RNA–Protein interactions for RNA: ENST00000615526.1

FNDC11-204, Transcript of fibronectin type III domain containing 11, humanhuman

APPRIS P1 BASIC

Gene FNDC11, Length 2,954 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC11-204ENST00000615526 NISCHQ9Y2I1 1504 aa39■■■■□ 3.83
FNDC11-204ENST00000615526 HRCP23327 699 aa36.63■■■■□ 3.46
FNDC11-204ENST00000615526 PPARGC1BQ86YN6 1023 aaKnown RBP36.37■■■■□ 3.41
FNDC11-204ENST00000615526 PCGF6Q9BYE7 350 aa36.15■■■■□ 3.38
FNDC11-204ENST00000615526 SUPT5HO00267 1087 aaKnown RBP36■■■■□ 3.35
FNDC11-204ENST00000615526 SHROOM4Q9ULL8 1493 aa35.96■■■■□ 3.35
FNDC11-204ENST00000615526 PELP1Q8IZL8 1130 aaKnown RBP35.64■■■■□ 3.3
FNDC11-204ENST00000615526 MYO15BQ96JP2 1530 aa35.3■■■■□ 3.24
FNDC11-204ENST00000615526 SCAF1Q9H7N4 1312 aaKnown RBP35.05■■■■□ 3.2
FNDC11-204ENST00000615526 CHIC1Q5VXU3 224 aa35.04■■■■□ 3.2
FNDC11-204ENST00000615526 LOC105371045A0A1W2PR82 267 aa34.67■■■■□ 3.14
FNDC11-204ENST00000615526 TRIM26Q12899 539 aaPredicted RBP34.45■■■■□ 3.11
FNDC11-204ENST00000615526 DCAF1Q9Y4B6 1507 aa34.24■■■■□ 3.07
FNDC11-204ENST00000615526 MYT1Q01538 1121 aa34.22■■■■□ 3.07
FNDC11-204ENST00000615526 ZEB1P37275 1124 aaPredicted RBP34.12■■■■□ 3.05
FNDC11-204ENST00000615526 NEUROD1Q13562 356 aa34.02■■■■□ 3.04
FNDC11-204ENST00000615526 ACIN1Q9UKV3 1341 aaKnown RBP33.96■■■■□ 3.03
FNDC11-204ENST00000615526 GTF3C3Q9Y5Q9 886 aa33.94■■■■□ 3.02
FNDC11-204ENST00000615526 CCDC180Q9P1Z9 1646 aa33.83■■■■□ 3.01
FNDC11-204ENST00000615526 DCAF8L2P0C7V8 631 aa33.8■■■■□ 3
FNDC11-204ENST00000615526 EHMT2Q96KQ7 1210 aa33.74■■■□□ 2.99
FNDC11-204ENST00000615526 CENPBP07199 599 aaPredicted RBP33.54■■■□□ 2.96
FNDC11-204ENST00000615526 FAM9AQ8IZU1 332 aaPredicted RBP33.47■■■□□ 2.95
FNDC11-204ENST00000615526 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP33.39■■■□□ 2.94
FNDC11-204ENST00000615526 DIEXFQ68CQ4 756 aaKnown RBP33.33■■■□□ 2.93
FNDC11-204ENST00000615526 YTHDC1Q96MU7 727 aaKnown RBP33.31■■■□□ 2.92
FNDC11-204ENST00000615526 CCER1Q8TC90 406 aaPredicted RBP33.28■■■□□ 2.92
FNDC11-204ENST00000615526 ZCCHC6Q5VYS8 1495 aaKnown RBP33.15■■■□□ 2.9
FNDC11-204ENST00000615526 TRIM41Q8WV44 630 aa32.96■■■□□ 2.87
FNDC11-204ENST00000615526 TTBK1Q5TCY1 1321 aaPredicted RBP32.95■■■□□ 2.86
FNDC11-204ENST00000615526 BCL11AQ9H165 835 aa32.52■■■□□ 2.8
