RNA–Protein interactions for RNA: ENST00000326577.8

TNFRSF12A-201, Transcript of TNF receptor superfamily member 12A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFRSF12A, Length 1,033 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF12A-201ENST00000326577 NISCHQ9Y2I1 1504 aa59.72■■■■■ 7.15
TNFRSF12A-201ENST00000326577 CCDC180Q9P1Z9 1646 aa53.37■■■■■ 6.13
TNFRSF12A-201ENST00000326577 ABCC9O60706 1549 aa53.07■■■■■ 6.09
TNFRSF12A-201ENST00000326577 RB1CC1Q8TDY2 1594 aa50.67■■■■■ 5.7
TNFRSF12A-201ENST00000326577 NACADO15069 1562 aa50.43■■■■■ 5.66
TNFRSF12A-201ENST00000326577 DCAF8L2P0C7V8 631 aa50.37■■■■■ 5.65
TNFRSF12A-201ENST00000326577 MYO15BQ96JP2 1530 aa49.85■■■■■ 5.57
TNFRSF12A-201ENST00000326577 ZCCHC6Q5VYS8 1495 aaKnown RBP49.54■■■■■ 5.52
TNFRSF12A-201ENST00000326577 PABPN1Q86U42 306 aaKnown RBP eCLIP49.53■■■■■ 5.522e-6■□□□□ 8.8
TNFRSF12A-201ENST00000326577 DNAJC5BQ9UF47 199 aa49.51■■■■■ 5.52
TNFRSF12A-201ENST00000326577 UNC13AQ9UPW8 1703 aa49.46■■■■■ 5.51
TNFRSF12A-201ENST00000326577 DCAF1Q9Y4B6 1507 aa49.34■■■■■ 5.49
TNFRSF12A-201ENST00000326577 BICRAQ9NZM4 1560 aa49.15■■■■■ 5.46
TNFRSF12A-201ENST00000326577 SCRIBQ14160 1630 aa48.67■■■■■ 5.38
TNFRSF12A-201ENST00000326577 SHROOM4Q9ULL8 1493 aa48.55■■■■■ 5.36
TNFRSF12A-201ENST00000326577 CC2D2AQ9P2K1 1620 aa47.94■■■■■ 5.26
TNFRSF12A-201ENST00000326577 EIF4G1Q04637 1599 aaKnown RBP47.92■■■■■ 5.26
TNFRSF12A-201ENST00000326577 CECR2Q9BXF3 1484 aa47.78■■■■■ 5.24
TNFRSF12A-201ENST00000326577 NCAPD3P42695 1498 aa46.57■■■■■ 5.04
TNFRSF12A-201ENST00000326577 SMARCA4P51532 1647 aa46.47■■■■■ 5.03
TNFRSF12A-201ENST00000326577 ATAD2BQ9ULI0 1458 aa46.46■■■■■ 5.03
TNFRSF12A-201ENST00000326577 SMARCA2P51531 1590 aa46.35■■■■■ 5.01
TNFRSF12A-201ENST00000326577 BAZ1AQ9NRL2 1556 aaPredicted RBP46.32■■■■■ 5.01
TNFRSF12A-201ENST00000326577 HMGXB3Q12766 1538 aa46.21■■■■■ 4.99
TNFRSF12A-201ENST00000326577 BAZ1BQ9UIG0 1483 aaKnown RBP46.03■■■■■ 4.96
TNFRSF12A-201ENST00000326577 PEG3Q9GZU2 1588 aa46.02■■■■■ 4.96
TNFRSF12A-201ENST00000326577 MROH2BQ7Z745 1585 aa46.01■■■■■ 4.96
TNFRSF12A-201ENST00000326577 ERCC6Q03468 1493 aa45.81■■■■■ 4.92
TNFRSF12A-201ENST00000326577 NESP48681 1621 aa45.7■■■■■ 4.91
TNFRSF12A-201ENST00000326577 CUX2O14529 1486 aa45.59■■■■■ 4.89
TNFRSF12A-201ENST00000326577 WIZO95785 1651 aa45.47■■■■■ 4.87
TNFRSF12A-201ENST00000326577 LAMC3Q9Y6N6 1575 aa45.42■■■■■ 4.86
TNFRSF12A-201ENST00000326577 RSF1Q96T23 1441 aaPredicted RBP45.22■■■■■ 4.83
TNFRSF12A-201ENST00000326577 DNAJC5Q9H3Z4 198 aa45.22■■■■■ 4.83
TNFRSF12A-201ENST00000326577 PDS5BQ9NTI5 1447 aa45.21■■■■■ 4.83
TNFRSF12A-201ENST00000326577 CADPSQ9ULU8 1353 aa45.2■■■■■ 4.83
TNFRSF12A-201ENST00000326577 THOC2Q8NI27 1593 aaKnown RBP45.1■■■■■ 4.81
TNFRSF12A-201ENST00000326577 KIF21AQ7Z4S6 1674 aa45.07■■■■■ 4.81
TNFRSF12A-201ENST00000326577 TOP2AP11388 1531 aaKnown RBP44.92■■■■■ 4.78
TNFRSF12A-201ENST00000326577 MRC2Q9UBG0 1479 aa44.75■■■■■ 4.75
TNFRSF12A-201ENST00000326577 CFTRP13569 1480 aa44.72■■■■■ 4.75
TNFRSF12A-201ENST00000326577 FANCD2Q9BXW9 1451 aa44.65■■■■■ 4.74
TNFRSF12A-201ENST00000326577 CEP164Q9UPV0 1460 aa44.65■■■■■ 4.74
TNFRSF12A-201ENST00000326577 WDR62O43379 1518 aa44.6■■■■■ 4.73
TNFRSF12A-201ENST00000326577 CCDC88BA6NC98 1476 aa44.45■■■■■ 4.71
TNFRSF12A-201ENST00000326577 URB2Q14146 1524 aaKnown RBP44.24■■■■■ 4.67
TNFRSF12A-201ENST00000326577 PRDM2Q13029 1718 aa44.23■■■■■ 4.67
TNFRSF12A-201ENST00000326577 TOPBP1Q92547 1522 aa43.83■■■■■ 4.61
TNFRSF12A-201ENST00000326577 ABCC8Q09428 1581 aa43.8■■■■■ 4.6
TNFRSF12A-201ENST00000326577 IFT140Q96RY7 1462 aa43.76■■■■■ 4.6
TNFRSF12A-201ENST00000326577 DNMBPQ6XZF7 1577 aa43.69■■■■■ 4.58
TNFRSF12A-201ENST00000326577 OSCARQ8IYS5 282 aa43.67■■■■■ 4.58
TNFRSF12A-201ENST00000326577 ZNF608Q9ULD9 1512 aaPredicted RBP43.63■■■■■ 4.58
TNFRSF12A-201ENST00000326577 SUPT5HO00267 1087 aaKnown RBP43.58■■■■■ 4.57
TNFRSF12A-201ENST00000326577 POLA1P09884 1462 aaPredicted RBP43.41■■■■■ 4.54
TNFRSF12A-201ENST00000326577 TRIM41Q8WV44 630 aa43.39■■■■■ 4.54
TNFRSF12A-201ENST00000326577 TARBP1Q13395 1621 aaKnown RBP43.39■■■■■ 4.54
TNFRSF12A-201ENST00000326577 EIF4G3O43432 1585 aaKnown RBP43.37■■■■■ 4.53
TNFRSF12A-201ENST00000326577 AQRO60306 1485 aaKnown RBP eCLIP43.32■■■■■ 4.532e-6■■■■■ 28.3
TNFRSF12A-201ENST00000326577 SOGA1O94964 1423 aa43.27■■■■■ 4.52
TNFRSF12A-201ENST00000326577 RAD54L2Q9Y4B4 1467 aa43.26■■■■■ 4.52
TNFRSF12A-201ENST00000326577 CUX1P39880 1505 aa43.2■■■■■ 4.51
TNFRSF12A-201ENST00000326577 FGD5Q6ZNL6 1462 aa43.19■■■■■ 4.5
TNFRSF12A-201ENST00000326577 TDRD9Q8NDG6 1382 aaKnown RBP43.14■■■■■ 4.5
TNFRSF12A-201ENST00000326577 FBLN2P98095 1184 aa43.03■■■■■ 4.48
TNFRSF12A-201ENST00000326577 CHD1O14646 1710 aa42.98■■■■■ 4.47
TNFRSF12A-201ENST00000326577 WDR97A6NE52 1622 aa42.97■■■■■ 4.47
TNFRSF12A-201ENST00000326577 RIMBP3CA6NJZ7 1639 aa42.94■■■■■ 4.46
TNFRSF12A-201ENST00000326577 RIMBP3BA6NNM3 1639 aa42.94■■■■■ 4.46
TNFRSF12A-201ENST00000326577 RIMBP3Q9UFD9 1639 aa42.94■■■■■ 4.46
TNFRSF12A-201ENST00000326577 SNAPC4Q5SXM2 1469 aa42.86■■■■■ 4.45
TNFRSF12A-201ENST00000326577 ARHGEF11O15085 1522 aa42.86■■■■■ 4.45
TNFRSF12A-201ENST00000326577 GRIN2BQ13224 1484 aa42.82■■■■■ 4.45
TNFRSF12A-201ENST00000326577 MAGI1Q96QZ7 1491 aaPredicted RBP42.77■■■■■ 4.44
TNFRSF12A-201ENST00000326577 CHMP7Q8WUX9 453 aaPredicted RBP42.77■■■■■ 4.44
TNFRSF12A-201ENST00000326577 ABCA10Q8WWZ4 1543 aa42.73■■■■■ 4.43
TNFRSF12A-201ENST00000326577 GAPVD1Q14C86 1478 aa42.72■■■■■ 4.43
TNFRSF12A-201ENST00000326577 WRNQ14191 1432 aaPredicted RBP eCLIP42.67■■■■■ 4.42
TNFRSF12A-201ENST00000326577 SYNJ2O15056 1496 aa42.63■■■■■ 4.42
TNFRSF12A-201ENST00000326577 PBRM1Q86U86 1689 aa42.61■■■■■ 4.41
TNFRSF12A-201ENST00000326577 CYB5RLQ6IPT4 315 aa42.61■■■■■ 4.41
TNFRSF12A-201ENST00000326577 TOP2BQ02880 1626 aa42.6■■■■■ 4.41
TNFRSF12A-201ENST00000326577 BIVM-ERCC5R4GMW8 1640 aa42.59■■■■■ 4.41
TNFRSF12A-201ENST00000326577 ABCA5Q8WWZ7 1642 aa42.58■■■■■ 4.41
TNFRSF12A-201ENST00000326577 SYNJ1O43426 1573 aa42.55■■■■■ 4.4
TNFRSF12A-201ENST00000326577 CLASP1Q7Z460 1538 aa42.51■■■■■ 4.4
TNFRSF12A-201ENST00000326577 ARAP1Q96P48 1450 aa42.46■■■■■ 4.39
TNFRSF12A-201ENST00000326577 GRIN2AQ12879 1464 aa42.25■■■■■ 4.35
TNFRSF12A-201ENST00000326577 ADAMTS12P58397 1594 aa42.23■■■■■ 4.35
TNFRSF12A-201ENST00000326577 FHAD1B1AJZ9 1412 aa42.2■■■■■ 4.35
TNFRSF12A-201ENST00000326577 ERICH3Q5RHP9 1530 aa42.2■■■■■ 4.35
TNFRSF12A-201ENST00000326577 NUP160Q12769 1436 aa42.1■■■■■ 4.33
TNFRSF12A-201ENST00000326577 CEP170Q5SW79 1584 aa42.06■■■■■ 4.32
TNFRSF12A-201ENST00000326577 TRHP20396 242 aaPredicted RBP42.03■■■■■ 4.32
TNFRSF12A-201ENST00000326577 ERCC6L2Q5T890 1561 aa41.88■■■■■ 4.3
TNFRSF12A-201ENST00000326577 KIF27Q86VH2 1401 aa41.84■■■■■ 4.29
TNFRSF12A-201ENST00000326577 SHROOM2Q13796 1616 aa41.84■■■■■ 4.29
TNFRSF12A-201ENST00000326577 IGF1RP08069 1367 aa41.8■■■■■ 4.28
TNFRSF12A-201ENST00000326577 JPH4Q96JJ6 628 aa41.76■■■■■ 4.28
TNFRSF12A-201ENST00000326577 PRG4Q92954 1404 aaPredicted RBP41.7■■■■■ 4.27
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms