Protein–RNA interactions for Protein: O00339

MATN2, Matrilin-2, humanhuman

Predictions only

Length 956 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MATN2O00339 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC24.58■■□□□ 1.53
MATN2O00339 OVOL2-201ENST00000278780 1555 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.52
MATN2O00339 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC24.58■■□□□ 1.52
MATN2O00339 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC24.57■■□□□ 1.52
MATN2O00339 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC24.57■■□□□ 1.52
MATN2O00339 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC24.57■■□□□ 1.52
MATN2O00339 FAM120AOS-202ENST00000423591 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC24.56■■□□□ 1.52
MATN2O00339 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC24.56■■□□□ 1.52
MATN2O00339 P2RY2-202ENST00000393596 2174 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
MATN2O00339 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC24.56■■□□□ 1.52
MATN2O00339 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC24.55■■□□□ 1.52
MATN2O00339 RPS2-210ENST00000530225 765 ntTSL 2 BASIC24.55■■□□□ 1.52
MATN2O00339 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC24.55■■□□□ 1.52
MATN2O00339 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC24.54■■□□□ 1.52
MATN2O00339 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC24.54■■□□□ 1.52
MATN2O00339 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC24.54■■□□□ 1.52
MATN2O00339 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC24.54■■□□□ 1.52
MATN2O00339 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC24.54■■□□□ 1.52
MATN2O00339 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC24.54■■□□□ 1.52
MATN2O00339 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC24.54■■□□□ 1.52
MATN2O00339 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC24.54■■□□□ 1.52
MATN2O00339 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC24.54■■□□□ 1.52
MATN2O00339 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC24.54■■□□□ 1.52
MATN2O00339 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC24.54■■□□□ 1.52
MATN2O00339 TMEM150A-202ENST00000334462 1518 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
MATN2O00339 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC24.54■■□□□ 1.52
MATN2O00339 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC24.53■■□□□ 1.52
MATN2O00339 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC24.53■■□□□ 1.52
MATN2O00339 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC24.53■■□□□ 1.52
MATN2O00339 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC24.53■■□□□ 1.52
MATN2O00339 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC24.53■■□□□ 1.52
MATN2O00339 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC24.53■■□□□ 1.52
MATN2O00339 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC24.53■■□□□ 1.52
MATN2O00339 DCDC2C-201ENST00000399143 1476 ntAPPRIS P1 TSL 5 BASIC24.52■■□□□ 1.52
MATN2O00339 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC24.52■■□□□ 1.52
MATN2O00339 LAGE3-201ENST00000357360 949 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
MATN2O00339 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC24.52■■□□□ 1.52
MATN2O00339 PEX7-203ENST00000541292 945 ntTSL 5 BASIC24.52■■□□□ 1.52
MATN2O00339 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC24.52■■□□□ 1.52
MATN2O00339 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC24.52■■□□□ 1.52
MATN2O00339 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC24.52■■□□□ 1.52
MATN2O00339 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC24.52■■□□□ 1.52
MATN2O00339 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC24.51■■□□□ 1.51
MATN2O00339 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC24.51■■□□□ 1.51
MATN2O00339 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
MATN2O00339 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC24.5■■□□□ 1.51
MATN2O00339 SKOR2-203ENST00000620245 3048 ntAPPRIS ALT2 TSL 5 BASIC24.5■■□□□ 1.51
MATN2O00339 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC24.5■■□□□ 1.51
MATN2O00339 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC24.5■■□□□ 1.51
MATN2O00339 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC24.5■■□□□ 1.51
MATN2O00339 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
MATN2O00339 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC24.5■■□□□ 1.51
MATN2O00339 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
MATN2O00339 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC24.49■■□□□ 1.51
MATN2O00339 AC148477.6-201ENST00000623746 465 ntBASIC24.49■■□□□ 1.51
MATN2O00339 FEZ1-201ENST00000278919 1748 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
MATN2O00339 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC24.49■■□□□ 1.51
MATN2O00339 PAPD7-201ENST00000230859 5459 ntTSL 1 (best) BASIC24.48■■□□□ 1.51
MATN2O00339 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
MATN2O00339 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC24.47■■□□□ 1.51
MATN2O00339 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC24.47■■□□□ 1.51
MATN2O00339 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC24.47■■□□□ 1.51
MATN2O00339 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC24.47■■□□□ 1.51
MATN2O00339 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC24.47■■□□□ 1.51
MATN2O00339 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC24.47■■□□□ 1.51
MATN2O00339 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC24.46■■□□□ 1.51
MATN2O00339 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC24.46■■□□□ 1.51
MATN2O00339 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
MATN2O00339 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
MATN2O00339 SYT12-205ENST00000527043 1661 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
MATN2O00339 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.51
MATN2O00339 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
MATN2O00339 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC24.45■■□□□ 1.5
MATN2O00339 CHST11-203ENST00000547956 936 ntTSL 2 BASIC24.45■■□□□ 1.5
MATN2O00339 COPZ2-210ENST00000621465 895 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
MATN2O00339 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
MATN2O00339 AC145676.1-201ENST00000514988 2004 ntBASIC24.44■■□□□ 1.5
MATN2O00339 SRP68-213ENST00000629930 165 ntTSL 5 BASIC24.44■■□□□ 1.5
MATN2O00339 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC24.44■■□□□ 1.5
MATN2O00339 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
MATN2O00339 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC24.43■■□□□ 1.5
MATN2O00339 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC24.43■■□□□ 1.5
MATN2O00339 ARHGEF7-206ENST00000375741 5525 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
MATN2O00339 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
MATN2O00339 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
MATN2O00339 TPT1-202ENST00000379055 948 ntTSL 2 BASIC24.42■■□□□ 1.5
MATN2O00339 BOK-AS1-201ENST00000434306 643 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
MATN2O00339 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC24.42■■□□□ 1.5
MATN2O00339 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC24.42■■□□□ 1.5
MATN2O00339 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC24.41■■□□□ 1.5
MATN2O00339 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
MATN2O00339 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
MATN2O00339 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC24.41■■□□□ 1.5
MATN2O00339 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC24.41■■□□□ 1.5
MATN2O00339 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC24.41■■□□□ 1.5
MATN2O00339 LACTBL1-202ENST00000618559 1500 ntAPPRIS ALT2 TSL 5 BASIC24.4■■□□□ 1.5
MATN2O00339 C9orf50-201ENST00000372478 1620 ntAPPRIS P2 TSL 2 BASIC24.4■■□□□ 1.5
MATN2O00339 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC24.4■■□□□ 1.5
MATN2O00339 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
MATN2O00339 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC24.4■■□□□ 1.5
Retrieved 100 of 98,524 protein–RNA pairs in 42 ms