Protein–RNA interactions for Protein: Q9H8M2

BRD9, Bromodomain-containing protein 9, humanhuman

Predictions only

Length 597 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRD9Q9H8M2 FBLL1-201ENST00000338333 1519 ntAPPRIS P1 BASIC35.74■■■■□ 3.31
BRD9Q9H8M2 SSSCA1-205ENST00000527920 806 ntTSL 3 BASIC35.32■■■■□ 3.24
BRD9Q9H8M2 HRAS-203ENST00000397596 1100 ntAPPRIS P1 TSL 3 BASIC34.81■■■■□ 3.16
BRD9Q9H8M2 PPP1CA-203ENST00000376745 1476 ntAPPRIS P1 TSL 1 (best) BASIC34.8■■■■□ 3.16
BRD9Q9H8M2 AES-202ENST00000327141 1608 ntAPPRIS P1 TSL 1 (best) BASIC34.57■■■■□ 3.12
BRD9Q9H8M2 CSNK1E-204ENST00000403904 1580 ntAPPRIS P1 TSL 5 BASIC34.4■■■■□ 3.1
BRD9Q9H8M2 TCF15-201ENST00000246080 1555 ntAPPRIS P1 TSL 1 (best) BASIC34.29■■■■□ 3.08
BRD9Q9H8M2 AL356512.1-201ENST00000607453 1739 ntBASIC34.13■■■■□ 3.05
BRD9Q9H8M2 ANKRD60-201ENST00000457363 1038 ntAPPRIS P1 TSL 5 BASIC33.87■■■■□ 3.01
BRD9Q9H8M2 PPP2CB-204ENST00000518564 691 ntTSL 3 BASIC33.74■■■□□ 2.99
BRD9Q9H8M2 OLFM1-208ENST00000392991 1057 ntTSL 2 BASIC33.55■■■□□ 2.96
BRD9Q9H8M2 TAF5L-202ENST00000366674 492 ntTSL 3 BASIC33.54■■■□□ 2.96
BRD9Q9H8M2 CACNG8-202ENST00000638874 1278 ntAPPRIS P2 TSL 1 (best) BASIC33.53■■■□□ 2.96
BRD9Q9H8M2 CDV3-203ENST00000431519 955 ntTSL 1 (best) BASIC33.45■■■□□ 2.95
BRD9Q9H8M2 ZFYVE21-201ENST00000216602 1521 ntAPPRIS ALT2 TSL 2 BASIC33.36■■■□□ 2.93
BRD9Q9H8M2 PHF10-201ENST00000339209 1719 ntAPPRIS P4 TSL 1 (best) BASIC33.33■■■□□ 2.93
BRD9Q9H8M2 MPND-201ENST00000262966 1567 ntAPPRIS P3 TSL 1 (best) BASIC33.19■■■□□ 2.9
BRD9Q9H8M2 GALR3-201ENST00000249041 1157 ntAPPRIS P1 TSL 1 (best) BASIC33.12■■■□□ 2.89
BRD9Q9H8M2 HES6-203ENST00000409160 1600 ntTSL 2 BASIC32.94■■■□□ 2.86
BRD9Q9H8M2 ALYREF-202ENST00000505490 1088 ntAPPRIS P1 TSL 1 (best) BASIC32.9■■■□□ 2.86
BRD9Q9H8M2 CMTM4-202ENST00000394106 1187 ntAPPRIS P1 TSL 1 (best) BASIC32.8■■■□□ 2.84
BRD9Q9H8M2 CMTM4-204ENST00000563952 1023 ntTSL 1 (best) BASIC32.8■■■□□ 2.84
BRD9Q9H8M2 FAM89B-203ENST00000530349 1263 ntAPPRIS P1 TSL 2 BASIC32.74■■■□□ 2.83
BRD9Q9H8M2 AL357033.3-201ENST00000620143 614 ntTSL 3 BASIC32.74■■■□□ 2.83
BRD9Q9H8M2 GIPC1-205ENST00000586027 1386 ntAPPRIS P1 TSL 2 BASIC32.7■■■□□ 2.83
BRD9Q9H8M2 PRR5-217ENST00000617066 1726 ntTSL 5 BASIC32.66■■■□□ 2.82
BRD9Q9H8M2 INO80B-201ENST00000233331 1261 ntAPPRIS P1 TSL 1 (best) BASIC32.65■■■□□ 2.82
BRD9Q9H8M2 PTF1A-201ENST00000376504 1537 ntAPPRIS P1 TSL 1 (best) BASIC32.6■■■□□ 2.81
BRD9Q9H8M2 PRR5-216ENST00000611394 1843 ntTSL 2 BASIC32.56■■■□□ 2.8
BRD9Q9H8M2 INO80B-203ENST00000409917 796 ntTSL 2 BASIC32.51■■■□□ 2.79
BRD9Q9H8M2 CYBA-201ENST00000261623 797 ntAPPRIS P1 TSL 1 (best) BASIC32.43■■■□□ 2.78
BRD9Q9H8M2 MAF-203ENST00000569649 1217 ntAPPRIS ALT2 TSL 5 BASIC32.3■■■□□ 2.76
BRD9Q9H8M2 SEPT3-204ENST00000406029 1866 ntTSL 5 BASIC32.15■■■□□ 2.74
BRD9Q9H8M2 AC006077.2-201ENST00000623591 457 ntBASIC32.15■■■□□ 2.74
BRD9Q9H8M2 SLC25A28-201ENST00000370495 1451 ntAPPRIS P1 TSL 1 (best) BASIC32.13■■■□□ 2.73
BRD9Q9H8M2 AC008738.5-201ENST00000587312 482 ntTSL 3 BASIC32.13■■■□□ 2.73
BRD9Q9H8M2 ZNRF2P1-201ENST00000441407 443 ntBASIC32.12■■■□□ 2.73
BRD9Q9H8M2 SATB1-AS1-216ENST00000598149 1119 ntTSL 2 BASIC32.05■■■□□ 2.72
BRD9Q9H8M2 AC015813.7-201ENST00000623294 581 ntBASIC32.01■■■□□ 2.71
BRD9Q9H8M2 PRELID2-202ENST00000394450 1102 ntTSL 1 (best) BASIC31.84■■■□□ 2.69
BRD9Q9H8M2 CSNK1E-206ENST00000413574 1631 ntTSL 5 BASIC31.82■■■□□ 2.69
BRD9Q9H8M2 ARTN-201ENST00000372354 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC31.8■■■□□ 2.68
BRD9Q9H8M2 NT5DC2-203ENST00000459839 1639 ntTSL 1 (best) BASIC31.65■■■□□ 2.66
BRD9Q9H8M2 UBE2M-201ENST00000253023 1508 ntAPPRIS P1 TSL 1 (best) BASIC31.63■■■□□ 2.65
BRD9Q9H8M2 C11orf68-202ENST00000449692 1559 ntAPPRIS P3 TSL 1 (best) BASIC31.58■■■□□ 2.65
BRD9Q9H8M2 NKAIN4-203ENST00000370316 1430 ntAPPRIS P1 TSL 1 (best) BASIC31.54■■■□□ 2.64
BRD9Q9H8M2 FAM89B-202ENST00000449319 1337 ntTSL 1 (best) BASIC31.52■■■□□ 2.64
BRD9Q9H8M2 NECTIN3-201ENST00000319792 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC31.44■■■□□ 2.62
BRD9Q9H8M2 HAGHL-201ENST00000341413 1701 ntTSL 2 BASIC31.41■■■□□ 2.62
BRD9Q9H8M2 CAPNS1-206ENST00000588815 1471 ntAPPRIS P2 TSL 1 (best) BASIC31.36■■■□□ 2.61
BRD9Q9H8M2 AP002365.1-201ENST00000603448 772 ntBASIC31.33■■■□□ 2.61
BRD9Q9H8M2 CLEC3B-201ENST00000296130 936 ntAPPRIS P1 TSL 1 (best) BASIC31.17■■■□□ 2.58
BRD9Q9H8M2 AC079848.1-201ENST00000511301 327 ntTSL 3 BASIC31.11■■■□□ 2.57
BRD9Q9H8M2 SYNGR1-202ENST00000318801 1361 ntTSL 1 (best) BASIC31.1■■■□□ 2.57
BRD9Q9H8M2 MBD2-202ENST00000398398 1237 ntTSL 2 BASIC31.1■■■□□ 2.57
BRD9Q9H8M2 MBD2-205ENST00000583046 1182 ntTSL 1 (best) BASIC31.1■■■□□ 2.57
BRD9Q9H8M2 H2AFV-202ENST00000308153 752 ntAPPRIS P4 TSL 1 (best) BASIC31.09■■■□□ 2.57
BRD9Q9H8M2 FAM58A-202ENST00000440428 1164 ntAPPRIS P2 TSL 2 BASIC31.09■■■□□ 2.57
BRD9Q9H8M2 FGF2-203ENST00000614010 867 ntTSL 1 (best) BASIC31.08■■■□□ 2.57
BRD9Q9H8M2 NT5M-207ENST00000616989 1635 ntTSL 1 (best) BASIC31.04■■■□□ 2.56
BRD9Q9H8M2 HMGB1-205ENST00000399494 1282 ntAPPRIS P1 TSL 2 BASIC31.01■■■□□ 2.55
BRD9Q9H8M2 PQLC1-211ENST00000590381 1247 ntTSL 2 BASIC31.01■■■□□ 2.55
BRD9Q9H8M2 METRNL-201ENST00000320095 1605 ntAPPRIS P1 TSL 1 (best) BASIC30.97■■■□□ 2.55
BRD9Q9H8M2 ARTN-211ENST00000498139 1303 ntAPPRIS P4 TSL 1 (best) BASIC30.96■■■□□ 2.55
BRD9Q9H8M2 HOXB3-208ENST00000476342 1420 ntAPPRIS P1 TSL 1 (best) BASIC30.95■■■□□ 2.54
BRD9Q9H8M2 AC005524.1-203ENST00000586528 451 ntTSL 3 BASIC30.94■■■□□ 2.54
BRD9Q9H8M2 AL355297.4-201ENST00000603191 1249 ntTSL 3 BASIC30.93■■■□□ 2.54
BRD9Q9H8M2 FAM149A-205ENST00000502970 1990 ntAPPRIS P2 TSL 5 BASIC30.93■■■□□ 2.54
BRD9Q9H8M2 LINC01578-201ENST00000553829 732 ntTSL 2 BASIC30.86■■■□□ 2.53
BRD9Q9H8M2 CHCHD4-202ENST00000396914 1405 ntAPPRIS P1 TSL 1 (best) BASIC30.86■■■□□ 2.53
BRD9Q9H8M2 NKX1-1-201ENST00000422806 1236 ntAPPRIS P1 TSL 5 BASIC30.85■■■□□ 2.53
BRD9Q9H8M2 CYHR1-209ENST00000530374 1870 ntTSL 3 BASIC30.84■■■□□ 2.53
BRD9Q9H8M2 NRGN-201ENST00000284292 1306 ntAPPRIS P1 TSL 1 (best) BASIC30.81■■■□□ 2.52
BRD9Q9H8M2 RAN-202ENST00000392369 1530 ntAPPRIS P1 TSL 1 (best) BASIC30.79■■■□□ 2.52
BRD9Q9H8M2 AL136373.1-201ENST00000634804 1449 ntAPPRIS P1 BASIC30.78■■■□□ 2.52
