RNA–Protein interactions for RNA: ENST00000393099.3

RPL13-202, Transcript of ribosomal protein L13, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPL13, Length 2,385 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL13-202ENST00000393099 NISCHQ9Y2I1 1504 aa47.63■■■■■ 5.22
RPL13-202ENST00000393099 CCDC180Q9P1Z9 1646 aa41.29■■■■■ 4.2
RPL13-202ENST00000393099 ZCCHC6Q5VYS8 1495 aaKnown RBP40.12■■■■■ 4.01
RPL13-202ENST00000393099 DCAF1Q9Y4B6 1507 aa39.38■■■■□ 3.89
RPL13-202ENST00000393099 SHROOM4Q9ULL8 1493 aa39.23■■■■□ 3.87
RPL13-202ENST00000393099 DCAF8L2P0C7V8 631 aa39.15■■■■□ 3.86
RPL13-202ENST00000393099 MYO15BQ96JP2 1530 aa38.7■■■■□ 3.79
RPL13-202ENST00000393099 ABCC9O60706 1549 aa38.57■■■■□ 3.76
RPL13-202ENST00000393099 NACADO15069 1562 aa38.32■■■■□ 3.72
RPL13-202ENST00000393099 SCRIBQ14160 1630 aa38.06■■■■□ 3.68
RPL13-202ENST00000393099 SUPT5HO00267 1087 aaKnown RBP38■■■■□ 3.67
RPL13-202ENST00000393099 RB1CC1Q8TDY2 1594 aa37.87■■■■□ 3.65
RPL13-202ENST00000393099 UNC13AQ9UPW8 1703 aa37.22■■■■□ 3.55
RPL13-202ENST00000393099 RSF1Q96T23 1441 aaPredicted RBP37.16■■■■□ 3.54
RPL13-202ENST00000393099 HRCP23327 699 aa37.11■■■■□ 3.53
RPL13-202ENST00000393099 CECR2Q9BXF3 1484 aa36.98■■■■□ 3.51
RPL13-202ENST00000393099 MROH2BQ7Z745 1585 aa36.84■■■■□ 3.49
RPL13-202ENST00000393099 BICRAQ9NZM4 1560 aa36.76■■■■□ 3.47
RPL13-202ENST00000393099 BAZ1AQ9NRL2 1556 aaPredicted RBP36.73■■■■□ 3.47
RPL13-202ENST00000393099 CHIC1Q5VXU3 224 aa36.67■■■■□ 3.46
RPL13-202ENST00000393099 WIZO95785 1651 aa36.59■■■■□ 3.45
RPL13-202ENST00000393099 SMARCA4P51532 1647 aa36.52■■■■□ 3.44
RPL13-202ENST00000393099 PABPN1Q86U42 306 aaKnown RBP eCLIP36.48■■■■□ 3.432e-10■□□□□ 10.4
RPL13-202ENST00000393099 PCGF6Q9BYE7 350 aa36.41■■■■□ 3.42
RPL13-202ENST00000393099 PPARGC1BQ86YN6 1023 aaKnown RBP36.19■■■■□ 3.38
RPL13-202ENST00000393099 TOP2AP11388 1531 aaKnown RBP36.18■■■■□ 3.38
RPL13-202ENST00000393099 PEG3Q9GZU2 1588 aa36.04■■■■□ 3.36
RPL13-202ENST00000393099 SMARCA2P51531 1590 aa35.88■■■■□ 3.33
RPL13-202ENST00000393099 CCDC88BA6NC98 1476 aa35.83■■■■□ 3.33
RPL13-202ENST00000393099 EIF4G1Q04637 1599 aaKnown RBP35.82■■■■□ 3.32
RPL13-202ENST00000393099 ATAD2BQ9ULI0 1458 aa35.77■■■■□ 3.32
