Protein–RNA interactions for Protein: P51148

RAB5C, Ras-related protein Rab-5C, humanhuman

Predictions only

Length 216 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5CP51148 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC19.67■□□□□ 0.74
RAB5CP51148 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
RAB5CP51148 SLC35D2-201ENST00000253270 1613 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
RAB5CP51148 MSX2-202ENST00000507785 1188 ntTSL 2 BASIC19.67■□□□□ 0.74
RAB5CP51148 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
RAB5CP51148 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC19.67■□□□□ 0.74
RAB5CP51148 MED17-227ENST00000640521 2047 ntTSL 5 BASIC19.66■□□□□ 0.74
RAB5CP51148 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC19.66■□□□□ 0.74
RAB5CP51148 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
RAB5CP51148 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
RAB5CP51148 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC19.65■□□□□ 0.74
RAB5CP51148 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
RAB5CP51148 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
RAB5CP51148 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
RAB5CP51148 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
RAB5CP51148 SAP30-201ENST00000296504 1108 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
RAB5CP51148 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
RAB5CP51148 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC19.65■□□□□ 0.74
RAB5CP51148 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
RAB5CP51148 CLDN5-201ENST00000403084 2357 ntBASIC19.64■□□□□ 0.74
RAB5CP51148 AC079834.2-201ENST00000609776 1949 ntBASIC19.64■□□□□ 0.73
RAB5CP51148 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.73
RAB5CP51148 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
RAB5CP51148 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
RAB5CP51148 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
RAB5CP51148 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
RAB5CP51148 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
RAB5CP51148 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC19.63■□□□□ 0.73
RAB5CP51148 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
RAB5CP51148 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
RAB5CP51148 STUB1-201ENST00000219548 1472 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
RAB5CP51148 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
RAB5CP51148 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
RAB5CP51148 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
RAB5CP51148 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
RAB5CP51148 LY6K-203ENST00000519387 963 ntAPPRIS ALT2 TSL 2 BASIC19.61■□□□□ 0.73
RAB5CP51148 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
RAB5CP51148 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC19.61■□□□□ 0.73
RAB5CP51148 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
RAB5CP51148 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
RAB5CP51148 NPC2-207ENST00000555619 1035 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
RAB5CP51148 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
RAB5CP51148 SSBP4-201ENST00000270061 1768 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
RAB5CP51148 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
RAB5CP51148 AL139393.1-201ENST00000417479 573 ntTSL 5 BASIC19.59■□□□□ 0.73
RAB5CP51148 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
RAB5CP51148 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
RAB5CP51148 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
RAB5CP51148 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
RAB5CP51148 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.73
RAB5CP51148 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.73
RAB5CP51148 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC19.58■□□□□ 0.73
RAB5CP51148 PRELID2-202ENST00000394450 1102 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
RAB5CP51148 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
RAB5CP51148 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
RAB5CP51148 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC19.58■□□□□ 0.72
RAB5CP51148 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
RAB5CP51148 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
RAB5CP51148 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC19.58■□□□□ 0.72
RAB5CP51148 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC19.58■□□□□ 0.72
RAB5CP51148 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC19.57■□□□□ 0.72
RAB5CP51148 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
RAB5CP51148 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC19.57■□□□□ 0.72
RAB5CP51148 MEST-211ENST00000437945 1455 ntTSL 5 BASIC19.57■□□□□ 0.72
RAB5CP51148 AL031258.1-201ENST00000623562 325 ntBASIC19.57■□□□□ 0.72
RAB5CP51148 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
RAB5CP51148 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC19.57■□□□□ 0.72
RAB5CP51148 AC068473.5-201ENST00000616428 2072 ntBASIC19.56■□□□□ 0.72
RAB5CP51148 TP53I13-201ENST00000301057 1530 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
RAB5CP51148 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
RAB5CP51148 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
RAB5CP51148 QDPR-201ENST00000281243 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
RAB5CP51148 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
RAB5CP51148 NKX1-1-201ENST00000422806 1236 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
RAB5CP51148 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC19.55■□□□□ 0.72
RAB5CP51148 TSPAN10-203ENST00000574882 1837 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
RAB5CP51148 AC138932.3-201ENST00000567634 1902 ntBASIC19.55■□□□□ 0.72
RAB5CP51148 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC19.55■□□□□ 0.72
RAB5CP51148 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
RAB5CP51148 AC022211.4-201ENST00000625094 2161 ntBASIC19.54■□□□□ 0.72
RAB5CP51148 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
RAB5CP51148 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
RAB5CP51148 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
RAB5CP51148 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
RAB5CP51148 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC19.54■□□□□ 0.72
RAB5CP51148 WHAMMP3-201ENST00000611636 1609 ntBASIC19.54■□□□□ 0.72
RAB5CP51148 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC19.54■□□□□ 0.72
RAB5CP51148 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC19.54■□□□□ 0.72
RAB5CP51148 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
RAB5CP51148 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC19.53■□□□□ 0.72
RAB5CP51148 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
RAB5CP51148 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
RAB5CP51148 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
RAB5CP51148 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
RAB5CP51148 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
RAB5CP51148 CRIP1-201ENST00000330233 1311 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
RAB5CP51148 GTF2E2-201ENST00000355904 1762 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
RAB5CP51148 AC010501.1-201ENST00000606270 1962 ntBASIC19.52■□□□□ 0.72
RAB5CP51148 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
RAB5CP51148 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 28 ms