RNA–Protein interactions for RNA: ENST00000331559.9

MEIS3-201, Transcript of Meis homeobox 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene MEIS3, Length 2,104 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MEIS3-201ENST00000331559 NISCHQ9Y2I1 1504 aa50.29■■■■■ 5.64
MEIS3-201ENST00000331559 CCDC180Q9P1Z9 1646 aa43.41■■■■■ 4.54
MEIS3-201ENST00000331559 ZCCHC6Q5VYS8 1495 aaKnown RBP42.44■■■■■ 4.38
MEIS3-201ENST00000331559 SHROOM4Q9ULL8 1493 aa41.7■■■■■ 4.27
MEIS3-201ENST00000331559 DCAF1Q9Y4B6 1507 aa41.58■■■■■ 4.25
MEIS3-201ENST00000331559 DCAF8L2P0C7V8 631 aa41.29■■■■■ 4.2
MEIS3-201ENST00000331559 MYO15BQ96JP2 1530 aa40.75■■■■■ 4.11
MEIS3-201ENST00000331559 SUPT5HO00267 1087 aaKnown RBP40.58■■■■■ 4.09
MEIS3-201ENST00000331559 ABCC9O60706 1549 aa40.3■■■■■ 4.04
MEIS3-201ENST00000331559 NACADO15069 1562 aa40.24■■■■■ 4.03
MEIS3-201ENST00000331559 SCRIBQ14160 1630 aa40.09■■■■■ 4.01
MEIS3-201ENST00000331559 RB1CC1Q8TDY2 1594 aa39.69■■■■□ 3.94
MEIS3-201ENST00000331559 RSF1Q96T23 1441 aaPredicted RBP39.37■■■■□ 3.89
MEIS3-201ENST00000331559 CHIC1Q5VXU3 224 aa39.3■■■■□ 3.88
MEIS3-201ENST00000331559 CECR2Q9BXF3 1484 aa39.01■■■■□ 3.83
MEIS3-201ENST00000331559 MROH2BQ7Z745 1585 aa38.89■■■■□ 3.82
MEIS3-201ENST00000331559 UNC13AQ9UPW8 1703 aa38.88■■■■□ 3.81
MEIS3-201ENST00000331559 BAZ1AQ9NRL2 1556 aaPredicted RBP38.77■■■■□ 3.8
MEIS3-201ENST00000331559 WIZO95785 1651 aa38.62■■■■□ 3.77
MEIS3-201ENST00000331559 SMARCA4P51532 1647 aa38.47■■■■□ 3.75
MEIS3-201ENST00000331559 BICRAQ9NZM4 1560 aa38.46■■■■□ 3.75
MEIS3-201ENST00000331559 TOP2AP11388 1531 aaKnown RBP38.26■■■■□ 3.72
MEIS3-201ENST00000331559 PABPN1Q86U42 306 aaKnown RBP eCLIP38.19■■■■□ 3.7
MEIS3-201ENST00000331559 TRIM41Q8WV44 630 aa38.09■■■■□ 3.69
MEIS3-201ENST00000331559 EIF4G1Q04637 1599 aaKnown RBP37.97■■■■□ 3.67
MEIS3-201ENST00000331559 PEG3Q9GZU2 1588 aa37.95■■■■□ 3.67
MEIS3-201ENST00000331559 SMARCA2P51531 1590 aa37.92■■■■□ 3.66
MEIS3-201ENST00000331559 CCDC88BA6NC98 1476 aa37.88■■■■□ 3.65
MEIS3-201ENST00000331559 LOC105371045A0A1W2PR82 267 aa37.82■■■■□ 3.65
MEIS3-201ENST00000331559 ATAD2BQ9ULI0 1458 aa37.63■■■■□ 3.61
MEIS3-201ENST00000331559 HRCP23327 699 aa37.5■■■■□ 3.59