BRD9Q9H8M2 MAP6D1-202ENST00000431348 890 ntAPPRIS ALT2 TSL 2 BASIC30.77■■■□□ 2.52
BRD9Q9H8M2 LIMCH1-211ENST00000509638 1570 ntTSL 1 (best) BASIC30.75■■■□□ 2.51
BRD9Q9H8M2 AP001107.7-201ENST00000533287 272 ntTSL 2 BASIC30.74■■■□□ 2.51
BRD9Q9H8M2 FAM149A-215ENST00000514153 2070 ntAPPRIS P2 TSL 5 BASIC30.72■■■□□ 2.51
BRD9Q9H8M2 CBX4-202ENST00000448310 718 ntAPPRIS ALT2 TSL 3 BASIC30.7■■■□□ 2.51
BRD9Q9H8M2 AC116565.1-201ENST00000610212 2421 ntAPPRIS P1 BASIC30.69■■■□□ 2.5
BRD9Q9H8M2 AGTRAP-204ENST00000376637 1067 ntTSL 2 BASIC30.69■■■□□ 2.5
BRD9Q9H8M2 GSTZ1-201ENST00000216465 1338 ntAPPRIS P2 TSL 1 (best) BASIC30.68■■■□□ 2.5
BRD9Q9H8M2 HRH3-201ENST00000317393 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC30.66■■■□□ 2.5
BRD9Q9H8M2 ZNF358-202ENST00000597229 1954 ntAPPRIS P1 TSL 2 BASIC30.65■■■□□ 2.5
BRD9Q9H8M2 DYNLL1-207ENST00000549989 719 ntAPPRIS P1 TSL 1 (best) BASIC30.65■■■□□ 2.5
BRD9Q9H8M2 DYNLL1-208ENST00000550178 581 ntBASIC30.65■■■□□ 2.5
BRD9Q9H8M2 NT5DC2-202ENST00000422318 1795 ntAPPRIS ALT2 TSL 5 BASIC30.64■■■□□ 2.49
BRD9Q9H8M2 CCM2-219ENST00000544363 1620 ntTSL 3 BASIC30.61■■■□□ 2.49
BRD9Q9H8M2 MSANTD3-203ENST00000395067 1362 ntAPPRIS P1 TSL 1 (best) BASIC30.6■■■□□ 2.49
BRD9Q9H8M2 FBRSL1-201ENST00000434748 5568 ntAPPRIS P2 TSL 1 (best) BASIC30.55■■■□□ 2.48
BRD9Q9H8M2 SAP30-201ENST00000296504 1108 ntAPPRIS P1 TSL 1 (best) BASIC30.54■■■□□ 2.48
BRD9Q9H8M2 MPND-207ENST00000599840 1611 ntAPPRIS ALT2 TSL 5 BASIC30.53■■■□□ 2.48
BRD9Q9H8M2 LINC01578-203ENST00000554669 578 ntTSL 5 BASIC30.52■■■□□ 2.48
BRD9Q9H8M2 ECHS1-201ENST00000368547 1617 ntAPPRIS P1 TSL 1 (best) BASIC30.5■■■□□ 2.47
BRD9Q9H8M2 PWWP2B-202ENST00000631148 2013 ntTSL 5 BASIC30.47■■■□□ 2.47
BRD9Q9H8M2 LINC01089-207ENST00000538335 630 ntTSL 3 BASIC30.47■■■□□ 2.47
BRD9Q9H8M2 ANAPC11-203ENST00000392376 687 ntAPPRIS P1 TSL 1 (best) BASIC30.46■■■□□ 2.47
BRD9Q9H8M2 PLPP2-203ENST00000434325 1383 ntAPPRIS P1 TSL 1 (best) BASIC30.41■■■□□ 2.46
BRD9Q9H8M2 INAFM1-201ENST00000552360 1255 ntAPPRIS P1 BASIC30.4■■■□□ 2.46
Retrieved 100 of 98,524 protein–RNA pairs in 11.7 ms