FNDC11-204ENST00000615526 MIER1Q8N108 512 aa32.47■■■□□ 2.79
FNDC11-204ENST00000615526 ZNF316A6NFI3 1004 aaPredicted RBP32.44■■■□□ 2.78
FNDC11-204ENST00000615526 ANP32EQ9BTT0 268 aa32.19■■■□□ 2.74
FNDC11-204ENST00000615526 CSRNP3Q8WYN3 585 aa32.06■■■□□ 2.72
FNDC11-204ENST00000615526 SUPT16HQ9Y5B9 1047 aaKnown RBP32.04■■■□□ 2.72
FNDC11-204ENST00000615526 TSHZ2Q9NRE2 1034 aa31.99■■■□□ 2.71
FNDC11-204ENST00000615526 BCANQ96GW7 911 aa31.84■■■□□ 2.69
FNDC11-204ENST00000615526 HNRNPUL2Q1KMD3 747 aaKnown RBP31.83■■■□□ 2.69
FNDC11-204ENST00000615526 RSF1Q96T23 1441 aaPredicted RBP31.75■■■□□ 2.67
FNDC11-204ENST00000615526 RB1CC1Q8TDY2 1594 aa31.75■■■□□ 2.67
FNDC11-204ENST00000615526 ABCC9O60706 1549 aa31.55■■■□□ 2.64
FNDC11-204ENST00000615526 CLSPNQ9HAW4 1339 aa31.41■■■□□ 2.62
FNDC11-204ENST00000615526 UBTFP17480 764 aaKnown RBP31.41■■■□□ 2.62
FNDC11-204ENST00000615526 PRKCSHP14314 528 aaPredicted RBP31.35■■■□□ 2.61
FNDC11-204ENST00000615526 FKBP8Q14318 412 aa31.33■■■□□ 2.61
FNDC11-204ENST00000615526 CEP162Q5TB80 1403 aa31.33■■■□□ 2.61
FNDC11-204ENST00000615526 KCNH8Q96L42 1107 aa31.28■■■□□ 2.6
FNDC11-204ENST00000615526 ITGAEP38570 1179 aa31.26■■■□□ 2.6
FNDC11-204ENST00000615526 RBM19Q9Y4C8 960 aaKnown RBP31.25■■■□□ 2.59
FNDC11-204ENST00000615526 WRNQ14191 1432 aaPredicted RBP eCLIP31.17■■■□□ 2.58
FNDC11-204ENST00000615526 SCRIBQ14160 1630 aa31.17■■■□□ 2.58
FNDC11-204ENST00000615526 RANGAP1P46060 587 aaPredicted RBP31.14■■■□□ 2.57
FNDC11-204ENST00000615526 ERICH6Q7L0X2 663 aa31.05■■■□□ 2.56
FNDC11-204ENST00000615526 NEFLP07196 543 aa31.01■■■□□ 2.55
FNDC11-204ENST00000615526 MSH5O43196 834 aa30.99■■■□□ 2.55
FNDC11-204ENST00000615526 APLP2Q06481 763 aa30.93■■■□□ 2.54
FNDC11-204ENST00000615526 SOGA1O94964 1423 aa30.9■■■□□ 2.54
FNDC11-204ENST00000615526 TNIKQ9UKE5 1360 aa30.88■■■□□ 2.53
FNDC11-204ENST00000615526 CCDC88BA6NC98 1476 aa30.88■■■□□ 2.53
FNDC11-204ENST00000615526 CECR2Q9BXF3 1484 aa30.87■■■□□ 2.53
FNDC11-204ENST00000615526 TRIM52Q96A61 297 aa30.84■■■□□ 2.53
FNDC11-204ENST00000615526 ABCC8Q09428 1581 aa30.84■■■□□ 2.53
FNDC11-204ENST00000615526 MROH2BQ7Z745 1585 aa30.72■■■□□ 2.51
FNDC11-204ENST00000615526 RUSC2Q8N2Y8 1516 aa30.71■■■□□ 2.51
FNDC11-204ENST00000615526 DDX10Q13206 875 aaKnown RBP30.71■■■□□ 2.51
FNDC11-204ENST00000615526 IRX6P78412 446 aaPredicted RBP30.69■■■□□ 2.5
FNDC11-204ENST00000615526 WIZO95785 1651 aa30.64■■■□□ 2.5
FNDC11-204ENST00000615526 DEKP35659 375 aaKnown RBP30.64■■■□□ 2.5
FNDC11-204ENST00000615526 ANO8Q9HCE9 1232 aaPredicted RBP30.64■■■□□ 2.5
FNDC11-204ENST00000615526 DHX57Q6P158 1386 aaKnown RBP30.62■■■□□ 2.49
FNDC11-204ENST00000615526 HIRIP3Q9BW71 556 aaPredicted RBP30.56■■■□□ 2.48
FNDC11-204ENST00000615526 NBR1Q14596 966 aa30.53■■■□□ 2.48
FNDC11-204ENST00000615526 CDK11AQ9UQ88 783 aaPredicted RBP30.51■■■□□ 2.47
FNDC11-204ENST00000615526 GOLGA3Q08378 1498 aa30.46■■■□□ 2.47
FNDC11-204ENST00000615526 CLIP1P30622 1438 aa30.45■■■□□ 2.47
FNDC11-204ENST00000615526 FANCIQ9NVI1 1328 aa30.38■■■□□ 2.45
FNDC11-204ENST00000615526 CCDC136Q96JN2 1154 aa30.37■■■□□ 2.45
FNDC11-204ENST00000615526 SALL2Q9Y467 1007 aaPredicted RBP30.31■■■□□ 2.44
FNDC11-204ENST00000615526 VPS8Q8N3P4 1428 aa30.28■■■□□ 2.44
FNDC11-204ENST00000615526 RTN4Q9NQC3 1192 aaKnown RBP30.28■■■□□ 2.44
FNDC11-204ENST00000615526 EIF4G1Q04637 1599 aaKnown RBP30.26■■■□□ 2.43
FNDC11-204ENST00000615526 ANP32CO43423 234 aa30.25■■■□□ 2.43
FNDC11-204ENST00000615526 EEA1Q15075 1411 aa30.21■■■□□ 2.43
FNDC11-204ENST00000615526 KANK4Q5T7N3 995 aaPredicted RBP30.2■■■□□ 2.42
FNDC11-204ENST00000615526 HNRNPUQ00839 825 aaKnown RBP eCLIP30.18■■■□□ 2.42
FNDC11-204ENST00000615526 SIN3AQ96ST3 1273 aa30.15■■■□□ 2.42
FNDC11-204ENST00000615526 MYT1LQ9UL68 1186 aa30.15■■■□□ 2.42
FNDC11-204ENST00000615526 ZBTB4Q9P1Z0 1013 aaPredicted RBP30.14■■■□□ 2.42
FNDC11-204ENST00000615526 BAZ1AQ9NRL2 1556 aaPredicted RBP30.1■■■□□ 2.41
FNDC11-204ENST00000615526 PAK3O75914 559 aaPredicted RBP30.09■■■□□ 2.41
FNDC11-204ENST00000615526 B4GALNT3Q6L9W6 998 aa30.07■■■□□ 2.4
FNDC11-204ENST00000615526 CEP164Q9UPV0 1460 aa30.06■■■□□ 2.4
FNDC11-204ENST00000615526 NOP58Q9Y2X3 529 aaKnown RBP30.05■■■□□ 2.4
FNDC11-204ENST00000615526 IL27Q8NEV9 243 aa30.04■■■□□ 2.4
FNDC11-204ENST00000615526 PPP1R15AO75807 674 aaPredicted RBP30.04■■■□□ 2.4
FNDC11-204ENST00000615526 RTL5Q5HYW3 569 aaPredicted RBP29.99■■■□□ 2.39
FNDC11-204ENST00000615526 CCER2I3L3R5 266 aa29.96■■■□□ 2.39
FNDC11-204ENST00000615526 RAPGEF2Q9Y4G8 1499 aa29.93■■■□□ 2.38
FNDC11-204ENST00000615526 NACADO15069 1562 aa29.89■■■□□ 2.38
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms