Protein–RNA interactions for Protein: Q3KNW1

SNAI3, Zinc finger protein SNAI3, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNAI3Q3KNW1 OTUD5-208ENST00000610466 2487 ntTSL 5 BASIC21.66■■□□□ 1.06
SNAI3Q3KNW1 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC21.66■■□□□ 1.06
SNAI3Q3KNW1 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC21.66■■□□□ 1.06
SNAI3Q3KNW1 CHST11-202ENST00000546689 756 ntTSL 2 BASIC21.66■■□□□ 1.06
SNAI3Q3KNW1 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC21.66■■□□□ 1.06
SNAI3Q3KNW1 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
SNAI3Q3KNW1 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
SNAI3Q3KNW1 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC21.65■■□□□ 1.06
SNAI3Q3KNW1 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC21.65■■□□□ 1.06
SNAI3Q3KNW1 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
SNAI3Q3KNW1 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
SNAI3Q3KNW1 ZNF276-202ENST00000443381 2267 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
SNAI3Q3KNW1 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC21.64■■□□□ 1.05
SNAI3Q3KNW1 PAPD7-201ENST00000230859 5459 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
SNAI3Q3KNW1 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC21.64■■□□□ 1.05
SNAI3Q3KNW1 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC21.63■■□□□ 1.05
SNAI3Q3KNW1 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
SNAI3Q3KNW1 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
SNAI3Q3KNW1 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
SNAI3Q3KNW1 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC21.62■■□□□ 1.05
SNAI3Q3KNW1 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC21.62■■□□□ 1.05
SNAI3Q3KNW1 G6PC3-201ENST00000269097 1533 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
SNAI3Q3KNW1 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC21.62■■□□□ 1.05
SNAI3Q3KNW1 RNF166-209ENST00000567844 633 ntTSL 5 BASIC21.62■■□□□ 1.05
SNAI3Q3KNW1 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC21.62■■□□□ 1.05
SNAI3Q3KNW1 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
SNAI3Q3KNW1 SPIRE1-202ENST00000409402 5665 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
SNAI3Q3KNW1 ARHGEF7-205ENST00000375739 5375 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
SNAI3Q3KNW1 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
SNAI3Q3KNW1 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC21.61■■□□□ 1.05
SNAI3Q3KNW1 AL449106.1-201ENST00000608517 1980 ntBASIC21.61■■□□□ 1.05
SNAI3Q3KNW1 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC21.61■■□□□ 1.05
SNAI3Q3KNW1 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
SNAI3Q3KNW1 RUNDC3A-201ENST00000225441 1821 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
SNAI3Q3KNW1 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC21.6■■□□□ 1.05
SNAI3Q3KNW1 SPATA33-209ENST00000579310 1490 ntAPPRIS ALT2 TSL 2 BASIC21.59■■□□□ 1.05
SNAI3Q3KNW1 ARTN-203ENST00000414809 1943 ntAPPRIS P4 TSL 3 BASIC21.59■■□□□ 1.05
SNAI3Q3KNW1 HES6-205ENST00000409356 528 ntTSL 2 BASIC21.59■■□□□ 1.05
SNAI3Q3KNW1 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
SNAI3Q3KNW1 AJAP1-201ENST00000378190 2383 ntAPPRIS P1 TSL 5 BASIC21.59■■□□□ 1.05
SNAI3Q3KNW1 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC21.59■■□□□ 1.05
SNAI3Q3KNW1 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
SNAI3Q3KNW1 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC21.58■■□□□ 1.04
SNAI3Q3KNW1 JAG2-201ENST00000331782 5835 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
SNAI3Q3KNW1 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
SNAI3Q3KNW1 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC21.57■■□□□ 1.04
SNAI3Q3KNW1 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC21.57■■□□□ 1.04
SNAI3Q3KNW1 CR559946.2-201ENST00000623684 991 ntBASIC21.57■■□□□ 1.04
SNAI3Q3KNW1 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
SNAI3Q3KNW1 LAGE3-201ENST00000357360 949 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
SNAI3Q3KNW1 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
SNAI3Q3KNW1 C9orf50-201ENST00000372478 1620 ntAPPRIS P2 TSL 2 BASIC21.55■■□□□ 1.04
SNAI3Q3KNW1 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
SNAI3Q3KNW1 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC21.55■■□□□ 1.04
SNAI3Q3KNW1 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
SNAI3Q3KNW1 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC21.55■■□□□ 1.04
SNAI3Q3KNW1 AGPS-202ENST00000409888 815 ntTSL 4 BASIC21.55■■□□□ 1.04
SNAI3Q3KNW1 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC21.55■■□□□ 1.04
SNAI3Q3KNW1 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
SNAI3Q3KNW1 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
SNAI3Q3KNW1 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
SNAI3Q3KNW1 AC008813.1-201ENST00000536597 885 ntBASIC21.54■■□□□ 1.04
SNAI3Q3KNW1 DHRS13-201ENST00000378895 1921 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
SNAI3Q3KNW1 WHAMMP3-201ENST00000611636 1609 ntBASIC21.54■■□□□ 1.04
SNAI3Q3KNW1 LACTBL1-202ENST00000618559 1500 ntAPPRIS ALT2 TSL 5 BASIC21.54■■□□□ 1.04
SNAI3Q3KNW1 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC21.54■■□□□ 1.04
SNAI3Q3KNW1 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
SNAI3Q3KNW1 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC21.53■■□□□ 1.04
SNAI3Q3KNW1 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
SNAI3Q3KNW1 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
SNAI3Q3KNW1 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC21.53■■□□□ 1.04
SNAI3Q3KNW1 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC21.52■■□□□ 1.04
SNAI3Q3KNW1 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
SNAI3Q3KNW1 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
SNAI3Q3KNW1 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
SNAI3Q3KNW1 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC21.52■■□□□ 1.04
SNAI3Q3KNW1 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
SNAI3Q3KNW1 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC21.52■■□□□ 1.04
SNAI3Q3KNW1 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC21.52■■□□□ 1.04
SNAI3Q3KNW1 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC21.52■■□□□ 1.03
SNAI3Q3KNW1 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC21.52■■□□□ 1.03
SNAI3Q3KNW1 RCAN1-201ENST00000313806 2490 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
SNAI3Q3KNW1 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
SNAI3Q3KNW1 HLA-V-202ENST00000446817 847 ntBASIC21.51■■□□□ 1.03
SNAI3Q3KNW1 AP004609.3-201ENST00000610705 1884 ntBASIC21.51■■□□□ 1.03
SNAI3Q3KNW1 MIR219A2-201ENST00000608502 1504 ntBASIC21.5■■□□□ 1.03
SNAI3Q3KNW1 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC21.5■■□□□ 1.03
SNAI3Q3KNW1 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC21.5■■□□□ 1.03
SNAI3Q3KNW1 GDI1-215ENST00000630693 786 ntTSL 4 BASIC21.5■■□□□ 1.03
SNAI3Q3KNW1 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
SNAI3Q3KNW1 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC21.5■■□□□ 1.03
SNAI3Q3KNW1 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
SNAI3Q3KNW1 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC21.5■■□□□ 1.03
SNAI3Q3KNW1 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC21.49■■□□□ 1.03
SNAI3Q3KNW1 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
SNAI3Q3KNW1 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC21.49■■□□□ 1.03
SNAI3Q3KNW1 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC21.49■■□□□ 1.03
SNAI3Q3KNW1 MIR3648-2-201ENST00000581792 180 ntBASIC21.49■■□□□ 1.03
SNAI3Q3KNW1 MIR3648-1-201ENST00000615959 180 ntBASIC21.49■■□□□ 1.03
SNAI3Q3KNW1 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 31 ms