RPL13-202ENST00000393099 TRIM41Q8WV44 630 aa35.68■■■■□ 3.3
RPL13-202ENST00000393099 BAZ1BQ9UIG0 1483 aaKnown RBP35.59■■■■□ 3.29
RPL13-202ENST00000393099 LOC105371045A0A1W2PR82 267 aa35.46■■■■□ 3.27
RPL13-202ENST00000393099 TRIM26Q12899 539 aaPredicted RBP35.45■■■■□ 3.27
RPL13-202ENST00000393099 PELP1Q8IZL8 1130 aaKnown RBP35.4■■■■□ 3.26
RPL13-202ENST00000393099 NCAPD3P42695 1498 aa35.37■■■■□ 3.25
RPL13-202ENST00000393099 HMGXB3Q12766 1538 aa35.36■■■■□ 3.25
RPL13-202ENST00000393099 ABCC8Q09428 1581 aa35.26■■■■□ 3.24
RPL13-202ENST00000393099 ZEB1P37275 1124 aaPredicted RBP35.12■■■■□ 3.21
RPL13-202ENST00000393099 FAM9AQ8IZU1 332 aaPredicted RBP35.06■■■■□ 3.2
RPL13-202ENST00000393099 WRNQ14191 1432 aaPredicted RBP eCLIP34.94■■■■□ 3.18
RPL13-202ENST00000393099 CC2D2AQ9P2K1 1620 aa34.94■■■■□ 3.18
RPL13-202ENST00000393099 SCAF1Q9H7N4 1312 aaKnown RBP34.86■■■■□ 3.17
RPL13-202ENST00000393099 SYNJ1O43426 1573 aa34.81■■■■□ 3.16
RPL13-202ENST00000393099 CFTRP13569 1480 aa34.73■■■■□ 3.15
RPL13-202ENST00000393099 EEA1Q15075 1411 aa34.71■■■■□ 3.15
RPL13-202ENST00000393099 SOGA1O94964 1423 aa34.7■■■■□ 3.15
RPL13-202ENST00000393099 PRDM2Q13029 1718 aa34.65■■■■□ 3.14
RPL13-202ENST00000393099 TOP2BQ02880 1626 aa34.63■■■■□ 3.13
RPL13-202ENST00000393099 BIVM-ERCC5R4GMW8 1640 aa34.59■■■■□ 3.13
RPL13-202ENST00000393099 RUSC2Q8N2Y8 1516 aa34.55■■■■□ 3.12
RPL13-202ENST00000393099 EHMT2Q96KQ7 1210 aa34.54■■■■□ 3.12
RPL13-202ENST00000393099 CADPSQ9ULU8 1353 aa34.49■■■■□ 3.11
RPL13-202ENST00000393099 CSRNP3Q8WYN3 585 aa34.48■■■■□ 3.11
RPL13-202ENST00000393099 CUX1P39880 1505 aa34.41■■■■□ 3.1
RPL13-202ENST00000393099 TNIKQ9UKE5 1360 aa34.27■■■■□ 3.08
RPL13-202ENST00000393099 GOLGA3Q08378 1498 aa34.27■■■■□ 3.08
RPL13-202ENST00000393099 KIF21BO75037 1637 aa34.27■■■■□ 3.08
RPL13-202ENST00000393099 CEP164Q9UPV0 1460 aa34.22■■■■□ 3.07
RPL13-202ENST00000393099 ACIN1Q9UKV3 1341 aaKnown RBP34.17■■■■□ 3.06
RPL13-202ENST00000393099 CEP162Q5TB80 1403 aa34.13■■■■□ 3.05
RPL13-202ENST00000393099 FANCD2Q9BXW9 1451 aa34.12■■■■□ 3.05
RPL13-202ENST00000393099 LAMC3Q9Y6N6 1575 aa34.08■■■■□ 3.05
RPL13-202ENST00000393099 UBTFP17480 764 aaKnown RBP34.08■■■■□ 3.05
RPL13-202ENST00000393099 NESP48681 1621 aa34.05■■■■□ 3.04
RPL13-202ENST00000393099 NEUROD1Q13562 356 aa34.03■■■■□ 3.04
RPL13-202ENST00000393099 KIF27Q86VH2 1401 aa34.01■■■■□ 3.03
RPL13-202ENST00000393099 RAPGEF2Q9Y4G8 1499 aa33.97■■■■□ 3.03
RPL13-202ENST00000393099 MYT1Q01538 1121 aa33.96■■■■□ 3.03
RPL13-202ENST00000393099 ERICH3Q5RHP9 1530 aa33.93■■■■□ 3.02
RPL13-202ENST00000393099 FGD5Q6ZNL6 1462 aa33.93■■■■□ 3.02
RPL13-202ENST00000393099 PRXQ9BXM0 1461 aa33.93■■■■□ 3.02
RPL13-202ENST00000393099 DNMBPQ6XZF7 1577 aa33.92■■■■□ 3.02
RPL13-202ENST00000393099 DNAJC5BQ9UF47 199 aa33.9■■■■□ 3.02
RPL13-202ENST00000393099 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP33.85■■■■□ 3.01
RPL13-202ENST00000393099 TOPBP1Q92547 1522 aa33.82■■■■□ 3.01
RPL13-202ENST00000393099 CCER1Q8TC90 406 aaPredicted RBP33.82■■■■□ 3
RPL13-202ENST00000393099 GTF3C3Q9Y5Q9 886 aa33.81■■■■□ 3
RPL13-202ENST00000393099 CUX2O14529 1486 aa33.81■■■■□ 3
RPL13-202ENST00000393099 CENPBP07199 599 aaPredicted RBP33.8■■■■□ 3
RPL13-202ENST00000393099 PDS5BQ9NTI5 1447 aa33.78■■■■□ 3
RPL13-202ENST00000393099 CLIP1P30622 1438 aa33.74■■■□□ 2.99
RPL13-202ENST00000393099 DIEXFQ68CQ4 756 aaKnown RBP33.74■■■□□ 2.99
RPL13-202ENST00000393099 POLA1P09884 1462 aaPredicted RBP33.7■■■□□ 2.99
RPL13-202ENST00000393099 URB2Q14146 1524 aaKnown RBP33.68■■■□□ 2.98
RPL13-202ENST00000393099 KIF21AQ7Z4S6 1674 aa33.67■■■□□ 2.98
RPL13-202ENST00000393099 IGF1RP08069 1367 aa33.67■■■□□ 2.98
RPL13-202ENST00000393099 ABCA10Q8WWZ4 1543 aa33.65■■■□□ 2.98
RPL13-202ENST00000393099 RAD54L2Q9Y4B4 1467 aa33.6■■■□□ 2.97
RPL13-202ENST00000393099 VPS8Q8N3P4 1428 aa33.53■■■□□ 2.96
RPL13-202ENST00000393099 WDR97A6NE52 1622 aa33.52■■■□□ 2.96
RPL13-202ENST00000393099 CARMIL1Q5VZK9 1371 aa33.5■■■□□ 2.95
RPL13-202ENST00000393099 CUL7Q14999 1698 aa33.37■■■□□ 2.93
RPL13-202ENST00000393099 RANGAP1P46060 587 aaPredicted RBP33.37■■■□□ 2.93
RPL13-202ENST00000393099 ARAP1Q96P48 1450 aa33.36■■■□□ 2.93
RPL13-202ENST00000393099 ABCA5Q8WWZ7 1642 aa33.35■■■□□ 2.93
RPL13-202ENST00000393099 MRC2Q9UBG0 1479 aa33.33■■■□□ 2.93
RPL13-202ENST00000393099 TARBP1Q13395 1621 aaKnown RBP33.3■■■□□ 2.92
RPL13-202ENST00000393099 ARHGAP35Q9NRY4 1499 aa33.26■■■□□ 2.91
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms