RNA–Protein interactions for RNA: ENST00000345249.8

PPM1B-202, Transcript of protein phosphatase, Mg2+/Mn2+ dependent 1B, humanhuman

TSL 1 (best) BASIC

Gene PPM1B, Length 1,713 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPM1B-202ENST00000345249 NISCHQ9Y2I1 1504 aa53.01■■■■■ 6.08
PPM1B-202ENST00000345249 CCDC180Q9P1Z9 1646 aa45.75■■■■■ 4.91
PPM1B-202ENST00000345249 ZCCHC6Q5VYS8 1495 aaKnown RBP44.72■■■■■ 4.75
PPM1B-202ENST00000345249 DCAF1Q9Y4B6 1507 aa43.87■■■■■ 4.61
PPM1B-202ENST00000345249 SHROOM4Q9ULL8 1493 aa43.8■■■■■ 4.6
PPM1B-202ENST00000345249 DCAF8L2P0C7V8 631 aa43.39■■■■■ 4.54
PPM1B-202ENST00000345249 ABCC9O60706 1549 aa43.36■■■■■ 4.53
PPM1B-202ENST00000345249 MYO15BQ96JP2 1530 aa43.02■■■■■ 4.48
PPM1B-202ENST00000345249 SUPT5HO00267 1087 aaKnown RBP42.6■■■■■ 4.41
PPM1B-202ENST00000345249 NACADO15069 1562 aa42.43■■■■■ 4.38
PPM1B-202ENST00000345249 SCRIBQ14160 1630 aa42.18■■■■■ 4.34
PPM1B-202ENST00000345249 RB1CC1Q8TDY2 1594 aa41.82■■■■■ 4.28
PPM1B-202ENST00000345249 RSF1Q96T23 1441 aaPredicted RBP41.5■■■■■ 4.23
PPM1B-202ENST00000345249 CHIC1Q5VXU3 224 aa41.35■■■■■ 4.21
PPM1B-202ENST00000345249 CECR2Q9BXF3 1484 aa41.13■■■■■ 4.18
PPM1B-202ENST00000345249 UNC13AQ9UPW8 1703 aa41■■■■■ 4.15
PPM1B-202ENST00000345249 MROH2BQ7Z745 1585 aa40.99■■■■■ 4.15
PPM1B-202ENST00000345249 BAZ1AQ9NRL2 1556 aaPredicted RBP40.83■■■■■ 4.13
PPM1B-202ENST00000345249 WIZO95785 1651 aa40.67■■■■■ 4.1
PPM1B-202ENST00000345249 BICRAQ9NZM4 1560 aa40.62■■■■■ 4.09
PPM1B-202ENST00000345249 PABPN1Q86U42 306 aaKnown RBP eCLIP40.58■■■■■ 4.09
PPM1B-202ENST00000345249 SMARCA4P51532 1647 aa40.53■■■■■ 4.08
PPM1B-202ENST00000345249 TOP2AP11388 1531 aaKnown RBP40.29■■■■■ 4.04
PPM1B-202ENST00000345249 PEG3Q9GZU2 1588 aa40.05■■■■■ 4
PPM1B-202ENST00000345249 EIF4G1Q04637 1599 aaKnown RBP40.02■■■■■ 4
PPM1B-202ENST00000345249 TRIM41Q8WV44 630 aa40.02■■■■■ 4
PPM1B-202ENST00000345249 SMARCA2P51531 1590 aa39.95■■■■□ 3.99
PPM1B-202ENST00000345249 CCDC88BA6NC98 1476 aa39.93■■■■□ 3.98
PPM1B-202ENST00000345249 LOC105371045A0A1W2PR82 267 aa39.77■■■■□ 3.96
PPM1B-202ENST00000345249 ATAD2BQ9ULI0 1458 aa39.68■■■■□ 3.94
PPM1B-202ENST00000345249 DNAJC5BQ9UF47 199 aa39.68■■■■□ 3.94
