Protein–RNA interactions for Protein: Q9H8M2

BRD9, Bromodomain-containing protein 9, humanhuman

Predictions only

Length 597 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRD9Q9H8M2 CIB2-201ENST00000258930 1598 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
BRD9Q9H8M2 TMEM150A-202ENST00000334462 1518 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
BRD9Q9H8M2 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC26.18■■□□□ 1.78
BRD9Q9H8M2 GFER-205ENST00000569451 517 ntTSL 5 BASIC26.18■■□□□ 1.78
BRD9Q9H8M2 ATP5G2P3-201ENST00000429083 425 ntBASIC26.17■■□□□ 1.78
BRD9Q9H8M2 FCGRT-217ENST00000599988 660 ntTSL 5 BASIC26.17■■□□□ 1.78
BRD9Q9H8M2 EFNA1-202ENST00000368407 1926 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
BRD9Q9H8M2 SLC9A3-AS1-207ENST00000607286 1357 ntTSL 5 BASIC26.16■■□□□ 1.78
BRD9Q9H8M2 FOXO6-202ENST00000641094 1476 ntAPPRIS P1 BASIC26.16■■□□□ 1.78
BRD9Q9H8M2 ITPKA-201ENST00000260386 1824 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
BRD9Q9H8M2 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
BRD9Q9H8M2 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC26.15■■□□□ 1.78
BRD9Q9H8M2 GNAS-AS1_1.1-201ENST00000621898 103 ntBASIC26.15■■□□□ 1.78
BRD9Q9H8M2 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC26.14■■□□□ 1.78
BRD9Q9H8M2 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC26.14■■□□□ 1.78
BRD9Q9H8M2 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC26.14■■□□□ 1.78
BRD9Q9H8M2 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC26.14■■□□□ 1.78
BRD9Q9H8M2 SH3BP2-221ENST00000511747 2351 ntAPPRIS P3 TSL 1 (best) BASIC26.14■■□□□ 1.77
BRD9Q9H8M2 SHOX2-204ENST00000483851 1866 ntAPPRIS ALT2 TSL 2 BASIC26.13■■□□□ 1.77
BRD9Q9H8M2 MED25-210ENST00000612854 801 ntTSL 5 BASIC26.13■■□□□ 1.77
BRD9Q9H8M2 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC26.13■■□□□ 1.77
BRD9Q9H8M2 MED25-214ENST00000622402 642 ntTSL 5 BASIC26.13■■□□□ 1.77
BRD9Q9H8M2 ZNF787-203ENST00000610935 1925 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
BRD9Q9H8M2 PRELID2-207ENST00000511435 1894 ntAPPRIS ALT1 TSL 2 BASIC26.13■■□□□ 1.77
BRD9Q9H8M2 FEZ1-201ENST00000278919 1748 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
BRD9Q9H8M2 MOB2-207ENST00000614710 705 ntTSL 5 BASIC26.12■■□□□ 1.77
BRD9Q9H8M2 C19orf12-207ENST00000592153 1504 ntTSL 1 (best) BASIC26.12■■□□□ 1.77
BRD9Q9H8M2 MZT2B-201ENST00000281871 933 ntAPPRIS P3 TSL 1 (best) BASIC26.11■■□□□ 1.77
BRD9Q9H8M2 MZT2A-201ENST00000309451 624 ntAPPRIS P1 TSL 1 (best) BASIC26.11■■□□□ 1.77
BRD9Q9H8M2 GUK1-208ENST00000366728 842 ntTSL 2 BASIC26.11■■□□□ 1.77
BRD9Q9H8M2 CCDC88C-205ENST00000553403 1651 ntTSL 1 (best) BASIC26.1■■□□□ 1.77
BRD9Q9H8M2 OXLD1-201ENST00000374741 620 ntAPPRIS P1 TSL 1 (best) BASIC26.1■■□□□ 1.77
