Protein–RNA interactions for Protein: O14788

TNFSF11, Tumor necrosis factor ligand superfamily member 11, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF11O14788 TRADD-201ENST00000345057 1877 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
TNFSF11O14788 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
TNFSF11O14788 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC22.5■■□□□ 1.19
TNFSF11O14788 TMEM200C-201ENST00000383490 1920 ntAPPRIS P1 BASIC22.5■■□□□ 1.19
TNFSF11O14788 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
TNFSF11O14788 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC22.5■■□□□ 1.19
TNFSF11O14788 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC22.5■■□□□ 1.19
TNFSF11O14788 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC22.49■■□□□ 1.19
TNFSF11O14788 LINC01003-201ENST00000564834 1764 ntBASIC22.48■■□□□ 1.19
TNFSF11O14788 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
TNFSF11O14788 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC22.48■■□□□ 1.19
TNFSF11O14788 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
TNFSF11O14788 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
TNFSF11O14788 MRPL51-201ENST00000229238 1234 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
TNFSF11O14788 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC22.47■■□□□ 1.19
TNFSF11O14788 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC22.47■■□□□ 1.19
TNFSF11O14788 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC22.46■■□□□ 1.19
TNFSF11O14788 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
TNFSF11O14788 KCTD15-206ENST00000588881 1211 ntAPPRIS P1 TSL 2 BASIC22.46■■□□□ 1.19
TNFSF11O14788 TMEM9-201ENST00000367330 1959 ntAPPRIS P3 TSL 1 (best) BASIC22.46■■□□□ 1.19
TNFSF11O14788 EFEMP2-201ENST00000307998 2034 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
TNFSF11O14788 ZBTB10-204ENST00000455036 5458 ntAPPRIS P3 TSL 2 BASIC22.46■■□□□ 1.19
TNFSF11O14788 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC22.46■■□□□ 1.19
TNFSF11O14788 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC22.46■■□□□ 1.19
TNFSF11O14788 HYAL2-202ENST00000395139 2136 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
TNFSF11O14788 ABHD17AP3-201ENST00000503096 1137 ntBASIC22.45■■□□□ 1.18
TNFSF11O14788 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
TNFSF11O14788 MAPKAPK2-201ENST00000294981 2171 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
TNFSF11O14788 CEP120-209ENST00000515110 606 ntTSL 3 BASIC22.44■■□□□ 1.18
TNFSF11O14788 ANKRD65-205ENST00000537107 2190 ntAPPRIS P1 TSL 5 BASIC22.44■■□□□ 1.18
TNFSF11O14788 VEGFC-202ENST00000618562 2064 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
TNFSF11O14788 REXO4-201ENST00000371935 1899 ntTSL 3 BASIC22.43■■□□□ 1.18
TNFSF11O14788 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
TNFSF11O14788 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
TNFSF11O14788 HOXD-AS2-201ENST00000426965 927 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
TNFSF11O14788 BX255925.1-201ENST00000566954 1854 ntBASIC22.43■■□□□ 1.18
TNFSF11O14788 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC22.43■■□□□ 1.18
TNFSF11O14788 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC22.42■■□□□ 1.18
TNFSF11O14788 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
TNFSF11O14788 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC22.42■■□□□ 1.18
TNFSF11O14788 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC22.42■■□□□ 1.18
TNFSF11O14788 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
TNFSF11O14788 ZNF639-209ENST00000496856 2033 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
TNFSF11O14788 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
TNFSF11O14788 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC22.41■■□□□ 1.18
TNFSF11O14788 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC22.41■■□□□ 1.18
TNFSF11O14788 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC22.4■■□□□ 1.18
TNFSF11O14788 MFSD12-201ENST00000355415 2124 ntAPPRIS P3 TSL 1 (best) BASIC22.4■■□□□ 1.18
TNFSF11O14788 SHOX2-201ENST00000389589 2072 ntAPPRIS P3 TSL 1 (best) BASIC22.4■■□□□ 1.18
TNFSF11O14788 RAB40C-201ENST00000248139 2699 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
TNFSF11O14788 PIGX-201ENST00000296333 953 ntAPPRIS ALT2 TSL 2 BASIC22.4■■□□□ 1.18
TNFSF11O14788 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
TNFSF11O14788 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC22.4■■□□□ 1.18
TNFSF11O14788 MED25-210ENST00000612854 801 ntTSL 5 BASIC22.4■■□□□ 1.18
TNFSF11O14788 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
TNFSF11O14788 MED25-214ENST00000622402 642 ntTSL 5 BASIC22.4■■□□□ 1.18
TNFSF11O14788 AC022413.1-201ENST00000624602 984 ntBASIC22.4■■□□□ 1.18
TNFSF11O14788 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC22.39■■□□□ 1.17
TNFSF11O14788 MAP4K3-211ENST00000484274 407 ntTSL 2 BASIC22.39■■□□□ 1.17
TNFSF11O14788 AC126177.7-201ENST00000547904 679 ntBASIC22.39■■□□□ 1.17
TNFSF11O14788 TBX2-AS1-202ENST00000589814 539 ntTSL 3 BASIC22.39■■□□□ 1.17
TNFSF11O14788 HDHD5-202ENST00000336737 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC22.39■■□□□ 1.17
TNFSF11O14788 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC22.39■■□□□ 1.17
TNFSF11O14788 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC22.39■■□□□ 1.17
TNFSF11O14788 YBX2-201ENST00000007699 1590 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
TNFSF11O14788 GPX1-201ENST00000419349 1106 ntBASIC22.38■■□□□ 1.17
TNFSF11O14788 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC22.37■■□□□ 1.17
TNFSF11O14788 HSD17B1P1-201ENST00000590052 955 ntBASIC22.37■■□□□ 1.17
TNFSF11O14788 AL359258.2-201ENST00000564063 1566 ntBASIC22.37■■□□□ 1.17
TNFSF11O14788 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
TNFSF11O14788 SCCPDH-201ENST00000366510 2503 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
TNFSF11O14788 FAAH-201ENST00000243167 2094 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
TNFSF11O14788 C1orf122-201ENST00000373042 973 ntAPPRIS P3 TSL 1 (best) BASIC22.36■■□□□ 1.17
TNFSF11O14788 IZUMO4-202ENST00000395301 1021 ntAPPRIS ALT2 TSL 1 (best) BASIC22.36■■□□□ 1.17
TNFSF11O14788 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC22.36■■□□□ 1.17
TNFSF11O14788 PLEKHF1-201ENST00000436066 2084 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
TNFSF11O14788 AC060814.1-201ENST00000554326 538 ntBASIC22.35■■□□□ 1.17
TNFSF11O14788 ZNF775-201ENST00000329630 2257 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
TNFSF11O14788 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC22.34■■□□□ 1.17
TNFSF11O14788 TMEM114-202ENST00000568335 899 ntTSL 3 BASIC22.34■■□□□ 1.17
TNFSF11O14788 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
TNFSF11O14788 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
TNFSF11O14788 AP003068.2-202ENST00000526623 1662 ntTSL 2 BASIC22.33■■□□□ 1.17
TNFSF11O14788 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC22.33■■□□□ 1.17
TNFSF11O14788 TTC39C-209ENST00000584250 1048 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
TNFSF11O14788 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC22.33■■□□□ 1.17
TNFSF11O14788 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC22.33■■□□□ 1.16
TNFSF11O14788 MAGI2-211ENST00000535697 6146 ntTSL 5 BASIC22.33■■□□□ 1.16
TNFSF11O14788 WHAMMP3-201ENST00000611636 1609 ntBASIC22.32■■□□□ 1.16
TNFSF11O14788 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC22.32■■□□□ 1.16
TNFSF11O14788 FOXG1-201ENST00000313071 4890 ntAPPRIS P1 BASIC22.31■■□□□ 1.16
TNFSF11O14788 GABRA5-203ENST00000400081 2761 ntAPPRIS P1 TSL 5 BASIC22.31■■□□□ 1.16
TNFSF11O14788 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC22.31■■□□□ 1.16
TNFSF11O14788 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
TNFSF11O14788 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC22.31■■□□□ 1.16
TNFSF11O14788 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC22.31■■□□□ 1.16
TNFSF11O14788 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC22.31■■□□□ 1.16
TNFSF11O14788 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
TNFSF11O14788 GPR137-202ENST00000377702 1478 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
TNFSF11O14788 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
Retrieved 100 of 98,524 protein–RNA pairs in 75.8 ms