Protein–RNA interactions for Protein: Q7L0R7

RNF44, RING finger protein 44, humanhuman

Predictions only

Length 432 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF44Q7L0R7 SMARCD3-203ENST00000392811 2018 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
RNF44Q7L0R7 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC23.96■■□□□ 1.43
RNF44Q7L0R7 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC23.96■■□□□ 1.43
RNF44Q7L0R7 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC23.96■■□□□ 1.43
RNF44Q7L0R7 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
RNF44Q7L0R7 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
RNF44Q7L0R7 PIGX-201ENST00000296333 953 ntAPPRIS ALT2 TSL 2 BASIC23.96■■□□□ 1.43
RNF44Q7L0R7 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
RNF44Q7L0R7 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC23.96■■□□□ 1.43
RNF44Q7L0R7 GPR75-ASB3-201ENST00000406625 2113 ntAPPRIS P1 TSL 2 BASIC23.96■■□□□ 1.43
RNF44Q7L0R7 HOXD-AS2-201ENST00000426965 927 ntTSL 1 (best) BASIC23.95■■□□□ 1.42
RNF44Q7L0R7 ABHD17AP3-201ENST00000503096 1137 ntBASIC23.95■■□□□ 1.42
RNF44Q7L0R7 KCTD15-206ENST00000588881 1211 ntAPPRIS P1 TSL 2 BASIC23.95■■□□□ 1.42
RNF44Q7L0R7 TRADD-201ENST00000345057 1877 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
RNF44Q7L0R7 AC142086.6-201ENST00000621154 1765 ntBASIC23.95■■□□□ 1.42
RNF44Q7L0R7 MNX1-201ENST00000252971 2174 ntAPPRIS P3 TSL 1 (best) BASIC23.95■■□□□ 1.42
RNF44Q7L0R7 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC23.94■■□□□ 1.42
RNF44Q7L0R7 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC23.94■■□□□ 1.42
RNF44Q7L0R7 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC23.94■■□□□ 1.42
RNF44Q7L0R7 ST6GALNAC6-203ENST00000373142 2448 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
RNF44Q7L0R7 MAP4K3-211ENST00000484274 407 ntTSL 2 BASIC23.93■■□□□ 1.42
RNF44Q7L0R7 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC23.93■■□□□ 1.42
RNF44Q7L0R7 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
RNF44Q7L0R7 MTCH1-201ENST00000373616 2006 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
RNF44Q7L0R7 ITGA9-203ENST00000422441 2282 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
RNF44Q7L0R7 TMEM200C-201ENST00000383490 1920 ntAPPRIS P1 BASIC23.92■■□□□ 1.42
RNF44Q7L0R7 C17orf97-201ENST00000360127 1839 ntAPPRIS P2 TSL 1 (best) BASIC23.92■■□□□ 1.42
RNF44Q7L0R7 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC23.92■■□□□ 1.42
RNF44Q7L0R7 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC23.92■■□□□ 1.42
RNF44Q7L0R7 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC23.92■■□□□ 1.42
RNF44Q7L0R7 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC23.92■■□□□ 1.42
RNF44Q7L0R7 PQLC1-203ENST00000397778 2555 ntAPPRIS P3 TSL 1 (best) BASIC23.91■■□□□ 1.42
RNF44Q7L0R7 MED25-210ENST00000612854 801 ntTSL 5 BASIC23.91■■□□□ 1.42
RNF44Q7L0R7 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
RNF44Q7L0R7 MED25-214ENST00000622402 642 ntTSL 5 BASIC23.91■■□□□ 1.42
RNF44Q7L0R7 LINC01003-201ENST00000564834 1764 ntBASIC23.91■■□□□ 1.42
RNF44Q7L0R7 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
RNF44Q7L0R7 HSD17B1P1-201ENST00000590052 955 ntBASIC23.9■■□□□ 1.42
RNF44Q7L0R7 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC23.9■■□□□ 1.42
RNF44Q7L0R7 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC23.9■■□□□ 1.42
RNF44Q7L0R7 WTAP-206ENST00000621533 2109 ntAPPRIS P1 TSL 2 BASIC23.89■■□□□ 1.42
RNF44Q7L0R7 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC23.89■■□□□ 1.42
RNF44Q7L0R7 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC23.89■■□□□ 1.41
RNF44Q7L0R7 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
RNF44Q7L0R7 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
RNF44Q7L0R7 TSPOAP1-AS1-203ENST00000579527 2042 ntTSL 2 BASIC23.89■■□□□ 1.41
RNF44Q7L0R7 SERPING1-205ENST00000403558 2231 ntTSL 5 BASIC23.88■■□□□ 1.41
RNF44Q7L0R7 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC23.88■■□□□ 1.41
RNF44Q7L0R7 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
