RNA–Protein interactions for RNA: ENST00000269886.7

SH3GL1-201, Transcript of SH3 domain containing GRB2 like 1, endophilin A2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SH3GL1, Length 2,516 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3GL1-201ENST00000269886 NISCHQ9Y2I1 1504 aa50.02■■■■■ 5.6
SH3GL1-201ENST00000269886 SHROOM4Q9ULL8 1493 aa42.7■■■■■ 4.43
SH3GL1-201ENST00000269886 CCDC180Q9P1Z9 1646 aa42.49■■■■■ 4.39
SH3GL1-201ENST00000269886 ZCCHC6Q5VYS8 1495 aaKnown RBP42.31■■■■■ 4.36
SH3GL1-201ENST00000269886 SUPT5HO00267 1087 aaKnown RBP41.87■■■■■ 4.29
SH3GL1-201ENST00000269886 DCAF8L2P0C7V8 631 aa41.54■■■■■ 4.24
SH3GL1-201ENST00000269886 DCAF1Q9Y4B6 1507 aa41.01■■■■■ 4.15
SH3GL1-201ENST00000269886 CHIC1Q5VXU3 224 aa40.69■■■■■ 4.1
SH3GL1-201ENST00000269886 MYO15BQ96JP2 1530 aa40.55■■■■■ 4.08
SH3GL1-201ENST00000269886 ABCC9O60706 1549 aa39.91■■■■□ 3.98
SH3GL1-201ENST00000269886 SCRIBQ14160 1630 aa39.88■■■■□ 3.98
SH3GL1-201ENST00000269886 RSF1Q96T23 1441 aaPredicted RBP39.6■■■■□ 3.93
SH3GL1-201ENST00000269886 LOC105371045A0A1W2PR82 267 aa39.52■■■■□ 3.92
SH3GL1-201ENST00000269886 PCGF6Q9BYE7 350 aa39.43■■■■□ 3.9
SH3GL1-201ENST00000269886 HRCP23327 699 aa39.4■■■■□ 3.9
SH3GL1-201ENST00000269886 NACADO15069 1562 aa39.37■■■■□ 3.89
SH3GL1-201ENST00000269886 RB1CC1Q8TDY2 1594 aa39.19■■■■□ 3.86
SH3GL1-201ENST00000269886 CECR2Q9BXF3 1484 aa39.06■■■■□ 3.84
SH3GL1-201ENST00000269886 TRIM41Q8WV44 630 aa38.98■■■■□ 3.83
SH3GL1-201ENST00000269886 MROH2BQ7Z745 1585 aa38.91■■■■□ 3.82
SH3GL1-201ENST00000269886 WIZO95785 1651 aa38.71■■■■□ 3.79
SH3GL1-201ENST00000269886 FAM9AQ8IZU1 332 aaPredicted RBP38.7■■■■□ 3.79
SH3GL1-201ENST00000269886 TRIM26Q12899 539 aaPredicted RBP38.66■■■■□ 3.78
SH3GL1-201ENST00000269886 PPARGC1BQ86YN6 1023 aaKnown RBP38.64■■■■□ 3.78
SH3GL1-201ENST00000269886 BAZ1AQ9NRL2 1556 aaPredicted RBP38.43■■■■□ 3.74
SH3GL1-201ENST00000269886 EHMT2Q96KQ7 1210 aa38.39■■■■□ 3.74
SH3GL1-201ENST00000269886 UNC13AQ9UPW8 1703 aa38.25■■■■□ 3.71
SH3GL1-201ENST00000269886 EIF4G1Q04637 1599 aaKnown RBP38.16■■■■□ 3.7
SH3GL1-201ENST00000269886 SMARCA4P51532 1647 aa38.09■■■■□ 3.69
SH3GL1-201ENST00000269886 TOP2AP11388 1531 aaKnown RBP38.06■■■■□ 3.68
SH3GL1-201ENST00000269886 CCDC88BA6NC98 1476 aa37.94■■■■□ 3.66
