RNA–Protein interactions for RNA: ENST00000378467.8

FAM107B-205, Transcript of family with sequence similarity 107 member B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FAM107B, Length 2,374 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM107B-205ENST00000378467 NISCHQ9Y2I1 1504 aa52.46■■■■■ 5.99
FAM107B-205ENST00000378467 CCDC180Q9P1Z9 1646 aa44.9■■■■■ 4.78
FAM107B-205ENST00000378467 ZCCHC6Q5VYS8 1495 aaKnown RBP44.37■■■■■ 4.69
FAM107B-205ENST00000378467 SHROOM4Q9ULL8 1493 aa44.15■■■■■ 4.66
FAM107B-205ENST00000378467 DCAF1Q9Y4B6 1507 aa43.23■■■■■ 4.51
FAM107B-205ENST00000378467 SUPT5HO00267 1087 aaKnown RBP43.19■■■■■ 4.5
FAM107B-205ENST00000378467 DCAF8L2P0C7V8 631 aa43.09■■■■■ 4.49
FAM107B-205ENST00000378467 MYO15BQ96JP2 1530 aa42.11■■■■■ 4.33
FAM107B-205ENST00000378467 CHIC1Q5VXU3 224 aa42.05■■■■■ 4.32
FAM107B-205ENST00000378467 ABCC9O60706 1549 aa41.84■■■■■ 4.29
FAM107B-205ENST00000378467 SCRIBQ14160 1630 aa41.76■■■■■ 4.27
FAM107B-205ENST00000378467 NACADO15069 1562 aa41.49■■■■■ 4.23
FAM107B-205ENST00000378467 RSF1Q96T23 1441 aaPredicted RBP41.34■■■■■ 4.21
FAM107B-205ENST00000378467 RB1CC1Q8TDY2 1594 aa40.95■■■■■ 4.15
FAM107B-205ENST00000378467 CECR2Q9BXF3 1484 aa40.79■■■■■ 4.12
FAM107B-205ENST00000378467 MROH2BQ7Z745 1585 aa40.69■■■■■ 4.1
FAM107B-205ENST00000378467 LOC105371045A0A1W2PR82 267 aa40.63■■■■■ 4.09
FAM107B-205ENST00000378467 WIZO95785 1651 aa40.46■■■■■ 4.07
FAM107B-205ENST00000378467 TRIM41Q8WV44 630 aa40.38■■■■■ 4.05
FAM107B-205ENST00000378467 PCGF6Q9BYE7 350 aa40.35■■■■■ 4.05
FAM107B-205ENST00000378467 BAZ1AQ9NRL2 1556 aaPredicted RBP40.34■■■■■ 4.05
FAM107B-205ENST00000378467 HRCP23327 699 aa40.34■■■■■ 4.05
FAM107B-205ENST00000378467 UNC13AQ9UPW8 1703 aa40.21■■■■■ 4.03
FAM107B-205ENST00000378467 SMARCA4P51532 1647 aa40.02■■■■■ 4
FAM107B-205ENST00000378467 EIF4G1Q04637 1599 aaKnown RBP39.97■■■■□ 3.99
FAM107B-205ENST00000378467 TOP2AP11388 1531 aaKnown RBP39.94■■■■□ 3.98
FAM107B-205ENST00000378467 FAM9AQ8IZU1 332 aaPredicted RBP39.84■■■■□ 3.97
FAM107B-205ENST00000378467 TRIM26Q12899 539 aaPredicted RBP39.82■■■■□ 3.96
FAM107B-205ENST00000378467 BICRAQ9NZM4 1560 aa39.68■■■■□ 3.94
FAM107B-205ENST00000378467 SMARCA2P51531 1590 aa39.67■■■■□ 3.94
FAM107B-205ENST00000378467 CCDC88BA6NC98 1476 aa39.65■■■■□ 3.94
