Protein–RNA interactions for Protein: O14493

CLDN4, Claudin-4, humanhuman

Predictions only

Length 209 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN4O14493 TPT1-202ENST00000379055 948 ntTSL 2 BASIC23.54■■□□□ 1.36
CLDN4O14493 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC23.54■■□□□ 1.36
CLDN4O14493 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC23.54■■□□□ 1.36
CLDN4O14493 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC23.54■■□□□ 1.36
CLDN4O14493 TMEM9-201ENST00000367330 1959 ntAPPRIS P3 TSL 1 (best) BASIC23.54■■□□□ 1.36
CLDN4O14493 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC23.53■■□□□ 1.36
CLDN4O14493 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
CLDN4O14493 KCTD15-206ENST00000588881 1211 ntAPPRIS P1 TSL 2 BASIC23.53■■□□□ 1.36
CLDN4O14493 AP003068.2-202ENST00000526623 1662 ntTSL 2 BASIC23.53■■□□□ 1.36
CLDN4O14493 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC23.53■■□□□ 1.36
CLDN4O14493 WTAP-206ENST00000621533 2109 ntAPPRIS P1 TSL 2 BASIC23.53■■□□□ 1.36
CLDN4O14493 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
CLDN4O14493 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
CLDN4O14493 EVC-203ENST00000509451 1960 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
CLDN4O14493 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC23.52■■□□□ 1.36
CLDN4O14493 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC23.52■■□□□ 1.36
CLDN4O14493 SHOX2-201ENST00000389589 2072 ntAPPRIS P3 TSL 1 (best) BASIC23.52■■□□□ 1.35
CLDN4O14493 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC23.51■■□□□ 1.35
CLDN4O14493 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
CLDN4O14493 TCF24-201ENST00000563496 2450 ntAPPRIS P1 TSL 5 BASIC23.5■■□□□ 1.35
CLDN4O14493 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC23.5■■□□□ 1.35
CLDN4O14493 AC126177.7-201ENST00000547904 679 ntBASIC23.5■■□□□ 1.35
CLDN4O14493 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC23.5■■□□□ 1.35
CLDN4O14493 MAPKAPK2-201ENST00000294981 2171 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
CLDN4O14493 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC23.49■■□□□ 1.35
CLDN4O14493 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC23.49■■□□□ 1.35
CLDN4O14493 ATOH7-201ENST00000373673 1480 ntAPPRIS P1 BASIC23.49■■□□□ 1.35
CLDN4O14493 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC23.49■■□□□ 1.35
CLDN4O14493 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC23.49■■□□□ 1.35
CLDN4O14493 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC23.49■■□□□ 1.35
CLDN4O14493 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC23.48■■□□□ 1.35
CLDN4O14493 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC23.48■■□□□ 1.35
CLDN4O14493 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC23.48■■□□□ 1.35
CLDN4O14493 SRP68-213ENST00000629930 165 ntTSL 5 BASIC23.48■■□□□ 1.35
CLDN4O14493 HDHD5-202ENST00000336737 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC23.47■■□□□ 1.35
CLDN4O14493 ZNF639-209ENST00000496856 2033 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
CLDN4O14493 MFSD12-201ENST00000355415 2124 ntAPPRIS P3 TSL 1 (best) BASIC23.47■■□□□ 1.35
CLDN4O14493 HYAL2-202ENST00000395139 2136 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
CLDN4O14493 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC23.47■■□□□ 1.35
CLDN4O14493 REXO4-201ENST00000371935 1899 ntTSL 3 BASIC23.47■■□□□ 1.35
CLDN4O14493 VEGFC-202ENST00000618562 2064 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
CLDN4O14493 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC23.46■■□□□ 1.35
CLDN4O14493 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC23.46■■□□□ 1.35
CLDN4O14493 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC23.46■■□□□ 1.35
CLDN4O14493 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC23.45■■□□□ 1.34
CLDN4O14493 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC23.45■■□□□ 1.34
CLDN4O14493 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.34
CLDN4O14493 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC23.45■■□□□ 1.34
CLDN4O14493 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC23.44■■□□□ 1.34
CLDN4O14493 EFEMP2-201ENST00000307998 2034 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
CLDN4O14493 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC23.44■■□□□ 1.34
CLDN4O14493 PCYT2-203ENST00000538936 5147 ntTSL 1 (best) BASIC23.44■■□□□ 1.34
CLDN4O14493 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC23.43■■□□□ 1.34
CLDN4O14493 RAPGEF1-203ENST00000372195 6256 ntTSL 1 (best) BASIC23.43■■□□□ 1.34
CLDN4O14493 ANKRD65-205ENST00000537107 2190 ntAPPRIS P1 TSL 5 BASIC23.43■■□□□ 1.34
CLDN4O14493 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC23.42■■□□□ 1.34
CLDN4O14493 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC23.42■■□□□ 1.34
CLDN4O14493 MRPL51-201ENST00000229238 1234 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
CLDN4O14493 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC23.41■■□□□ 1.34
CLDN4O14493 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC23.41■■□□□ 1.34
CLDN4O14493 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC23.41■■□□□ 1.34
CLDN4O14493 FAAH-201ENST00000243167 2094 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
CLDN4O14493 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC23.4■■□□□ 1.34
CLDN4O14493 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC23.4■■□□□ 1.34
CLDN4O14493 HOXD-AS2-201ENST00000426965 927 ntTSL 1 (best) BASIC23.4■■□□□ 1.34
CLDN4O14493 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC23.4■■□□□ 1.34
CLDN4O14493 CEP120-209ENST00000515110 606 ntTSL 3 BASIC23.4■■□□□ 1.34
CLDN4O14493 AC022413.1-201ENST00000624602 984 ntBASIC23.4■■□□□ 1.34
CLDN4O14493 GPR137-202ENST00000377702 1478 ntTSL 1 (best) BASIC23.4■■□□□ 1.34
CLDN4O14493 CDH24-206ENST00000610348 2037 ntTSL 1 (best) BASIC23.4■■□□□ 1.34
CLDN4O14493 AL359258.2-201ENST00000564063 1566 ntBASIC23.4■■□□□ 1.34
CLDN4O14493 SHF-208ENST00000560734 1731 ntTSL 3 BASIC23.39■■□□□ 1.34
CLDN4O14493 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.33
CLDN4O14493 MAP4K3-211ENST00000484274 407 ntTSL 2 BASIC23.39■■□□□ 1.33
CLDN4O14493 ABHD17AP3-201ENST00000503096 1137 ntBASIC23.39■■□□□ 1.33
CLDN4O14493 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.33
CLDN4O14493 WHAMMP3-201ENST00000611636 1609 ntBASIC23.39■■□□□ 1.33
CLDN4O14493 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC23.39■■□□□ 1.33
CLDN4O14493 YBX2-201ENST00000007699 1590 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.33
CLDN4O14493 PIGX-201ENST00000296333 953 ntAPPRIS ALT2 TSL 2 BASIC23.38■■□□□ 1.33
CLDN4O14493 C1orf122-201ENST00000373042 973 ntAPPRIS P3 TSL 1 (best) BASIC23.38■■□□□ 1.33
CLDN4O14493 TBX2-AS1-202ENST00000589814 539 ntTSL 3 BASIC23.38■■□□□ 1.33
CLDN4O14493 CAPNS1-204ENST00000587718 1558 ntAPPRIS ALT2 TSL 1 (best) BASIC23.38■■□□□ 1.33
CLDN4O14493 PLEKHF1-201ENST00000436066 2084 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
CLDN4O14493 PLSCR3-202ENST00000535512 2067 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
CLDN4O14493 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC23.37■■□□□ 1.33
CLDN4O14493 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC23.37■■□□□ 1.33
CLDN4O14493 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC23.37■■□□□ 1.33
CLDN4O14493 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC23.37■■□□□ 1.33
CLDN4O14493 IZUMO4-202ENST00000395301 1021 ntAPPRIS ALT2 TSL 1 (best) BASIC23.36■■□□□ 1.33
CLDN4O14493 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC23.35■■□□□ 1.33
CLDN4O14493 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
CLDN4O14493 MED25-210ENST00000612854 801 ntTSL 5 BASIC23.35■■□□□ 1.33
CLDN4O14493 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
CLDN4O14493 MED25-214ENST00000622402 642 ntTSL 5 BASIC23.35■■□□□ 1.33
CLDN4O14493 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC23.35■■□□□ 1.33
CLDN4O14493 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC23.35■■□□□ 1.33
CLDN4O14493 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
CLDN4O14493 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC23.34■■□□□ 1.33
CLDN4O14493 GPX1-201ENST00000419349 1106 ntBASIC23.34■■□□□ 1.33
Retrieved 100 of 98,524 protein–RNA pairs in 35 ms