BRD9Q9H8M2 DSG2-202ENST00000585206 1081 ntTSL 2 BASIC26.1■■□□□ 1.77
BRD9Q9H8M2 MARCH11-201ENST00000332432 1741 ntAPPRIS P1 TSL 5 BASIC26.1■■□□□ 1.77
BRD9Q9H8M2 ABCB10P1-201ENST00000614297 2181 ntBASIC26.1■■□□□ 1.77
BRD9Q9H8M2 AMN-201ENST00000299155 1907 ntAPPRIS P2 TSL 1 (best) BASIC26.1■■□□□ 1.77
BRD9Q9H8M2 SP8-201ENST00000361443 1714 ntAPPRIS P3 TSL 1 (best) BASIC26.09■■□□□ 1.77
BRD9Q9H8M2 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC26.09■■□□□ 1.77
BRD9Q9H8M2 HOMER3-207ENST00000594794 903 ntTSL 5 BASIC26.09■■□□□ 1.77
BRD9Q9H8M2 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC26.09■■□□□ 1.77
BRD9Q9H8M2 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
BRD9Q9H8M2 AGAP3-216ENST00000479901 1881 ntTSL 5 BASIC26.08■■□□□ 1.77
BRD9Q9H8M2 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC26.08■■□□□ 1.77
BRD9Q9H8M2 FAM222B-205ENST00000577682 549 ntTSL 4 BASIC26.08■■□□□ 1.77
BRD9Q9H8M2 KLF16-204ENST00000617223 1133 ntAPPRIS P1 TSL 1 (best) BASIC26.08■■□□□ 1.77
BRD9Q9H8M2 FAM78B-201ENST00000338353 1597 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
BRD9Q9H8M2 IL17D-201ENST00000304920 1861 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
BRD9Q9H8M2 PPP1R14A-201ENST00000301242 777 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
BRD9Q9H8M2 AC107214.1-201ENST00000457303 559 ntTSL 1 (best) BASIC26.07■■□□□ 1.76
BRD9Q9H8M2 AL157400.5-201ENST00000507624 621 ntBASIC26.07■■□□□ 1.76
BRD9Q9H8M2 BCL7C-201ENST00000215115 1740 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
BRD9Q9H8M2 YAP1-204ENST00000526343 2393 ntTSL 5 BASIC26.07■■□□□ 1.76
BRD9Q9H8M2 IFI30-201ENST00000407280 1134 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
BRD9Q9H8M2 PSMG4-207ENST00000451246 824 ntTSL 3 BASIC26.06■■□□□ 1.76
BRD9Q9H8M2 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
BRD9Q9H8M2 AMZ2-201ENST00000359783 1722 ntTSL 5 BASIC26.05■■□□□ 1.76
BRD9Q9H8M2 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC26.05■■□□□ 1.76
BRD9Q9H8M2 GLTP-201ENST00000318348 2356 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
BRD9Q9H8M2 RDX-210ENST00000530301 1549 ntTSL 1 (best) BASIC26.05■■□□□ 1.76
BRD9Q9H8M2 C20orf24-201ENST00000342422 896 ntTSL 2 BASIC26.05■■□□□ 1.76
BRD9Q9H8M2 C20orf24-202ENST00000344795 1114 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
BRD9Q9H8M2 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
BRD9Q9H8M2 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC26.05■■□□□ 1.76
BRD9Q9H8M2 IRX1-201ENST00000302006 1858 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
BRD9Q9H8M2 AGAP1-202ENST00000336665 5427 ntAPPRIS P3 TSL 1 (best) BASIC26.04■■□□□ 1.76
BRD9Q9H8M2 MAPK3-203ENST00000395199 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC26.04■■□□□ 1.76
BRD9Q9H8M2 REST-210ENST00000638187 1334 ntTSL 5 BASIC26.04■■□□□ 1.76
BRD9Q9H8M2 RARRES2P1-201ENST00000474487 481 ntBASIC26.03■■□□□ 1.76
BRD9Q9H8M2 DCBLD1-201ENST00000296955 1979 ntAPPRIS P2 TSL 1 (best) BASIC26.03■■□□□ 1.76
BRD9Q9H8M2 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC26.03■■□□□ 1.76
BRD9Q9H8M2 TNFRSF25-204ENST00000356876 1625 ntAPPRIS ALT2 TSL 1 (best) BASIC26.03■■□□□ 1.76
BRD9Q9H8M2 NEUROG2-201ENST00000313341 2287 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
BRD9Q9H8M2 AC007029.1-201ENST00000604183 313 ntBASIC26.02■■□□□ 1.76
BRD9Q9H8M2 TNFRSF12A-201ENST00000326577 1033 ntAPPRIS P1 TSL 1 (best) BASIC26.01■■□□□ 1.75
BRD9Q9H8M2 KCNF1-201ENST00000295082 2289 ntAPPRIS P1 BASIC26■■□□□ 1.75
BRD9Q9H8M2 CGREF1-203ENST00000402394 1906 ntAPPRIS P2 TSL 2 BASIC26■■□□□ 1.75
BRD9Q9H8M2 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC26■■□□□ 1.75
BRD9Q9H8M2 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC26■■□□□ 1.75
BRD9Q9H8M2 PI4KAP2-202ENST00000450651 2294 ntTSL 5 BASIC25.99■■□□□ 1.75
BRD9Q9H8M2 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC25.99■■□□□ 1.75
BRD9Q9H8M2 PHOX2A-201ENST00000298231 1699 ntAPPRIS P1 TSL 1 (best) BASIC25.99■■□□□ 1.75
BRD9Q9H8M2 ACOT7-201ENST00000361521 2429 ntAPPRIS ALT2 TSL 1 (best) BASIC25.98■■□□□ 1.75
BRD9Q9H8M2 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC25.98■■□□□ 1.75
BRD9Q9H8M2 LYPD6B-204ENST00000409876 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC25.98■■□□□ 1.75
BRD9Q9H8M2 FOXE3-201ENST00000335071 1981 ntAPPRIS P1 BASIC25.98■■□□□ 1.75
BRD9Q9H8M2 AP004833.2-201ENST00000532228 1454 ntBASIC25.98■■□□□ 1.75
BRD9Q9H8M2 KIAA2013-202ENST00000376576 2539 ntTSL 2 BASIC25.97■■□□□ 1.75
BRD9Q9H8M2 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC25.97■■□□□ 1.75
BRD9Q9H8M2 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC25.97■■□□□ 1.75
BRD9Q9H8M2 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC25.97■■□□□ 1.75
BRD9Q9H8M2 AC133552.2-201ENST00000619106 1032 ntBASIC25.97■■□□□ 1.75
BRD9Q9H8M2 AC129492.7-201ENST00000622992 756 ntBASIC25.97■■□□□ 1.75
BRD9Q9H8M2 UBE2D2-205ENST00000505548 1113 ntTSL 1 (best) BASIC25.96■■□□□ 1.75
BRD9Q9H8M2 UBE2I-213ENST00000566587 1098 ntAPPRIS P1 TSL 2 BASIC25.96■■□□□ 1.75
BRD9Q9H8M2 FAM149A-201ENST00000227065 2708 ntAPPRIS P2 TSL 1 (best) BASIC25.95■■□□□ 1.75
BRD9Q9H8M2 LRRC10B-201ENST00000378075 2219 ntAPPRIS P1 BASIC25.95■■□□□ 1.75
BRD9Q9H8M2 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC25.95■■□□□ 1.74
BRD9Q9H8M2 AL592293.1-201ENST00000502889 1188 ntBASIC25.95■■□□□ 1.74
BRD9Q9H8M2 DUX4L18-201ENST00000553347 1267 ntBASIC25.95■■□□□ 1.74
BRD9Q9H8M2 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC25.95■■□□□ 1.74
Retrieved 100 of 98,524 protein–RNA pairs in 44.6 ms