3Z4 198 aa42.68■■■■■ 4.42
FAM78B-201ENST00000338353 ABCA10Q8WWZ4 1543 aa42.65■■■■■ 4.42
FAM78B-201ENST00000338353 GAPVD1Q14C86 1478 aa42.5■■■■■ 4.39
FAM78B-201ENST00000338353 ABCA5Q8WWZ7 1642 aa42.48■■■■■ 4.39
FAM78B-201ENST00000338353 GRIN2BQ13224 1484 aa42.47■■■■■ 4.39
FAM78B-201ENST00000338353 PBRM1Q86U86 1689 aa42.42■■■■■ 4.38
FAM78B-201ENST00000338353 SNAPC4Q5SXM2 1469 aa42.42■■■■■ 4.38
FAM78B-201ENST00000338353 OSCARQ8IYS5 282 aa42.39■■■■■ 4.38
FAM78B-201ENST00000338353 FBLN2P98095 1184 aa42.33■■■■■ 4.37
FAM78B-201ENST00000338353 MAGI1Q96QZ7 1491 aaPredicted RBP42.33■■■■■ 4.37
FAM78B-201ENST00000338353 CHD1O14646 1710 aa42.33■■■■■ 4.37
FAM78B-201ENST00000338353 CHMP7Q8WUX9 453 aaPredicted RBP42.19■■■■■ 4.34
FAM78B-201ENST00000338353 SYNJ2O15056 1496 aa42.17■■■■■ 4.34
FAM78B-201ENST00000338353 ERICH3Q5RHP9 1530 aa42.13■■■■■ 4.34
FAM78B-201ENST00000338353 TRIM41Q8WV44 630 aa42.13■■■■■ 4.33
FAM78B-201ENST00000338353 KIF27Q86VH2 1401 aa42.1■■■■■ 4.33
FAM78B-201ENST00000338353 ADAMTS12P58397 1594 aa42.07■■■■■ 4.33
FAM78B-201ENST00000338353 FHAD1B1AJZ9 1412 aa42■■■■■ 4.31
FAM78B-201ENST00000338353 GRIN2AQ12879 1464 aa41.93■■■■■ 4.3
FAM78B-201ENST00000338353 IGF1RP08069 1367 aa41.92■■■■■ 4.3
FAM78B-201ENST00000338353 CLASP1Q7Z460 1538 aa41.82■■■■■ 4.29
FAM78B-201ENST00000338353 RUSC2Q8N2Y8 1516 aa41.81■■■■■ 4.28
FAM78B-201ENST00000338353 CUL7Q14999 1698 aa41.79■■■■■ 4.28
FAM78B-201ENST00000338353 CEP170Q5SW79 1584 aa41.73■■■■■ 4.27
FAM78B-201ENST00000338353 NUP160Q12769 1436 aa41.72■■■■■ 4.27
FAM78B-201ENST00000338353 RIMBP3CA6NJZ7 1639 aa41.7■■■■■ 4.27
FAM78B-201ENST00000338353 RIMBP3BA6NNM3 1639 aa41.7■■■■■ 4.27
FAM78B-201ENST00000338353 ARHGEF11O15085 1522 aa41.7■■■■■ 4.27
FAM78B-201ENST00000338353 CHIC1Q5VXU3 224 aa41.7■■■■■ 4.27
FAM78B-201ENST00000338353 RIMBP3Q9UFD9 1639 aa41.7■■■■■ 4.27
FAM78B-201ENST00000338353 CARMIL1Q5VZK9 1371 aa41.69■■■■■ 4.26
FAM78B-201ENST00000338353 RAPGEF2Q9Y4G8 1499 aa41.45■■■■■ 4.23
FAM78B-201ENST00000338353 SHROOM2Q13796 1616 aa41.39■■■■■ 4.22
FAM78B-201ENST00000338353 ARAP1Q96P48 1450 aa41.38■■■■■ 4.21
Retrieved 100 of 20,778 RNA–protein pairs in 6.8 ms