FAM107B-205ENST00000378467 PABPN1Q86U42 306 aaKnown RBP eCLIP39.43■■■■□ 3.9
FAM107B-205ENST00000378467 ABCC8Q09428 1581 aa39.4■■■■□ 3.9
FAM107B-205ENST00000378467 PEG3Q9GZU2 1588 aa39.38■■■■□ 3.89
FAM107B-205ENST00000378467 EHMT2Q96KQ7 1210 aa39.35■■■■□ 3.89
FAM107B-205ENST00000378467 PPARGC1BQ86YN6 1023 aaKnown RBP39.33■■■■□ 3.89
FAM107B-205ENST00000378467 ATAD2BQ9ULI0 1458 aa39■■■■□ 3.83
FAM107B-205ENST00000378467 SOGA1O94964 1423 aa38.96■■■■□ 3.83
FAM107B-205ENST00000378467 EEA1Q15075 1411 aa38.96■■■■□ 3.83
FAM107B-205ENST00000378467 ZEB1P37275 1124 aaPredicted RBP38.92■■■■□ 3.82
FAM107B-205ENST00000378467 BAZ1BQ9UIG0 1483 aaKnown RBP38.86■■■■□ 3.81
FAM107B-205ENST00000378467 WRNQ14191 1432 aaPredicted RBP eCLIP38.84■■■■□ 3.81
FAM107B-205ENST00000378467 RUSC2Q8N2Y8 1516 aa38.77■■■■□ 3.8
FAM107B-205ENST00000378467 TNIKQ9UKE5 1360 aa38.76■■■■□ 3.8
FAM107B-205ENST00000378467 CSRNP3Q8WYN3 585 aa38.74■■■■□ 3.79
FAM107B-205ENST00000378467 CEP162Q5TB80 1403 aa38.73■■■■□ 3.79
FAM107B-205ENST00000378467 SYNJ1O43426 1573 aa38.68■■■■□ 3.78
FAM107B-205ENST00000378467 GOLGA3Q08378 1498 aa38.59■■■■□ 3.77
FAM107B-205ENST00000378467 UBTFP17480 764 aaKnown RBP38.45■■■■□ 3.75
FAM107B-205ENST00000378467 KIF21BO75037 1637 aa38.44■■■■□ 3.74
FAM107B-205ENST00000378467 CEP164Q9UPV0 1460 aa38.41■■■■□ 3.74
FAM107B-205ENST00000378467 HMGXB3Q12766 1538 aa38.38■■■■□ 3.74
FAM107B-205ENST00000378467 NCAPD3P42695 1498 aa38.34■■■■□ 3.73
FAM107B-205ENST00000378467 TOP2BQ02880 1626 aa38.32■■■■□ 3.72
FAM107B-205ENST00000378467 BIVM-ERCC5R4GMW8 1640 aa38.23■■■■□ 3.71
FAM107B-205ENST00000378467 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP38.12■■■■□ 3.69
FAM107B-205ENST00000378467 TTBK1Q5TCY1 1321 aaPredicted RBP38.07■■■■□ 3.69
FAM107B-205ENST00000378467 RAPGEF2Q9Y4G8 1499 aa38.07■■■■□ 3.69
FAM107B-205ENST00000378467 CLIP1P30622 1438 aa38.07■■■■□ 3.68
FAM107B-205ENST00000378467 CCER1Q8TC90 406 aaPredicted RBP38.05■■■■□ 3.68
FAM107B-205ENST00000378467 CFTRP13569 1480 aa37.95■■■■□ 3.66
FAM107B-205ENST00000378467 VPS8Q8N3P4 1428 aa37.93■■■■□ 3.66
FAM107B-205ENST00000378467 CUX1P39880 1505 aa37.92■■■■□ 3.66
FAM107B-205ENST00000378467 ERICH3Q5RHP9 1530 aa37.88■■■■□ 3.65
FAM107B-205ENST00000378467 PRXQ9BXM0 1461 aa37.84■■■■□ 3.65
FAM107B-205ENST00000378467 PRDM2Q13029 1718 aa37.79■■■■□ 3.64