PPM1B-202ENST00000345249 BAZ1BQ9UIG0 1483 aaKnown RBP39.46■■■■□ 3.91
PPM1B-202ENST00000345249 ABCC8Q09428 1581 aa39.32■■■■□ 3.88
PPM1B-202ENST00000345249 FAM9AQ8IZU1 332 aaPredicted RBP39.27■■■■□ 3.88
PPM1B-202ENST00000345249 NCAPD3P42695 1498 aa39.21■■■■□ 3.87
PPM1B-202ENST00000345249 CC2D2AQ9P2K1 1620 aa39.21■■■■□ 3.87
PPM1B-202ENST00000345249 HMGXB3Q12766 1538 aa39.18■■■■□ 3.86
PPM1B-202ENST00000345249 WRNQ14191 1432 aaPredicted RBP eCLIP38.99■■■■□ 3.83
PPM1B-202ENST00000345249 EEA1Q15075 1411 aa38.93■■■■□ 3.82
PPM1B-202ENST00000345249 PCGF6Q9BYE7 350 aa38.86■■■■□ 3.81
PPM1B-202ENST00000345249 SOGA1O94964 1423 aa38.81■■■■□ 3.8
PPM1B-202ENST00000345249 SYNJ1O43426 1573 aa38.79■■■■□ 3.8
PPM1B-202ENST00000345249 TRIM26Q12899 539 aaPredicted RBP38.69■■■■□ 3.78
PPM1B-202ENST00000345249 CSRNP3Q8WYN3 585 aa38.63■■■■□ 3.78
PPM1B-202ENST00000345249 EHMT2Q96KQ7 1210 aa38.63■■■■□ 3.77
PPM1B-202ENST00000345249 RUSC2Q8N2Y8 1516 aa38.62■■■■□ 3.77
PPM1B-202ENST00000345249 CFTRP13569 1480 aa38.58■■■■□ 3.77
PPM1B-202ENST00000345249 TOP2BQ02880 1626 aa38.57■■■■□ 3.76
PPM1B-202ENST00000345249 HRCP23327 699 aa38.54■■■■□ 3.76
PPM1B-202ENST00000345249 TNIKQ9UKE5 1360 aa38.51■■■■□ 3.76
PPM1B-202ENST00000345249 BIVM-ERCC5R4GMW8 1640 aa38.51■■■■□ 3.75
PPM1B-202ENST00000345249 GOLGA3Q08378 1498 aa38.4■■■■□ 3.74
PPM1B-202ENST00000345249 KIF21BO75037 1637 aa38.36■■■■□ 3.73
PPM1B-202ENST00000345249 PRDM2Q13029 1718 aa38.33■■■■□ 3.73
PPM1B-202ENST00000345249 CEP164Q9UPV0 1460 aa38.32■■■■□ 3.73
PPM1B-202ENST00000345249 CEP162Q5TB80 1403 aa38.32■■■■□ 3.72
PPM1B-202ENST00000345249 CUX1P39880 1505 aa38.27■■■■□ 3.72
PPM1B-202ENST00000345249 CADPSQ9ULU8 1353 aa38.25■■■■□ 3.71
PPM1B-202ENST00000345249 UBTFP17480 764 aaKnown RBP38.15■■■■□ 3.7
PPM1B-202ENST00000345249 RAPGEF2Q9Y4G8 1499 aa37.97■■■■□ 3.67
PPM1B-202ENST00000345249 PRXQ9BXM0 1461 aa37.95■■■■□ 3.67
PPM1B-202ENST00000345249 ERICH3Q5RHP9 1530 aa37.94■■■■□ 3.66
PPM1B-202ENST00000345249 KIF27Q86VH2 1401 aa37.92■■■■□ 3.66
PPM1B-202ENST00000345249 CLIP1P30622 1438 aa37.81■■■■□ 3.64
PPM1B-202ENST00000345249 FANCD2Q9BXW9 1451 aa37.8■■■■□ 3.64
PPM1B-202ENST00000345249 PPARGC1BQ86YN6 1023 aaKnown RBP37.75■■■■□ 3.63
PPM1B-202ENST00000345249 FGD5Q6ZNL6 1462 aa37.68■■■■□ 3.62
