Protein–RNA interactions for Protein: Q8TEJ3

SH3RF3, SH3 domain-containing RING finger protein 3, humanhuman

Predicted RBP Predictions only

Length 882 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF3Q8TEJ3 SIGMAR1-203ENST00000378892 1743 ntTSL 2 BASIC30.27■■■□□ 2.44
SH3RF3Q8TEJ3 TNFRSF25-205ENST00000377782 1632 ntAPPRIS P4 TSL 1 (best) BASIC30.26■■■□□ 2.44
SH3RF3Q8TEJ3 MED25-210ENST00000612854 801 ntTSL 5 BASIC30.26■■■□□ 2.43
SH3RF3Q8TEJ3 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC30.26■■■□□ 2.43
SH3RF3Q8TEJ3 MED25-214ENST00000622402 642 ntTSL 5 BASIC30.26■■■□□ 2.43
SH3RF3Q8TEJ3 RUNDC3A-206ENST00000590941 1675 ntTSL 1 (best) BASIC30.26■■■□□ 2.43
SH3RF3Q8TEJ3 RAD51-210ENST00000557850 1397 ntTSL 2 BASIC30.26■■■□□ 2.43
SH3RF3Q8TEJ3 RALY-201ENST00000246194 1789 ntAPPRIS P4 TSL 1 (best) BASIC30.25■■■□□ 2.43
SH3RF3Q8TEJ3 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC30.24■■■□□ 2.43
SH3RF3Q8TEJ3 TBX2-AS1-202ENST00000589814 539 ntTSL 3 BASIC30.24■■■□□ 2.43
SH3RF3Q8TEJ3 DDAH2-212ENST00000375789 1688 ntAPPRIS P1 TSL 2 BASIC30.23■■■□□ 2.43
SH3RF3Q8TEJ3 DDAH2-213ENST00000375792 1688 ntAPPRIS P1 TSL 1 (best) BASIC30.23■■■□□ 2.43
SH3RF3Q8TEJ3 ANKRD13D-211ENST00000511455 2139 ntAPPRIS P1 TSL 1 (best) BASIC30.23■■■□□ 2.43
SH3RF3Q8TEJ3 MAP4K3-211ENST00000484274 407 ntTSL 2 BASIC30.23■■■□□ 2.43
SH3RF3Q8TEJ3 FEZF2-202ENST00000475839 1918 ntAPPRIS P1 TSL 1 (best) BASIC30.23■■■□□ 2.43
SH3RF3Q8TEJ3 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC30.23■■■□□ 2.43
SH3RF3Q8TEJ3 MAPK3-205ENST00000395202 1008 ntTSL 1 (best) BASIC30.22■■■□□ 2.43
SH3RF3Q8TEJ3 CHST14-202ENST00000559991 1968 ntTSL 5 BASIC30.21■■■□□ 2.43
SH3RF3Q8TEJ3 PXMP2-201ENST00000317479 957 ntAPPRIS P1 TSL 1 (best) BASIC30.21■■■□□ 2.43
SH3RF3Q8TEJ3 HES4-202ENST00000428771 1040 ntTSL 2 BASIC30.21■■■□□ 2.43
SH3RF3Q8TEJ3 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC30.21■■■□□ 2.43
SH3RF3Q8TEJ3 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC30.2■■■□□ 2.42
SH3RF3Q8TEJ3 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC30.2■■■□□ 2.42
SH3RF3Q8TEJ3 FOXA2-202ENST00000419308 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC30.2■■■□□ 2.42
SH3RF3Q8TEJ3 HMCES-202ENST00000389735 1763 ntAPPRIS P1 TSL 1 (best) BASIC30.19■■■□□ 2.42
SH3RF3Q8TEJ3 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC30.19■■■□□ 2.42
SH3RF3Q8TEJ3 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC30.19■■■□□ 2.42
SH3RF3Q8TEJ3 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC30.19■■■□□ 2.42
SH3RF3Q8TEJ3 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC30.18■■■□□ 2.42
SH3RF3Q8TEJ3 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC30.18■■■□□ 2.42
SH3RF3Q8TEJ3 SPATA5L1-208ENST00000638607 1863 ntTSL 2 BASIC30.17■■■□□ 2.42
SH3RF3Q8TEJ3 IZUMO4-202ENST00000395301 1021 ntAPPRIS ALT2 TSL 1 (best) BASIC30.17■■■□□ 2.42
SH3RF3Q8TEJ3 NPW-202ENST00000566435 991 ntAPPRIS ALT2 TSL 1 (best) BASIC30.17■■■□□ 2.42
SH3RF3Q8TEJ3 AGFG1-205ENST00000409979 2089 ntAPPRIS ALT1 TSL 5 BASIC30.17■■■□□ 2.42
SH3RF3Q8TEJ3 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC30.16■■■□□ 2.42
SH3RF3Q8TEJ3 AC092296.2-201ENST00000589470 999 ntBASIC30.16■■■□□ 2.42
SH3RF3Q8TEJ3 MFSD12-202ENST00000389395 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC30.15■■■□□ 2.42
SH3RF3Q8TEJ3 HDGF-210ENST00000537739 2073 ntAPPRIS P1 TSL 1 (best) BASIC30.15■■■□□ 2.42
SH3RF3Q8TEJ3 GPR137-202ENST00000377702 1478 ntTSL 1 (best) BASIC30.14■■■□□ 2.42
SH3RF3Q8TEJ3 RNF130-205ENST00000521389 2263 ntAPPRIS P1 TSL 1 (best) BASIC30.14■■■□□ 2.42
SH3RF3Q8TEJ3 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC30.14■■■□□ 2.42
SH3RF3Q8TEJ3 SLC35A1-203ENST00000369557 1653 ntTSL 2 BASIC30.14■■■□□ 2.41
SH3RF3Q8TEJ3 MTCH1-202ENST00000373627 2057 ntAPPRIS P1 TSL 1 (best) BASIC30.13■■■□□ 2.41
SH3RF3Q8TEJ3 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC30.13■■■□□ 2.41
SH3RF3Q8TEJ3 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC30.13■■■□□ 2.41
SH3RF3Q8TEJ3 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC30.12■■■□□ 2.41
SH3RF3Q8TEJ3 AP002414.2-202ENST00000590929 1450 ntBASIC30.12■■■□□ 2.41
SH3RF3Q8TEJ3 SYT12-205ENST00000527043 1661 ntAPPRIS P1 TSL 1 (best) BASIC30.11■■■□□ 2.41
SH3RF3Q8TEJ3 MCCD1-201ENST00000376191 955 ntAPPRIS P1 TSL 1 (best) BASIC30.11■■■□□ 2.41
SH3RF3Q8TEJ3 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC30.11■■■□□ 2.41
SH3RF3Q8TEJ3 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC30.11■■■□□ 2.41
SH3RF3Q8TEJ3 LRRC10B-201ENST00000378075 2219 ntAPPRIS P1 BASIC30.11■■■□□ 2.41
SH3RF3Q8TEJ3 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC30.11■■■□□ 2.41
SH3RF3Q8TEJ3 GNAS-207ENST00000354359 1975 ntTSL 1 (best) BASIC30.1■■■□□ 2.41
SH3RF3Q8TEJ3 GNAS-210ENST00000371085 1972 ntTSL 1 (best) BASIC30.1■■■□□ 2.41
SH3RF3Q8TEJ3 YBX2-201ENST00000007699 1590 ntAPPRIS P1 TSL 1 (best) BASIC30.1■■■□□ 2.41
SH3RF3Q8TEJ3 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC30.09■■■□□ 2.41
SH3RF3Q8TEJ3 TNFRSF4-201ENST00000379236 1068 ntAPPRIS P1 TSL 1 (best) BASIC30.09■■■□□ 2.41
SH3RF3Q8TEJ3 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC30.09■■■□□ 2.41
SH3RF3Q8TEJ3 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC30.09■■■□□ 2.41
SH3RF3Q8TEJ3 SDCCAG3-201ENST00000298537 2314 ntTSL 1 (best) BASIC30.08■■■□□ 2.41
SH3RF3Q8TEJ3 DERA-201ENST00000428559 1705 ntAPPRIS P1 TSL 1 (best) BASIC30.08■■■□□ 2.41
SH3RF3Q8TEJ3 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC30.08■■■□□ 2.41
SH3RF3Q8TEJ3 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC30.08■■■□□ 2.41
SH3RF3Q8TEJ3 MOB2-207ENST00000614710 705 ntTSL 5 BASIC30.08■■■□□ 2.41
SH3RF3Q8TEJ3 HTR6-201ENST00000289753 1984 ntAPPRIS P1 TSL 1 (best) BASIC30.08■■■□□ 2.41
SH3RF3Q8TEJ3 AL157400.5-201ENST00000507624 621 ntBASIC30.07■■■□□ 2.4
SH3RF3Q8TEJ3 AC126177.7-201ENST00000547904 679 ntBASIC30.07■■■□□ 2.4
SH3RF3Q8TEJ3 TMEM187-201ENST00000369982 1880 ntAPPRIS P1 TSL 1 (best) BASIC30.07■■■□□ 2.4
SH3RF3Q8TEJ3 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC30.06■■■□□ 2.4
SH3RF3Q8TEJ3 FOXO6-202ENST00000641094 1476 ntAPPRIS P1 BASIC30.06■■■□□ 2.4
SH3RF3Q8TEJ3 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC30.06■■■□□ 2.4
SH3RF3Q8TEJ3 NTF6A-201ENST00000591175 560 ntBASIC30.05■■■□□ 2.4
SH3RF3Q8TEJ3 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC30.05■■■□□ 2.4
SH3RF3Q8TEJ3 FAM149A-201ENST00000227065 2708 ntAPPRIS P2 TSL 1 (best) BASIC30.05■■■□□ 2.4
SH3RF3Q8TEJ3 COL13A1-214ENST00000522165 2061 ntAPPRIS ALT2 TSL 5 BASIC30.05■■■□□ 2.4
SH3RF3Q8TEJ3 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC30.05■■■□□ 2.4
SH3RF3Q8TEJ3 RTN4R-201ENST00000043402 2157 ntAPPRIS P2 TSL 1 (best) BASIC30.04■■■□□ 2.4
SH3RF3Q8TEJ3 WDSUB1-205ENST00000409990 1920 ntAPPRIS P1 TSL 2 BASIC30.04■■■□□ 2.4
SH3RF3Q8TEJ3 CLK2-201ENST00000355560 2120 ntAPPRIS ALT1 TSL 5 BASIC30.04■■■□□ 2.4
SH3RF3Q8TEJ3 SLC30A10-202ENST00000366926 1915 ntAPPRIS P1 TSL 1 (best) BASIC30.03■■■□□ 2.4
SH3RF3Q8TEJ3 ECEL1P2-201ENST00000461596 1295 ntBASIC30.03■■■□□ 2.4
SH3RF3Q8TEJ3 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC30.03■■■□□ 2.4
SH3RF3Q8TEJ3 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC30.03■■■□□ 2.4
SH3RF3Q8TEJ3 KANSL1L-207ENST00000452086 2334 ntTSL 1 (best) BASIC30.02■■■□□ 2.4
SH3RF3Q8TEJ3 PQLC1-202ENST00000357575 2475 ntAPPRIS ALT1 TSL 5 BASIC30.02■■■□□ 2.4
SH3RF3Q8TEJ3 NGB-201ENST00000298352 1884 ntAPPRIS P1 TSL 1 (best) BASIC30.02■■■□□ 2.4
SH3RF3Q8TEJ3 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC30.02■■■□□ 2.4
SH3RF3Q8TEJ3 TBCC-201ENST00000372876 1616 ntAPPRIS P1 BASIC30.02■■■□□ 2.4
SH3RF3Q8TEJ3 CERS2-205ENST00000368954 2505 ntAPPRIS P1 TSL 1 (best) BASIC30.02■■■□□ 2.4
SH3RF3Q8TEJ3 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC30.02■■■□□ 2.4
SH3RF3Q8TEJ3 GNAS-211ENST00000371095 1931 ntAPPRIS ALT1 TSL 1 (best) BASIC30.02■■■□□ 2.4
SH3RF3Q8TEJ3 KIAA2013-202ENST00000376576 2539 ntTSL 2 BASIC30.01■■■□□ 2.4
SH3RF3Q8TEJ3 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC30.01■■■□□ 2.39
SH3RF3Q8TEJ3 AC139426.1-201ENST00000568218 2529 ntBASIC30.01■■■□□ 2.39
SH3RF3Q8TEJ3 FAM78B-201ENST00000338353 1597 ntAPPRIS P1 TSL 1 (best) BASIC30.01■■■□□ 2.39
SH3RF3Q8TEJ3 GSX1-201ENST00000302945 1663 ntAPPRIS P1 TSL 1 (best) BASIC30.01■■■□□ 2.39
SH3RF3Q8TEJ3 HYI-213ENST00000583037 1322 ntTSL 5 BASIC30■■■□□ 2.39
SH3RF3Q8TEJ3 CUEDC1-201ENST00000360238 2193 ntAPPRIS P1 TSL 2 BASIC30■■■□□ 2.39
SH3RF3Q8TEJ3 AL359258.2-201ENST00000564063 1566 ntBASIC30■■■□□ 2.39
Retrieved 100 of 98,524 protein–RNA pairs in 19.3 ms