FAM107B-205ENST00000378467 KIF27Q86VH2 1401 aa37.69■■■■□ 3.62
FAM107B-205ENST00000378467 APLP2Q06481 763 aa37.59■■■■□ 3.61
FAM107B-205ENST00000378467 RANGAP1P46060 587 aaPredicted RBP37.54■■■■□ 3.6
FAM107B-205ENST00000378467 ARAP1Q96P48 1450 aa37.53■■■■□ 3.6
FAM107B-205ENST00000378467 CADPSQ9ULU8 1353 aa37.51■■■■□ 3.6
FAM107B-205ENST00000378467 CC2D2AQ9P2K1 1620 aa37.43■■■■□ 3.58
FAM107B-205ENST00000378467 HNRNPUL2Q1KMD3 747 aaKnown RBP37.39■■■■□ 3.58
FAM107B-205ENST00000378467 CUX2O14529 1486 aa37.32■■■■□ 3.56
FAM107B-205ENST00000378467 FGD5Q6ZNL6 1462 aa37.26■■■■□ 3.56
FAM107B-205ENST00000378467 IGF1RP08069 1367 aa37.26■■■■□ 3.56
FAM107B-205ENST00000378467 ARHGAP35Q9NRY4 1499 aa37.24■■■■□ 3.55
FAM107B-205ENST00000378467 DIEXFQ68CQ4 756 aaKnown RBP37.19■■■■□ 3.54
FAM107B-205ENST00000378467 FANCD2Q9BXW9 1451 aa37.14■■■■□ 3.54
FAM107B-205ENST00000378467 KANK4Q5T7N3 995 aaPredicted RBP37.13■■■■□ 3.53
FAM107B-205ENST00000378467 CARMIL1Q5VZK9 1371 aa37.08■■■■□ 3.53
FAM107B-205ENST00000378467 ZNF316A6NFI3 1004 aaPredicted RBP37.05■■■■□ 3.52
FAM107B-205ENST00000378467 RRBP1Q9P2E9 1410 aaKnown RBP37.04■■■■□ 3.52
FAM107B-205ENST00000378467 DNMBPQ6XZF7 1577 aa37.03■■■■□ 3.52
FAM107B-205ENST00000378467 TOPBP1Q92547 1522 aa36.91■■■■□ 3.5
FAM107B-205ENST00000378467 MAP3K1Q13233 1512 aa36.9■■■■□ 3.5
FAM107B-205ENST00000378467 ABCA10Q8WWZ4 1543 aa36.9■■■■□ 3.5
FAM107B-205ENST00000378467 SCAF1Q9H7N4 1312 aaKnown RBP36.9■■■■□ 3.5
FAM107B-205ENST00000378467 CLSPNQ9HAW4 1339 aa36.88■■■■□ 3.49
FAM107B-205ENST00000378467 POLA1P09884 1462 aaPredicted RBP36.86■■■■□ 3.49
FAM107B-205ENST00000378467 NESP48681 1621 aa36.86■■■■□ 3.49
FAM107B-205ENST00000378467 TIAM1Q13009 1591 aa36.85■■■■□ 3.49
FAM107B-205ENST00000378467 RAD54L2Q9Y4B4 1467 aa36.84■■■■□ 3.49
FAM107B-205ENST00000378467 DHX57Q6P158 1386 aaKnown RBP36.83■■■■□ 3.49
FAM107B-205ENST00000378467 CCNB3Q8WWL7 1395 aa36.82■■■■□ 3.49
FAM107B-205ENST00000378467 LAMC3Q9Y6N6 1575 aa36.77■■■■□ 3.48
FAM107B-205ENST00000378467 ACIN1Q9UKV3 1341 aaKnown RBP36.74■■■■□ 3.47
FAM107B-205ENST00000378467 CUL7Q14999 1698 aa36.73■■■■□ 3.47
FAM107B-205ENST00000378467 FHAD1B1AJZ9 1412 aa36.72■■■■□ 3.47
FAM107B-205ENST00000378467 LRRC9Q6ZRR7 1453 aa36.67■■■■□ 3.46
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms