RNA–Protein interactions for RNA: ENST00000367897.5

PBX1-202, Transcript of PBX homeobox 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PBX1, Length 1,459 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX1-202ENST00000367897 NISCHQ9Y2I1 1504 aa58.71■■■■■ 6.99
PBX1-202ENST00000367897 CCDC180Q9P1Z9 1646 aa51.97■■■■■ 5.91
PBX1-202ENST00000367897 ABCC9O60706 1549 aa50.16■■■■■ 5.62
PBX1-202ENST00000367897 ZCCHC6Q5VYS8 1495 aaKnown RBP49.05■■■■■ 5.44
PBX1-202ENST00000367897 DCAF8L2P0C7V8 631 aa48.72■■■■■ 5.39
PBX1-202ENST00000367897 NACADO15069 1562 aa48.65■■■■■ 5.38
PBX1-202ENST00000367897 DCAF1Q9Y4B6 1507 aa48.61■■■■■ 5.37
PBX1-202ENST00000367897 MYO15BQ96JP2 1530 aa48.57■■■■■ 5.37
PBX1-202ENST00000367897 RB1CC1Q8TDY2 1594 aa48.56■■■■■ 5.36
PBX1-202ENST00000367897 UNC13AQ9UPW8 1703 aa47.57■■■■■ 5.21
PBX1-202ENST00000367897 SCRIBQ14160 1630 aa47.44■■■■■ 5.18
PBX1-202ENST00000367897 BICRAQ9NZM4 1560 aa47.09■■■■■ 5.13
PBX1-202ENST00000367897 PABPN1Q86U42 306 aaKnown RBP eCLIP46.95■■■■■ 5.11
PBX1-202ENST00000367897 SHROOM4Q9ULL8 1493 aa46.71■■■■■ 5.07
PBX1-202ENST00000367897 EIF4G1Q04637 1599 aaKnown RBP45.78■■■■■ 4.92
PBX1-202ENST00000367897 CECR2Q9BXF3 1484 aa45.65■■■■■ 4.9
PBX1-202ENST00000367897 BAZ1AQ9NRL2 1556 aaPredicted RBP45.46■■■■■ 4.87
PBX1-202ENST00000367897 SMARCA4P51532 1647 aa45.44■■■■■ 4.86
PBX1-202ENST00000367897 CC2D2AQ9P2K1 1620 aa45.44■■■■■ 4.86
PBX1-202ENST00000367897 DNAJC5BQ9UF47 199 aa45.42■■■■■ 4.86
PBX1-202ENST00000367897 MROH2BQ7Z745 1585 aa45.25■■■■■ 4.83
PBX1-202ENST00000367897 ATAD2BQ9ULI0 1458 aa44.99■■■■■ 4.79
PBX1-202ENST00000367897 SMARCA2P51531 1590 aa44.99■■■■■ 4.79
PBX1-202ENST00000367897 PEG3Q9GZU2 1588 aa44.99■■■■■ 4.79
PBX1-202ENST00000367897 RSF1Q96T23 1441 aaPredicted RBP44.95■■■■■ 4.79
PBX1-202ENST00000367897 NCAPD3P42695 1498 aa44.86■■■■■ 4.77
PBX1-202ENST00000367897 WIZO95785 1651 aa44.84■■■■■ 4.77
PBX1-202ENST00000367897 HMGXB3Q12766 1538 aa44.74■■■■■ 4.75
PBX1-202ENST00000367897 BAZ1BQ9UIG0 1483 aaKnown RBP44.66■■■■■ 4.74
PBX1-202ENST00000367897 TOP2AP11388 1531 aaKnown RBP44.37■■■■■ 4.69
PBX1-202ENST00000367897 SUPT5HO00267 1087 aaKnown RBP44.26■■■■■ 4.68
PBX1-202ENST00000367897 CCDC88BA6NC98 1476 aa43.83■■■■■ 4.61
PBX1-202ENST00000367897 LAMC3Q9Y6N6 1575 aa43.62■■■■■ 4.57
PBX1-202ENST00000367897 NESP48681 1621 aa43.6■■■■■ 4.57
PBX1-202ENST00000367897 CADPSQ9ULU8 1353 aa43.58■■■■■ 4.57
PBX1-202ENST00000367897 CFTRP13569 1480 aa43.47■■■■■ 4.55
PBX1-202ENST00000367897 PRDM2Q13029 1718 aa43.32■■■■■ 4.53
PBX1-202ENST00000367897 PDS5BQ9NTI5 1447 aa43.25■■■■■ 4.51
PBX1-202ENST00000367897 KIF21AQ7Z4S6 1674 aa43.18■■■■■ 4.5
PBX1-202ENST00000367897 ERCC6Q03468 1493 aa43.17■■■■■ 4.5
PBX1-202ENST00000367897 FANCD2Q9BXW9 1451 aa43.09■■■■■ 4.49
PBX1-202ENST00000367897 CEP164Q9UPV0 1460 aa42.99■■■■■ 4.47
PBX1-202ENST00000367897 THOC2Q8NI27 1593 aaKnown RBP42.85■■■■■ 4.45
PBX1-202ENST00000367897 MRC2Q9UBG0 1479 aa42.79■■■■■ 4.44
PBX1-202ENST00000367897 WDR62O43379 1518 aa42.65■■■■■ 4.42
PBX1-202ENST00000367897 URB2Q14146 1524 aaKnown RBP42.64■■■■■ 4.42
PBX1-202ENST00000367897 ABCC8Q09428 1581 aa42.52■■■■■ 4.4
PBX1-202ENST00000367897 DNMBPQ6XZF7 1577 aa42.52■■■■■ 4.4
PBX1-202ENST00000367897 TOPBP1Q92547 1522 aa42.49■■■■■ 4.39
PBX1-202ENST00000367897 CUX2O14529 1486 aa42.49■■■■■ 4.39
PBX1-202ENST00000367897 CUX1P39880 1505 aa42.42■■■■■ 4.38
PBX1-202ENST00000367897 WRNQ14191 1432 aaPredicted RBP eCLIP42.36■■■■■ 4.379e-6■■■■■ 50.1
PBX1-202ENST00000367897 SYNJ1O43426 1573 aa42.27■■■■■ 4.36
PBX1-202ENST00000367897 BIVM-ERCC5R4GMW8 1640 aa42.26■■■■■ 4.36
PBX1-202ENST00000367897 TOP2BQ02880 1626 aa42.25■■■■■ 4.35
PBX1-202ENST00000367897 POLA1P09884 1462 aaPredicted RBP42.17■■■■■ 4.34
PBX1-202ENST00000367897 FGD5Q6ZNL6 1462 aa42.16■■■■■ 4.34
PBX1-202ENST00000367897 IFT140Q96RY7 1462 aa42.05■■■■■ 4.32
PBX1-202ENST00000367897 TARBP1Q13395 1621 aaKnown RBP42.02■■■■■ 4.32
PBX1-202ENST00000367897 SOGA1O94964 1423 aa41.99■■■■■ 4.31
PBX1-202ENST00000367897 RAD54L2Q9Y4B4 1467 aa41.98■■■■■ 4.31
PBX1-202ENST00000367897 WDR97A6NE52 1622 aa41.86■■■■■ 4.29
PBX1-202ENST00000367897 ZNF608Q9ULD9 1512 aaPredicted RBP41.81■■■■■ 4.28
PBX1-202ENST00000367897 ABCA10Q8WWZ4 1543 aa41.79■■■■■ 4.28
PBX1-202ENST00000367897 TRIM41Q8WV44 630 aa41.78■■■■■ 4.28
PBX1-202ENST00000367897 EIF4G3O43432 1585 aaKnown RBP41.72■■■■■ 4.27
PBX1-202ENST00000367897 CHIC1Q5VXU3 224 aa41.7■■■■■ 4.27
PBX1-202ENST00000367897 TDRD9Q8NDG6 1382 aaKnown RBP41.66■■■■■ 4.26
PBX1-202ENST00000367897 AQRO60306 1485 aaKnown RBP eCLIP41.65■■■■■ 4.26
PBX1-202ENST00000367897 ABCA5Q8WWZ7 1642 aa41.61■■■■■ 4.25
PBX1-202ENST00000367897 GAPVD1Q14C86 1478 aa41.53■■■■■ 4.24
PBX1-202ENST00000367897 PBRM1Q86U86 1689 aa41.49■■■■■ 4.23
PBX1-202ENST00000367897 GRIN2BQ13224 1484 aa41.43■■■■■ 4.22
PBX1-202ENST00000367897 KIF27Q86VH2 1401 aa41.42■■■■■ 4.22
PBX1-202ENST00000367897 ERICH3Q5RHP9 1530 aa41.31■■■■■ 4.2
PBX1-202ENST00000367897 SNAPC4Q5SXM2 1469 aa41.3■■■■■ 4.2
PBX1-202ENST00000367897 MAGI1Q96QZ7 1491 aaPredicted RBP41.27■■■■■ 4.2
PBX1-202ENST00000367897 RUSC2Q8N2Y8 1516 aa41.27■■■■■ 4.2
PBX1-202ENST00000367897 IGF1RP08069 1367 aa41.17■■■■■ 4.18
PBX1-202ENST00000367897 ADAMTS12P58397 1594 aa41.15■■■■■ 4.18
PBX1-202ENST00000367897 CHD1O14646 1710 aa41.11■■■■■ 4.17
PBX1-202ENST00000367897 CUL7Q14999 1698 aa41.1■■■■■ 4.17
PBX1-202ENST00000367897 SYNJ2O15056 1496 aa41.1■■■■■ 4.17
PBX1-202ENST00000367897 FHAD1B1AJZ9 1412 aa41.07■■■■■ 4.16
PBX1-202ENST00000367897 EEA1Q15075 1411 aa41.06■■■■■ 4.16
PBX1-202ENST00000367897 FBLN2P98095 1184 aa40.99■■■■■ 4.15
PBX1-202ENST00000367897 CHMP7Q8WUX9 453 aaPredicted RBP40.99■■■■■ 4.15
PBX1-202ENST00000367897 CARMIL1Q5VZK9 1371 aa40.93■■■■■ 4.14
PBX1-202ENST00000367897 GRIN2AQ12879 1464 aa40.91■■■■■ 4.14
PBX1-202ENST00000367897 FAM9AQ8IZU1 332 aaPredicted RBP40.9■■■■■ 4.14
PBX1-202ENST00000367897 CSRNP3Q8WYN3 585 aa40.89■■■■■ 4.14
PBX1-202ENST00000367897 OSCARQ8IYS5 282 aa40.82■■■■■ 4.12
PBX1-202ENST00000367897 PRXQ9BXM0 1461 aa40.8■■■■■ 4.12
PBX1-202ENST00000367897 RAPGEF2Q9Y4G8 1499 aa40.78■■■■■ 4.12
PBX1-202ENST00000367897 CEP170Q5SW79 1584 aa40.71■■■■■ 4.11
PBX1-202ENST00000367897 NUP160Q12769 1436 aa40.7■■■■■ 4.11
PBX1-202ENST00000367897 KIF21BO75037 1637 aa40.64■■■■■ 4.1
PBX1-202ENST00000367897 CLASP1Q7Z460 1538 aa40.62■■■■■ 4.09
PBX1-202ENST00000367897 CTTNBP2Q8WZ74 1663 aa40.46■■■■■ 4.07
PBX1-202ENST00000367897 KIAA0586Q9BVV6 1533 aa40.46■■■■■ 4.07
Retrieved 100 of 20,778 RNA–protein pairs in 64.8 ms