RNA–Protein interactions for RNA: ENST00000358438.6

POLR2J2-202, Transcript of RNA polymerase II subunit J2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene POLR2J2, Length 2,065 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J2-202ENST00000358438 NISCHQ9Y2I1 1504 aa49.58■■■■■ 5.53
POLR2J2-202ENST00000358438 CCDC180Q9P1Z9 1646 aa43.15■■■■■ 4.5
POLR2J2-202ENST00000358438 ZCCHC6Q5VYS8 1495 aaKnown RBP41.69■■■■■ 4.26
POLR2J2-202ENST00000358438 ABCC9O60706 1549 aa41.07■■■■■ 4.17
POLR2J2-202ENST00000358438 DCAF1Q9Y4B6 1507 aa40.97■■■■■ 4.15
POLR2J2-202ENST00000358438 DCAF8L2P0C7V8 631 aa40.91■■■■■ 4.14
POLR2J2-202ENST00000358438 SHROOM4Q9ULL8 1493 aa40.61■■■■■ 4.09
POLR2J2-202ENST00000358438 MYO15BQ96JP2 1530 aa40.41■■■■■ 4.06
POLR2J2-202ENST00000358438 NACADO15069 1562 aa40.13■■■■■ 4.01
POLR2J2-202ENST00000358438 RB1CC1Q8TDY2 1594 aa39.76■■■■□ 3.96
POLR2J2-202ENST00000358438 SCRIBQ14160 1630 aa39.74■■■■□ 3.95
POLR2J2-202ENST00000358438 SUPT5HO00267 1087 aaKnown RBP39.15■■■■□ 3.86
POLR2J2-202ENST00000358438 UNC13AQ9UPW8 1703 aa39.02■■■■□ 3.84
POLR2J2-202ENST00000358438 PABPN1Q86U42 306 aaKnown RBP eCLIP38.62■■■■□ 3.77
POLR2J2-202ENST00000358438 BICRAQ9NZM4 1560 aa38.58■■■■□ 3.77
POLR2J2-202ENST00000358438 RSF1Q96T23 1441 aaPredicted RBP38.53■■■■□ 3.76
POLR2J2-202ENST00000358438 CECR2Q9BXF3 1484 aa38.53■■■■□ 3.76
POLR2J2-202ENST00000358438 MROH2BQ7Z745 1585 aa38.33■■■■□ 3.73
POLR2J2-202ENST00000358438 BAZ1AQ9NRL2 1556 aaPredicted RBP38.27■■■■□ 3.72
POLR2J2-202ENST00000358438 SMARCA4P51532 1647 aa38.09■■■■□ 3.69
POLR2J2-202ENST00000358438 WIZO95785 1651 aa38.04■■■■□ 3.68
POLR2J2-202ENST00000358438 TOP2AP11388 1531 aaKnown RBP37.62■■■■□ 3.61
POLR2J2-202ENST00000358438 PEG3Q9GZU2 1588 aa37.6■■■■□ 3.61
POLR2J2-202ENST00000358438 CHIC1Q5VXU3 224 aa37.55■■■■□ 3.6
POLR2J2-202ENST00000358438 ATAD2BQ9ULI0 1458 aa37.4■■■■□ 3.58
POLR2J2-202ENST00000358438 EIF4G1Q04637 1599 aaKnown RBP37.4■■■■□ 3.58
POLR2J2-202ENST00000358438 SMARCA2P51531 1590 aa37.39■■■■□ 3.58
POLR2J2-202ENST00000358438 CCDC88BA6NC98 1476 aa37.24■■■■□ 3.55
POLR2J2-202ENST00000358438 BAZ1BQ9UIG0 1483 aaKnown RBP37.21■■■■□ 3.55
POLR2J2-202ENST00000358438 CC2D2AQ9P2K1 1620 aa37.08■■■■□ 3.53
POLR2J2-202ENST00000358438 DNAJC5BQ9UF47 199 aa37.06■■■■□ 3.52