RNF44Q7L0R7 AC126177.7-201ENST00000547904 679 ntBASIC23.88■■□□□ 1.41
RNF44Q7L0R7 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC23.88■■□□□ 1.41
RNF44Q7L0R7 GPX1-201ENST00000419349 1106 ntBASIC23.87■■□□□ 1.41
RNF44Q7L0R7 CEP120-209ENST00000515110 606 ntTSL 3 BASIC23.87■■□□□ 1.41
RNF44Q7L0R7 AC060814.1-201ENST00000554326 538 ntBASIC23.87■■□□□ 1.41
RNF44Q7L0R7 SLC16A3-214ENST00000582743 2002 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
RNF44Q7L0R7 FZD2-201ENST00000315323 2112 ntAPPRIS P1 BASIC23.87■■□□□ 1.41
RNF44Q7L0R7 EVC-203ENST00000509451 1960 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
RNF44Q7L0R7 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC23.87■■□□□ 1.41
RNF44Q7L0R7 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
RNF44Q7L0R7 BMP7-204ENST00000450594 1857 ntTSL 2 BASIC23.86■■□□□ 1.41
RNF44Q7L0R7 TMEM114-202ENST00000568335 899 ntTSL 3 BASIC23.86■■□□□ 1.41
RNF44Q7L0R7 AC022413.1-201ENST00000624602 984 ntBASIC23.86■■□□□ 1.41
RNF44Q7L0R7 YBX2-201ENST00000007699 1590 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
RNF44Q7L0R7 EMID1-203ENST00000404820 2118 ntTSL 5 BASIC23.86■■□□□ 1.41
RNF44Q7L0R7 TMEM9-201ENST00000367330 1959 ntAPPRIS P3 TSL 1 (best) BASIC23.85■■□□□ 1.41
RNF44Q7L0R7 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
RNF44Q7L0R7 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
RNF44Q7L0R7 C1orf122-201ENST00000373042 973 ntAPPRIS P3 TSL 1 (best) BASIC23.85■■□□□ 1.41
RNF44Q7L0R7 BX255925.1-201ENST00000566954 1854 ntBASIC23.85■■□□□ 1.41
RNF44Q7L0R7 PXDC1-202ENST00000380283 2190 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
RNF44Q7L0R7 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC23.84■■□□□ 1.41
RNF44Q7L0R7 TBX2-AS1-202ENST00000589814 539 ntTSL 3 BASIC23.84■■□□□ 1.41
RNF44Q7L0R7 VEGFC-202ENST00000618562 2064 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
RNF44Q7L0R7 REXO4-201ENST00000371935 1899 ntTSL 3 BASIC23.83■■□□□ 1.41
RNF44Q7L0R7 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
RNF44Q7L0R7 IZUMO4-202ENST00000395301 1021 ntAPPRIS ALT2 TSL 1 (best) BASIC23.82■■□□□ 1.4
RNF44Q7L0R7 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
RNF44Q7L0R7 TTC39C-209ENST00000584250 1048 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
RNF44Q7L0R7 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC23.82■■□□□ 1.4
RNF44Q7L0R7 SHOX2-201ENST00000389589 2072 ntAPPRIS P3 TSL 1 (best) BASIC23.82■■□□□ 1.4
RNF44Q7L0R7 GPR137-202ENST00000377702 1478 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
RNF44Q7L0R7 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
RNF44Q7L0R7 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC23.81■■□□□ 1.4
RNF44Q7L0R7 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC23.81■■□□□ 1.4
RNF44Q7L0R7 AL359258.2-201ENST00000564063 1566 ntBASIC23.81■■□□□ 1.4
RNF44Q7L0R7 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
RNF44Q7L0R7 MAPKAPK2-201ENST00000294981 2171 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
RNF44Q7L0R7 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC23.8■■□□□ 1.4
RNF44Q7L0R7 HDHD5-202ENST00000336737 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC23.8■■□□□ 1.4
RNF44Q7L0R7 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC23.79■■□□□ 1.4
RNF44Q7L0R7 TCF24-201ENST00000563496 2450 ntAPPRIS P1 TSL 5 BASIC23.79■■□□□ 1.4
RNF44Q7L0R7 AP003068.2-202ENST00000526623 1662 ntTSL 2 BASIC23.79■■□□□ 1.4
RNF44Q7L0R7 HYAL2-202ENST00000395139 2136 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
RNF44Q7L0R7 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC23.78■■□□□ 1.4
RNF44Q7L0R7 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC23.78■■□□□ 1.4
RNF44Q7L0R7 WHAMMP3-201ENST00000611636 1609 ntBASIC23.77■■□□□ 1.4
RNF44Q7L0R7 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
RNF44Q7L0R7 MCCD1-201ENST00000376191 955 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
RNF44Q7L0R7 AC092296.2-201ENST00000589470 999 ntBASIC23.77■■□□□ 1.4
RNF44Q7L0R7 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC23.77■■□□□ 1.4
Retrieved 100 of 98,524 protein–RNA pairs in 33 ms