MEIS3-201ENST00000331559 PCGF6Q9BYE7 350 aa37.49■■■■□ 3.59
MEIS3-201ENST00000331559 BAZ1BQ9UIG0 1483 aaKnown RBP37.48■■■■□ 3.59
MEIS3-201ENST00000331559 FAM9AQ8IZU1 332 aaPredicted RBP37.42■■■■□ 3.58
MEIS3-201ENST00000331559 ABCC8Q09428 1581 aa37.38■■■■□ 3.57
MEIS3-201ENST00000331559 HMGXB3Q12766 1538 aa37.17■■■■□ 3.54
MEIS3-201ENST00000331559 NCAPD3P42695 1498 aa37.14■■■■□ 3.54
MEIS3-201ENST00000331559 WRNQ14191 1432 aaPredicted RBP eCLIP37.05■■■■□ 3.52
MEIS3-201ENST00000331559 EEA1Q15075 1411 aa37.02■■■■□ 3.52
MEIS3-201ENST00000331559 SOGA1O94964 1423 aa36.86■■■■□ 3.49
MEIS3-201ENST00000331559 TRIM26Q12899 539 aaPredicted RBP36.86■■■■□ 3.49
MEIS3-201ENST00000331559 EHMT2Q96KQ7 1210 aa36.86■■■■□ 3.49
MEIS3-201ENST00000331559 SYNJ1O43426 1573 aa36.84■■■■□ 3.49
MEIS3-201ENST00000331559 CSRNP3Q8WYN3 585 aa36.71■■■■□ 3.47
MEIS3-201ENST00000331559 PPARGC1BQ86YN6 1023 aaKnown RBP36.68■■■■□ 3.46
MEIS3-201ENST00000331559 RUSC2Q8N2Y8 1516 aa36.66■■■■□ 3.46
MEIS3-201ENST00000331559 TOP2BQ02880 1626 aa36.63■■■■□ 3.45
MEIS3-201ENST00000331559 TNIKQ9UKE5 1360 aa36.59■■■■□ 3.45
MEIS3-201ENST00000331559 CFTRP13569 1480 aa36.57■■■■□ 3.45
MEIS3-201ENST00000331559 BIVM-ERCC5R4GMW8 1640 aa36.56■■■■□ 3.44
MEIS3-201ENST00000331559 GOLGA3Q08378 1498 aa36.54■■■■□ 3.44
MEIS3-201ENST00000331559 CEP162Q5TB80 1403 aa36.47■■■■□ 3.43
MEIS3-201ENST00000331559 CC2D2AQ9P2K1 1620 aa36.47■■■■□ 3.43
MEIS3-201ENST00000331559 KIF21BO75037 1637 aa36.46■■■■□ 3.43
MEIS3-201ENST00000331559 CEP164Q9UPV0 1460 aa36.45■■■■□ 3.43
MEIS3-201ENST00000331559 PRDM2Q13029 1718 aa36.41■■■■□ 3.42
MEIS3-201ENST00000331559 UBTFP17480 764 aaKnown RBP36.34■■■■□ 3.41
MEIS3-201ENST00000331559 CUX1P39880 1505 aa36.31■■■■□ 3.4
MEIS3-201ENST00000331559 CADPSQ9ULU8 1353 aa36.27■■■■□ 3.4
MEIS3-201ENST00000331559 RAPGEF2Q9Y4G8 1499 aa36.08■■■■□ 3.37
MEIS3-201ENST00000331559 ERICH3Q5RHP9 1530 aa36.06■■■■□ 3.36
MEIS3-201ENST00000331559 KIF27Q86VH2 1401 aa36.04■■■■□ 3.36
MEIS3-201ENST00000331559 ZEB1P37275 1124 aaPredicted RBP36.01■■■■□ 3.36
MEIS3-201ENST00000331559 PRXQ9BXM0 1461 aa36.01■■■■□ 3.36
MEIS3-201ENST00000331559 CLIP1P30622 1438 aa35.98■■■■□ 3.35
MEIS3-201ENST00000331559 FANCD2Q9BXW9 1451 aa35.88■■■■□ 3.33
MEIS3-201ENST00000331559 VPS8Q8N3P4 1428 aa35.8■■■■□ 3.32
MEIS3-201ENST00000331559 FGD5Q6ZNL6 1462 aa35.79■■■■□ 3.32
MEIS3-201ENST00000331559 CUX2O14529 1486 aa35.74■■■■□ 3.31
MEIS3-201ENST00000331559 LAMC3Q9Y6N6 1575 aa35.73■■■■□ 3.31
MEIS3-201ENST00000331559 DNMBPQ6XZF7 1577 aa35.71■■■■□ 3.31
MEIS3-201ENST00000331559 NESP48681 1621 aa35.65■■■■□ 3.3
MEIS3-201ENST00000331559 IGF1RP08069 1367 aa35.61■■■■□ 3.29
MEIS3-201ENST00000331559 TOPBP1Q92547 1522 aa35.59■■■■□ 3.29
MEIS3-201ENST00000331559 TTBK1Q5TCY1 1321 aaPredicted RBP35.54■■■■□ 3.28
MEIS3-201ENST00000331559 APLP2Q06481 763 aa35.51■■■■□ 3.27
MEIS3-201ENST00000331559 ARAP1Q96P48 1450 aa35.5■■■■□ 3.27
MEIS3-201ENST00000331559 ABCA10Q8WWZ4 1543 aa35.49■■■■□ 3.27
MEIS3-201ENST00000331559 POLA1P09884 1462 aaPredicted RBP35.49■■■■□ 3.27
MEIS3-201ENST00000331559 RANGAP1P46060 587 aaPredicted RBP35.47■■■■□ 3.27
MEIS3-201ENST00000331559 CARMIL1Q5VZK9 1371 aa35.46■■■■□ 3.27
MEIS3-201ENST00000331559 PDS5BQ9NTI5 1447 aa35.45■■■■□ 3.27
MEIS3-201ENST00000331559 RAD54L2Q9Y4B4 1467 aa35.38■■■■□ 3.25
MEIS3-201ENST00000331559 URB2Q14146 1524 aaKnown RBP35.37■■■■□ 3.25
MEIS3-201ENST00000331559 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP35.35■■■■□ 3.25
MEIS3-201ENST00000331559 ARHGAP35Q9NRY4 1499 aa35.33■■■■□ 3.25
MEIS3-201ENST00000331559 WDR97A6NE52 1622 aa35.27■■■■□ 3.24
MEIS3-201ENST00000331559 CCER1Q8TC90 406 aaPredicted RBP35.26■■■■□ 3.24
MEIS3-201ENST00000331559 CUL7Q14999 1698 aa35.26■■■■□ 3.23
MEIS3-201ENST00000331559 DNAJC5BQ9UF47 199 aa35.25■■■■□ 3.23
MEIS3-201ENST00000331559 KIF21AQ7Z4S6 1674 aa35.21■■■■□ 3.23
MEIS3-201ENST00000331559 ABCA5Q8WWZ7 1642 aa35.11■■■■□ 3.21
MEIS3-201ENST00000331559 MAP3K1Q13233 1512 aa35.01■■■■□ 3.19
MEIS3-201ENST00000331559 GAPVD1Q14C86 1478 aa35.01■■■■□ 3.19
MEIS3-201ENST00000331559 CTTNBP2Q8WZ74 1663 aa34.98■■■■□ 3.19
MEIS3-201ENST00000331559 EFCAB5A4FU69 1503 aa34.98■■■■□ 3.19
MEIS3-201ENST00000331559 FHAD1B1AJZ9 1412 aa34.98■■■■□ 3.19
MEIS3-201ENST00000331559 KANK4Q5T7N3 995 aaPredicted RBP34.96■■■■□ 3.19
MEIS3-201ENST00000331559 TDRD9Q8NDG6 1382 aaKnown RBP34.96■■■■□ 3.19
MEIS3-201ENST00000331559 TARBP1Q13395 1621 aaKnown RBP34.95■■■■□ 3.19
Retrieved 100 of 20,778 RNA–protein pairs in 9.9 ms