PPM1B-202ENST00000345249 LAMC3Q9Y6N6 1575 aa37.66■■■■□ 3.62
PPM1B-202ENST00000345249 VPS8Q8N3P4 1428 aa37.64■■■■□ 3.62
PPM1B-202ENST00000345249 NESP48681 1621 aa37.63■■■■□ 3.61
PPM1B-202ENST00000345249 DNMBPQ6XZF7 1577 aa37.62■■■■□ 3.61
PPM1B-202ENST00000345249 ZEB1P37275 1124 aaPredicted RBP37.61■■■■□ 3.61
PPM1B-202ENST00000345249 CUX2O14529 1486 aa37.61■■■■□ 3.61
PPM1B-202ENST00000345249 IGF1RP08069 1367 aa37.55■■■■□ 3.6
PPM1B-202ENST00000345249 TOPBP1Q92547 1522 aa37.5■■■■□ 3.59
PPM1B-202ENST00000345249 ABCA10Q8WWZ4 1543 aa37.41■■■■□ 3.58
PPM1B-202ENST00000345249 POLA1P09884 1462 aaPredicted RBP37.38■■■■□ 3.57
PPM1B-202ENST00000345249 ARAP1Q96P48 1450 aa37.37■■■■□ 3.57
PPM1B-202ENST00000345249 PDS5BQ9NTI5 1447 aa37.36■■■■□ 3.57
PPM1B-202ENST00000345249 CARMIL1Q5VZK9 1371 aa37.35■■■■□ 3.57
PPM1B-202ENST00000345249 URB2Q14146 1524 aaKnown RBP37.3■■■■□ 3.56
PPM1B-202ENST00000345249 RAD54L2Q9Y4B4 1467 aa37.27■■■■□ 3.56
PPM1B-202ENST00000345249 ERCC6Q03468 1493 aa37.26■■■■□ 3.56
PPM1B-202ENST00000345249 TTBK1Q5TCY1 1321 aaPredicted RBP37.21■■■■□ 3.55
PPM1B-202ENST00000345249 RANGAP1P46060 587 aaPredicted RBP37.2■■■■□ 3.55
PPM1B-202ENST00000345249 APLP2Q06481 763 aa37.2■■■■□ 3.55
PPM1B-202ENST00000345249 ARHGAP35Q9NRY4 1499 aa37.2■■■■□ 3.55
PPM1B-202ENST00000345249 WDR97A6NE52 1622 aa37.16■■■■□ 3.54
PPM1B-202ENST00000345249 KIF21AQ7Z4S6 1674 aa37.16■■■■□ 3.54
PPM1B-202ENST00000345249 CUL7Q14999 1698 aa37.1■■■■□ 3.53
PPM1B-202ENST00000345249 ABCA5Q8WWZ7 1642 aa37■■■■□ 3.51
PPM1B-202ENST00000345249 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP36.99■■■■□ 3.51
PPM1B-202ENST00000345249 THOC2Q8NI27 1593 aaKnown RBP36.95■■■■□ 3.51
PPM1B-202ENST00000345249 CCER1Q8TC90 406 aaPredicted RBP36.93■■■■□ 3.5
PPM1B-202ENST00000345249 MAP3K1Q13233 1512 aa36.87■■■■□ 3.49
PPM1B-202ENST00000345249 GAPVD1Q14C86 1478 aa36.87■■■■□ 3.49
PPM1B-202ENST00000345249 TARBP1Q13395 1621 aaKnown RBP36.87■■■■□ 3.49
PPM1B-202ENST00000345249 MRC2Q9UBG0 1479 aa36.83■■■■□ 3.49
PPM1B-202ENST00000345249 TDRD9Q8NDG6 1382 aaKnown RBP36.83■■■■□ 3.49
PPM1B-202ENST00000345249 KANK4Q5T7N3 995 aaPredicted RBP36.81■■■■□ 3.48
Retrieved 100 of 20,778 RNA–protein pairs in 80.7 ms