SH3GL1-201ENST00000269886 SMARCA2P51531 1590 aa37.88■■■■□ 3.65
SH3GL1-201ENST00000269886 ABCC8Q09428 1581 aa37.86■■■■□ 3.65
SH3GL1-201ENST00000269886 BICRAQ9NZM4 1560 aa37.84■■■■□ 3.65
SH3GL1-201ENST00000269886 ZEB1P37275 1124 aaPredicted RBP37.76■■■■□ 3.64
SH3GL1-201ENST00000269886 PABPN1Q86U42 306 aaKnown RBP eCLIP37.75■■■■□ 3.63
SH3GL1-201ENST00000269886 SOGA1O94964 1423 aa37.5■■■■□ 3.59
SH3GL1-201ENST00000269886 PEG3Q9GZU2 1588 aa37.35■■■■□ 3.57
SH3GL1-201ENST00000269886 RUSC2Q8N2Y8 1516 aa37.33■■■■□ 3.57
SH3GL1-201ENST00000269886 CEP162Q5TB80 1403 aa37.3■■■■□ 3.56
SH3GL1-201ENST00000269886 CSRNP3Q8WYN3 585 aa37.28■■■■□ 3.56
SH3GL1-201ENST00000269886 EEA1Q15075 1411 aa37.24■■■■□ 3.55
SH3GL1-201ENST00000269886 TNIKQ9UKE5 1360 aa37.23■■■■□ 3.55
SH3GL1-201ENST00000269886 WRNQ14191 1432 aaPredicted RBP eCLIP37.23■■■■□ 3.55
SH3GL1-201ENST00000269886 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP37.16■■■■□ 3.54
SH3GL1-201ENST00000269886 TTBK1Q5TCY1 1321 aaPredicted RBP37.15■■■■□ 3.54
SH3GL1-201ENST00000269886 UBTFP17480 764 aaKnown RBP37.14■■■■□ 3.54
SH3GL1-201ENST00000269886 ATAD2BQ9ULI0 1458 aa37.13■■■■□ 3.53
SH3GL1-201ENST00000269886 CCER1Q8TC90 406 aaPredicted RBP37.03■■■■□ 3.52
SH3GL1-201ENST00000269886 BAZ1BQ9UIG0 1483 aaKnown RBP37.03■■■■□ 3.52
SH3GL1-201ENST00000269886 SYNJ1O43426 1573 aa37.02■■■■□ 3.52
SH3GL1-201ENST00000269886 GOLGA3Q08378 1498 aa37.01■■■■□ 3.52
SH3GL1-201ENST00000269886 CEP164Q9UPV0 1460 aa36.8■■■■□ 3.48
SH3GL1-201ENST00000269886 KIF21BO75037 1637 aa36.75■■■■□ 3.47
SH3GL1-201ENST00000269886 CLIP1P30622 1438 aa36.61■■■■□ 3.45
SH3GL1-201ENST00000269886 RAPGEF2Q9Y4G8 1499 aa36.58■■■■□ 3.45
SH3GL1-201ENST00000269886 TOP2BQ02880 1626 aa36.54■■■■□ 3.44
SH3GL1-201ENST00000269886 RANGAP1P46060 587 aaPredicted RBP36.44■■■■□ 3.42
SH3GL1-201ENST00000269886 VPS8Q8N3P4 1428 aa36.44■■■■□ 3.42
SH3GL1-201ENST00000269886 BIVM-ERCC5R4GMW8 1640 aa36.4■■■■□ 3.42
SH3GL1-201ENST00000269886 NCAPD3P42695 1498 aa36.39■■■■□ 3.42
SH3GL1-201ENST00000269886 HMGXB3Q12766 1538 aa36.37■■■■□ 3.41
SH3GL1-201ENST00000269886 HNRNPUL2Q1KMD3 747 aaKnown RBP36.33■■■■□ 3.41
SH3GL1-201ENST00000269886 SCAF1Q9H7N4 1312 aaKnown RBP36.3■■■■□ 3.4
SH3GL1-201ENST00000269886 DIEXFQ68CQ4 756 aaKnown RBP36.29■■■■□ 3.4
