Protein–RNA interactions for Protein: P19438

TNFRSF1A, Tumor necrosis factor receptor superfamily member 1A, humanhuman

Predictions only

Length 455 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1AP19438 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC21.18■□□□□ 0.98
TNFRSF1AP19438 PLSCR3-209ENST00000574401 2032 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
TNFRSF1AP19438 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
TNFRSF1AP19438 ABHD17AP3-201ENST00000503096 1137 ntBASIC21.17■□□□□ 0.98
TNFRSF1AP19438 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
TNFRSF1AP19438 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC21.17■□□□□ 0.98
TNFRSF1AP19438 AC142086.6-201ENST00000621154 1765 ntBASIC21.16■□□□□ 0.98
TNFRSF1AP19438 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
TNFRSF1AP19438 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
TNFRSF1AP19438 PIGX-201ENST00000296333 953 ntAPPRIS ALT2 TSL 2 BASIC21.16■□□□□ 0.98
TNFRSF1AP19438 ZFPM1-201ENST00000319555 5380 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
TNFRSF1AP19438 WSB2-201ENST00000315436 2646 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
TNFRSF1AP19438 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
TNFRSF1AP19438 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
TNFRSF1AP19438 CEP120-209ENST00000515110 606 ntTSL 3 BASIC21.15■□□□□ 0.98
TNFRSF1AP19438 C17orf97-201ENST00000360127 1839 ntAPPRIS P2 TSL 1 (best) BASIC21.15■□□□□ 0.98
TNFRSF1AP19438 RAPGEF1-203ENST00000372195 6256 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
TNFRSF1AP19438 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC21.14■□□□□ 0.98
TNFRSF1AP19438 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC21.14■□□□□ 0.98
TNFRSF1AP19438 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
TNFRSF1AP19438 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
TNFRSF1AP19438 C1orf122-201ENST00000373042 973 ntAPPRIS P3 TSL 1 (best) BASIC21.14■□□□□ 0.97
TNFRSF1AP19438 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC21.14■□□□□ 0.97
TNFRSF1AP19438 GPR75-ASB3-201ENST00000406625 2113 ntAPPRIS P1 TSL 2 BASIC21.14■□□□□ 0.97
TNFRSF1AP19438 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
TNFRSF1AP19438 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
TNFRSF1AP19438 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC21.13■□□□□ 0.97
TNFRSF1AP19438 SMARCD3-203ENST00000392811 2018 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
TNFRSF1AP19438 AC022413.1-201ENST00000624602 984 ntBASIC21.13■□□□□ 0.97
TNFRSF1AP19438 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC21.13■□□□□ 0.97
TNFRSF1AP19438 SERPING1-205ENST00000403558 2231 ntTSL 5 BASIC21.12■□□□□ 0.97
TNFRSF1AP19438 SHF-206ENST00000560471 2499 ntTSL 5 BASIC21.12■□□□□ 0.97
TNFRSF1AP19438 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC21.12■□□□□ 0.97
TNFRSF1AP19438 HES4-202ENST00000428771 1040 ntTSL 2 BASIC21.12■□□□□ 0.97
TNFRSF1AP19438 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC21.12■□□□□ 0.97
TNFRSF1AP19438 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC21.12■□□□□ 0.97
TNFRSF1AP19438 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC21.12■□□□□ 0.97
TNFRSF1AP19438 FAM117A-201ENST00000240364 2365 ntAPPRIS P2 TSL 1 (best) BASIC21.12■□□□□ 0.97
TNFRSF1AP19438 LINC01003-201ENST00000564834 1764 ntBASIC21.12■□□□□ 0.97
TNFRSF1AP19438 GPR137-202ENST00000377702 1478 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
TNFRSF1AP19438 TMEM200C-201ENST00000383490 1920 ntAPPRIS P1 BASIC21.12■□□□□ 0.97
TNFRSF1AP19438 MNX1-201ENST00000252971 2174 ntAPPRIS P3 TSL 1 (best) BASIC21.12■□□□□ 0.97
TNFRSF1AP19438 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC21.11■□□□□ 0.97
TNFRSF1AP19438 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
TNFRSF1AP19438 GPX1-201ENST00000419349 1106 ntBASIC21.11■□□□□ 0.97
TNFRSF1AP19438 MTCH1-201ENST00000373616 2006 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
TNFRSF1AP19438 ST6GALNAC6-203ENST00000373142 2448 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
TNFRSF1AP19438 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
TNFRSF1AP19438 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
TNFRSF1AP19438 BMP7-204ENST00000450594 1857 ntTSL 2 BASIC21.1■□□□□ 0.97
TNFRSF1AP19438 HOXD-AS2-201ENST00000426965 927 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
TNFRSF1AP19438 MAP4K3-211ENST00000484274 407 ntTSL 2 BASIC21.1■□□□□ 0.97
TNFRSF1AP19438 TBX2-AS1-202ENST00000589814 539 ntTSL 3 BASIC21.1■□□□□ 0.97
TNFRSF1AP19438 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
TNFRSF1AP19438 ITGA9-203ENST00000422441 2282 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
TNFRSF1AP19438 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC21.09■□□□□ 0.97
TNFRSF1AP19438 SLC16A3-214ENST00000582743 2002 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
TNFRSF1AP19438 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC21.08■□□□□ 0.97
TNFRSF1AP19438 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC21.08■□□□□ 0.97
TNFRSF1AP19438 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC21.08■□□□□ 0.97
TNFRSF1AP19438 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC21.08■□□□□ 0.97
TNFRSF1AP19438 BX255925.1-201ENST00000566954 1854 ntBASIC21.08■□□□□ 0.97
TNFRSF1AP19438 HSD17B1P1-201ENST00000590052 955 ntBASIC21.08■□□□□ 0.97
TNFRSF1AP19438 TSPOAP1-AS1-203ENST00000579527 2042 ntTSL 2 BASIC21.07■□□□□ 0.96
TNFRSF1AP19438 AL359258.2-201ENST00000564063 1566 ntBASIC21.07■□□□□ 0.96
TNFRSF1AP19438 IZUMO4-202ENST00000395301 1021 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
TNFRSF1AP19438 WTAP-206ENST00000621533 2109 ntAPPRIS P1 TSL 2 BASIC21.07■□□□□ 0.96
TNFRSF1AP19438 AC060814.1-201ENST00000554326 538 ntBASIC21.06■□□□□ 0.96
TNFRSF1AP19438 SHOX2-201ENST00000389589 2072 ntAPPRIS P3 TSL 1 (best) BASIC21.06■□□□□ 0.96
TNFRSF1AP19438 YBX2-201ENST00000007699 1590 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
TNFRSF1AP19438 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
TNFRSF1AP19438 PQLC1-203ENST00000397778 2555 ntAPPRIS P3 TSL 1 (best) BASIC21.05■□□□□ 0.96
TNFRSF1AP19438 EVC-203ENST00000509451 1960 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
TNFRSF1AP19438 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC21.04■□□□□ 0.96
TNFRSF1AP19438 FZD2-201ENST00000315323 2112 ntAPPRIS P1 BASIC21.04■□□□□ 0.96
TNFRSF1AP19438 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
TNFRSF1AP19438 AP003068.2-202ENST00000526623 1662 ntTSL 2 BASIC21.04■□□□□ 0.96
TNFRSF1AP19438 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC21.04■□□□□ 0.96
TNFRSF1AP19438 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC21.03■□□□□ 0.96
TNFRSF1AP19438 MED25-210ENST00000612854 801 ntTSL 5 BASIC21.03■□□□□ 0.96
TNFRSF1AP19438 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
TNFRSF1AP19438 MED25-214ENST00000622402 642 ntTSL 5 BASIC21.03■□□□□ 0.96
TNFRSF1AP19438 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
TNFRSF1AP19438 MFSD12-201ENST00000355415 2124 ntAPPRIS P3 TSL 1 (best) BASIC21.02■□□□□ 0.96
TNFRSF1AP19438 EMID1-203ENST00000404820 2118 ntTSL 5 BASIC21.02■□□□□ 0.96
TNFRSF1AP19438 ZNF639-209ENST00000496856 2033 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
TNFRSF1AP19438 MCCD1-201ENST00000376191 955 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
TNFRSF1AP19438 WHAMMP3-201ENST00000611636 1609 ntBASIC21.02■□□□□ 0.96
TNFRSF1AP19438 VEGFC-202ENST00000618562 2064 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
TNFRSF1AP19438 REXO4-201ENST00000371935 1899 ntTSL 3 BASIC21.01■□□□□ 0.95
TNFRSF1AP19438 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
TNFRSF1AP19438 HDHD5-202ENST00000336737 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
TNFRSF1AP19438 TMEM114-202ENST00000568335 899 ntTSL 3 BASIC21.01■□□□□ 0.95
TNFRSF1AP19438 RNF126P1-201ENST00000567452 1320 ntBASIC21.01■□□□□ 0.95
TNFRSF1AP19438 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
TNFRSF1AP19438 MAPKAPK2-201ENST00000294981 2171 ntTSL 1 (best) BASIC21■□□□□ 0.95
TNFRSF1AP19438 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
TNFRSF1AP19438 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC21■□□□□ 0.95
TNFRSF1AP19438 TMEM9-201ENST00000367330 1959 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
TNFRSF1AP19438 PXDC1-202ENST00000380283 2190 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 11.8 ms