POLR2J2-202ENST00000358438 NCAPD3P42695 1498 aa37.04■■■■□ 3.52
POLR2J2-202ENST00000358438 HMGXB3Q12766 1538 aa37.01■■■■□ 3.52
POLR2J2-202ENST00000358438 TRIM41Q8WV44 630 aa36.78■■■■□ 3.48
POLR2J2-202ENST00000358438 ABCC8Q09428 1581 aa36.56■■■■□ 3.44
POLR2J2-202ENST00000358438 HRCP23327 699 aa36.54■■■■□ 3.44
POLR2J2-202ENST00000358438 CFTRP13569 1480 aa36.28■■■■□ 3.4
POLR2J2-202ENST00000358438 WRNQ14191 1432 aaPredicted RBP eCLIP36.27■■■■□ 3.4
POLR2J2-202ENST00000358438 LOC105371045A0A1W2PR82 267 aa36.14■■■■□ 3.38
POLR2J2-202ENST00000358438 SYNJ1O43426 1573 aa36.14■■■■□ 3.38
POLR2J2-202ENST00000358438 PRDM2Q13029 1718 aa36.13■■■■□ 3.37
POLR2J2-202ENST00000358438 FAM9AQ8IZU1 332 aaPredicted RBP36.13■■■■□ 3.37
POLR2J2-202ENST00000358438 CADPSQ9ULU8 1353 aa36.11■■■■□ 3.37
POLR2J2-202ENST00000358438 TOP2BQ02880 1626 aa35.96■■■■□ 3.35
POLR2J2-202ENST00000358438 BIVM-ERCC5R4GMW8 1640 aa35.92■■■■□ 3.34
POLR2J2-202ENST00000358438 SOGA1O94964 1423 aa35.89■■■■□ 3.34
POLR2J2-202ENST00000358438 CUX1P39880 1505 aa35.82■■■■□ 3.33
POLR2J2-202ENST00000358438 EEA1Q15075 1411 aa35.82■■■■□ 3.32
POLR2J2-202ENST00000358438 NESP48681 1621 aa35.79■■■■□ 3.32
POLR2J2-202ENST00000358438 LAMC3Q9Y6N6 1575 aa35.76■■■■□ 3.32
POLR2J2-202ENST00000358438 RUSC2Q8N2Y8 1516 aa35.75■■■■□ 3.31
POLR2J2-202ENST00000358438 FANCD2Q9BXW9 1451 aa35.73■■■■□ 3.31
POLR2J2-202ENST00000358438 EHMT2Q96KQ7 1210 aa35.64■■■■□ 3.3
POLR2J2-202ENST00000358438 CSRNP3Q8WYN3 585 aa35.61■■■■□ 3.29
POLR2J2-202ENST00000358438 PELP1Q8IZL8 1130 aaKnown RBP35.53■■■■□ 3.28
POLR2J2-202ENST00000358438 CEP164Q9UPV0 1460 aa35.48■■■■□ 3.27
POLR2J2-202ENST00000358438 PDS5BQ9NTI5 1447 aa35.47■■■■□ 3.27
POLR2J2-202ENST00000358438 PCGF6Q9BYE7 350 aa35.47■■■■□ 3.27
POLR2J2-202ENST00000358438 DNMBPQ6XZF7 1577 aa35.44■■■■□ 3.26
POLR2J2-202ENST00000358438 FGD5Q6ZNL6 1462 aa35.41■■■■□ 3.26
POLR2J2-202ENST00000358438 KIF21BO75037 1637 aa35.37■■■■□ 3.25
POLR2J2-202ENST00000358438 TOPBP1Q92547 1522 aa35.36■■■■□ 3.25
POLR2J2-202ENST00000358438 KIF21AQ7Z4S6 1674 aa35.36■■■■□ 3.25
POLR2J2-202ENST00000358438 GOLGA3Q08378 1498 aa35.35■■■■□ 3.25
POLR2J2-202ENST00000358438 KIF27Q86VH2 1401 aa35.33■■■■□ 3.25
POLR2J2-202ENST00000358438 ERCC6Q03468 1493 aa35.28■■■■□ 3.24
POLR2J2-202ENST00000358438 URB2Q14146 1524 aaKnown RBP35.28■■■■□ 3.24
POLR2J2-202ENST00000358438 TNIKQ9UKE5 1360 aa35.26■■■■□ 3.24
POLR2J2-202ENST00000358438 PPARGC1BQ86YN6 1023 aaKnown RBP35.24■■■■□ 3.23
POLR2J2-202ENST00000358438 POLA1P09884 1462 aaPredicted RBP35.21■■■■□ 3.23
POLR2J2-202ENST00000358438 CUX2O14529 1486 aa35.2■■■■□ 3.23
POLR2J2-202ENST00000358438 UBTFP17480 764 aaKnown RBP35.19■■■■□ 3.22
POLR2J2-202ENST00000358438 RAPGEF2Q9Y4G8 1499 aa35.16■■■■□ 3.22
POLR2J2-202ENST00000358438 PRXQ9BXM0 1461 aa35.14■■■■□ 3.22
POLR2J2-202ENST00000358438 CEP162Q5TB80 1403 aa35.11■■■■□ 3.21
POLR2J2-202ENST00000358438 ERICH3Q5RHP9 1530 aa35.1■■■■□ 3.21
POLR2J2-202ENST00000358438 RAD54L2Q9Y4B4 1467 aa35.1■■■■□ 3.21
POLR2J2-202ENST00000358438 ABCA10Q8WWZ4 1543 aa35.08■■■■□ 3.21
POLR2J2-202ENST00000358438 MRC2Q9UBG0 1479 aa35.01■■■■□ 3.19
POLR2J2-202ENST00000358438 IGF1RP08069 1367 aa35■■■■□ 3.19
POLR2J2-202ENST00000358438 WDR97A6NE52 1622 aa34.98■■■■□ 3.19
POLR2J2-202ENST00000358438 THOC2Q8NI27 1593 aaKnown RBP34.9■■■■□ 3.18
POLR2J2-202ENST00000358438 TARBP1Q13395 1621 aaKnown RBP34.83■■■■□ 3.17
POLR2J2-202ENST00000358438 WDR62O43379 1518 aa34.83■■■■□ 3.17
POLR2J2-202ENST00000358438 CARMIL1Q5VZK9 1371 aa34.82■■■■□ 3.16
POLR2J2-202ENST00000358438 ABCA5Q8WWZ7 1642 aa34.8■■■■□ 3.16
POLR2J2-202ENST00000358438 CLIP1P30622 1438 aa34.8■■■■□ 3.16
POLR2J2-202ENST00000358438 TRIM26Q12899 539 aaPredicted RBP34.77■■■■□ 3.16
POLR2J2-202ENST00000358438 TDRD9Q8NDG6 1382 aaKnown RBP34.74■■■■□ 3.15
POLR2J2-202ENST00000358438 ZEB1P37275 1124 aaPredicted RBP34.73■■■■□ 3.15
POLR2J2-202ENST00000358438 CUL7Q14999 1698 aa34.72■■■■□ 3.15
POLR2J2-202ENST00000358438 GAPVD1Q14C86 1478 aa34.71■■■■□ 3.15
POLR2J2-202ENST00000358438 IFT140Q96RY7 1462 aa34.6■■■■□ 3.13
POLR2J2-202ENST00000358438 RANGAP1P46060 587 aaPredicted RBP34.6■■■■□ 3.13
POLR2J2-202ENST00000358438 PBRM1Q86U86 1689 aa34.53■■■■□ 3.12
POLR2J2-202ENST00000358438 VPS8Q8N3P4 1428 aa34.52■■■■□ 3.12
POLR2J2-202ENST00000358438 AQRO60306 1485 aaKnown RBP eCLIP34.49■■■■□ 3.114e-6■■■■■ 31
POLR2J2-202ENST00000358438 ZNF608Q9ULD9 1512 aaPredicted RBP34.45■■■■□ 3.1
POLR2J2-202ENST00000358438 ARAP1Q96P48 1450 aa34.44■■■■□ 3.1
POLR2J2-202ENST00000358438 ARHGAP35Q9NRY4 1499 aa34.4■■■■□ 3.1
Retrieved 100 of 20,778 RNA–protein pairs in 1345.8 ms