SH3GL1-201ENST00000269886 APLP2Q06481 763 aa36.28■■■■□ 3.4
SH3GL1-201ENST00000269886 CUX1P39880 1505 aa36.22■■■■□ 3.39
SH3GL1-201ENST00000269886 PRXQ9BXM0 1461 aa36.2■■■■□ 3.39
SH3GL1-201ENST00000269886 ERICH3Q5RHP9 1530 aa36.16■■■■□ 3.38
SH3GL1-201ENST00000269886 CFTRP13569 1480 aa36.11■■■■□ 3.37
SH3GL1-201ENST00000269886 CC2D2AQ9P2K1 1620 aa36.04■■■■□ 3.36
SH3GL1-201ENST00000269886 KIF27Q86VH2 1401 aa36.04■■■■□ 3.36
SH3GL1-201ENST00000269886 ARAP1Q96P48 1450 aa36.03■■■■□ 3.36
SH3GL1-201ENST00000269886 ZNF316A6NFI3 1004 aaPredicted RBP36.02■■■■□ 3.36
SH3GL1-201ENST00000269886 ACIN1Q9UKV3 1341 aaKnown RBP35.96■■■■□ 3.35
SH3GL1-201ENST00000269886 NEUROD1Q13562 356 aa35.94■■■■□ 3.34
SH3GL1-201ENST00000269886 KANK4Q5T7N3 995 aaPredicted RBP35.88■■■■□ 3.33
SH3GL1-201ENST00000269886 PRDM2Q13029 1718 aa35.77■■■■□ 3.32
SH3GL1-201ENST00000269886 CENPBP07199 599 aaPredicted RBP35.73■■■■□ 3.31
SH3GL1-201ENST00000269886 ARHGAP35Q9NRY4 1499 aa35.73■■■■□ 3.31
SH3GL1-201ENST00000269886 CADPSQ9ULU8 1353 aa35.72■■■■□ 3.31
SH3GL1-201ENST00000269886 CUX2O14529 1486 aa35.71■■■■□ 3.31
SH3GL1-201ENST00000269886 IGF1RP08069 1367 aa35.67■■■■□ 3.3
SH3GL1-201ENST00000269886 DHX57Q6P158 1386 aaKnown RBP35.59■■■■□ 3.29
SH3GL1-201ENST00000269886 RRBP1Q9P2E9 1410 aaKnown RBP35.59■■■■□ 3.29
SH3GL1-201ENST00000269886 FGD5Q6ZNL6 1462 aa35.58■■■■□ 3.29
SH3GL1-201ENST00000269886 GTF3C3Q9Y5Q9 886 aa35.56■■■■□ 3.28
SH3GL1-201ENST00000269886 MIER1Q8N108 512 aa35.54■■■■□ 3.28
SH3GL1-201ENST00000269886 CARMIL1Q5VZK9 1371 aa35.51■■■■□ 3.28
SH3GL1-201ENST00000269886 CLSPNQ9HAW4 1339 aa35.5■■■■□ 3.27
SH3GL1-201ENST00000269886 CCNB3Q8WWL7 1395 aa35.46■■■■□ 3.27
SH3GL1-201ENST00000269886 YTHDC1Q96MU7 727 aaKnown RBP35.45■■■■□ 3.27
SH3GL1-201ENST00000269886 ITGAEP38570 1179 aa35.38■■■■□ 3.25
SH3GL1-201ENST00000269886 FANCD2Q9BXW9 1451 aa35.38■■■■□ 3.25
SH3GL1-201ENST00000269886 PELP1Q8IZL8 1130 aaKnown RBP35.36■■■■□ 3.25
SH3GL1-201ENST00000269886 TIAM1Q13009 1591 aa35.31■■■■□ 3.24
SH3GL1-201ENST00000269886 MAP3K1Q13233 1512 aa35.25■■■■□ 3.23
SH3GL1-201ENST00000269886 RAD54L2Q9Y4B4 1467 aa35.24■■■■□ 3.23
SH3GL1-201ENST00000269886 P3H3Q8IVL6 736 aa35.23■■■■□ 3.23
SH3GL1-201ENST00000269886 LRRC9Q6ZRR7 1453 aa35.2■■■■□ 3.23
Retrieved 100 of 20,778 RNA–protein pairs in 7.8 ms