RNA–Protein interactions for RNA: YOR036W

PEP12, Transcript of Target membrane receptor (t-SNARE), yeastyeast

Gene PEP12, Length 867 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PEP12YOR036W CLA4P48562 842 aa6.93□□□□□ -1.3
PEP12YOR036W SEC2P17065 759 aa6.92□□□□□ -1.3
PEP12YOR036W NPL4P33755 580 aa6.89□□□□□ -1.31
PEP12YOR036W LAM6Q08001 693 aa6.89□□□□□ -1.31
PEP12YOR036W GCD11P32481 527 aaKnown RBP6.88□□□□□ -1.31
PEP12YOR036W MVP1P40959 511 aaKnown RBP6.88□□□□□ -1.31
PEP12YOR036W BRE2P43132 505 aa6.88□□□□□ -1.31
PEP12YOR036W YPL062WQ02781 134 aa6.87□□□□□ -1.31
PEP12YOR036W COX6P00427 148 aa6.86□□□□□ -1.31
PEP12YOR036W SPT16P32558 1035 aaKnown RBP6.86□□□□□ -1.31
PEP12YOR036W VPS70P47161 811 aa6.86□□□□□ -1.31
PEP12YOR036W FRK1Q03002 865 aaPredicted RBP6.84□□□□□ -1.31
PEP12YOR036W RGR1P19263 1082 aa6.83□□□□□ -1.32
PEP12YOR036W MAK21Q12176 1025 aaKnown RBP6.83□□□□□ -1.32
PEP12YOR036W RRN7P40992 514 aa6.82□□□□□ -1.32
PEP12YOR036W YPR109WQ06104 294 aa6.82□□□□□ -1.32
PEP12YOR036W BDP1P46678 594 aa6.81□□□□□ -1.32
PEP12YOR036W GCR2Q01722 534 aa6.79□□□□□ -1.32
PEP12YOR036W CDC4P07834 779 aa6.78□□□□□ -1.32
PEP12YOR036W GAR1P28007 205 aaKnown RBP6.78□□□□□ -1.32
PEP12YOR036W ERF2Q06551 359 aa6.78□□□□□ -1.32
PEP12YOR036W KEX2P13134 814 aa6.76□□□□□ -1.33
PEP12YOR036W PAT1P25644 796 aaKnown RBP6.73□□□□□ -1.33
PEP12YOR036W HED1Q03937 162 aa6.73□□□□□ -1.33
PEP12YOR036W GBP2P25555 427 aaKnown RBP RIP-Chip data6.71□□□□□ -1.34not detected
PEP12YOR036W MET22P32179 357 aa6.71□□□□□ -1.34
PEP12YOR036W PAC1P39946 494 aaKnown RBP6.71□□□□□ -1.34
PEP12YOR036W MOD5P07884 428 aa6.69□□□□□ -1.34
PEP12YOR036W AGE1Q04412 482 aa6.68□□□□□ -1.34
PEP12YOR036W ENV9Q08651 330 aa6.67□□□□□ -1.34
PEP12YOR036W MET32Q12041 191 aa6.67□□□□□ -1.34
PEP12YOR036W PBS2P08018 668 aa6.66□□□□□ -1.34
PEP12YOR036W PSE1P32337 1089 aaKnown RBP6.66□□□□□ -1.34
PEP12YOR036W TUB4P53378 473 aa6.64□□□□□ -1.35
PEP12YOR036W PUS5Q06244 254 aa6.64□□□□□ -1.35
PEP12YOR036W ASH1P34233 588 aa6.63□□□□□ -1.35
PEP12YOR036W YDR444WQ04093 687 aa6.62□□□□□ -1.35
PEP12YOR036W AFT1P22149 690 aa6.61□□□□□ -1.35
PEP12YOR036W CKB1P43639 278 aa6.61□□□□□ -1.35
PEP12YOR036W CLB5P30283 435 aa6.6□□□□□ -1.35
PEP12YOR036W RTF1P53064 558 aa6.59□□□□□ -1.35
PEP12YOR036W LCB5Q06147 687 aaKnown RBP6.58□□□□□ -1.36
PEP12YOR036W YDL176WQ12027 708 aa6.58□□□□□ -1.36
PEP12YOR036W HST3P53687 447 aa6.57□□□□□ -1.36
PEP12YOR036W YNL115CP53925 644 aa6.57□□□□□ -1.36
PEP12YOR036W MAM3Q12296 706 aa6.57□□□□□ -1.36
PEP12YOR036W SIT4P20604 311 aa6.55□□□□□ -1.36
PEP12YOR036W RRD1P40454 393 aaKnown RBP6.54□□□□□ -1.36
PEP12YOR036W IES2P40154 320 aa6.53□□□□□ -1.36
PEP12YOR036W YJR115WP47152 169 aa6.53□□□□□ -1.36
PEP12YOR036W DSF2P38213 736 aa6.52□□□□□ -1.37
PEP12YOR036W NIS1P53939 407 aa6.52□□□□□ -1.37
PEP12YOR036W TPD3P31383 635 aa6.51□□□□□ -1.37
PEP12YOR036W TEA1P47988 759 aa6.5□□□□□ -1.37
PEP12YOR036W NUP42P49686 430 aaKnown RBP6.5□□□□□ -1.37
PEP12YOR036W KXD1P53158 218 aa6.49□□□□□ -1.37
PEP12YOR036W PDC1P06169 563 aaKnown RBP6.48□□□□□ -1.37
PEP12YOR036W HXT10P43581 546 aa6.48□□□□□ -1.37
PEP12YOR036W MSB3P48566 633 aaPredicted RBP6.46□□□□□ -1.38
PEP12YOR036W SYH1Q02875 849 aaKnown RBP6.46□□□□□ -1.38
PEP12YOR036W DIT2P21595 489 aa6.44□□□□□ -1.38
PEP12YOR036W SAS10Q12136 610 aaPredicted RBP6.44□□□□□ -1.38
PEP12YOR036W SLY41P22215 453 aa6.43□□□□□ -1.38
PEP12YOR036W FPK1P53739 893 aa6.43□□□□□ -1.38
PEP12YOR036W PTK2P47116 818 aaKnown RBP6.4□□□□□ -1.38
PEP12YOR036W CAF120P53836 1060 aa6.4□□□□□ -1.38
PEP12YOR036W UGA3P26370 528 aa6.39□□□□□ -1.39
PEP12YOR036W RPA14P50106 137 aa6.39□□□□□ -1.39
PEP12YOR036W YDL206WQ12424 762 aa6.39□□□□□ -1.39
PEP12YOR036W ACO2P39533 789 aa6.38□□□□□ -1.39
PEP12YOR036W YMR196WQ04336 1088 aa6.38□□□□□ -1.39
PEP12YOR036W OPT2Q06593 877 aa6.38□□□□□ -1.39
PEP12YOR036W YPR097WQ06839 1073 aa6.38□□□□□ -1.39
PEP12YOR036W ALR1Q08269 859 aa6.38□□□□□ -1.39
PEP12YOR036W SCJ1P25303 377 aa6.37□□□□□ -1.39
PEP12YOR036W PUS6P53294 404 aa6.37□□□□□ -1.39
PEP12YOR036W KIP2P28743 706 aa6.36□□□□□ -1.39
PEP12YOR036W TRM1P15565 570 aaKnown RBP6.35□□□□□ -1.39
PEP12YOR036W MRT4P33201 236 aaKnown RBP6.35□□□□□ -1.39
PEP12YOR036W SPB4P25808 606 aaPredicted RBP6.34□□□□□ -1.39
PEP12YOR036W IXR1P33417 597 aa6.34□□□□□ -1.39
PEP12YOR036W TBF1Q02457 562 aa6.34□□□□□ -1.39
PEP12YOR036W SRF1Q12516 437 aa6.34□□□□□ -1.39
PEP12YOR036W HST2P53686 357 aa6.33□□□□□ -1.4
PEP12YOR036W GLY1P37303 387 aaKnown RBP6.31□□□□□ -1.4
PEP12YOR036W BUB1P41695 1021 aaKnown RBP RIP-Chip data6.31□□□□□ -1.4not detected
PEP12YOR036W NUP85P46673 744 aa6.31□□□□□ -1.4
PEP12YOR036W YLR346CQ06139 101 aa6.31□□□□□ -1.4
PEP12YOR036W DMA1P38823 416 aa6.3□□□□□ -1.4
PEP12YOR036W YIR007WP40566 764 aa6.3□□□□□ -1.4
PEP12YOR036W TYW1Q08960 810 aaKnown RBP6.29□□□□□ -1.4
PEP12YOR036W TY1A-BLQ12266 440 aa6.28□□□□□ -1.4
PEP12YOR036W MMP1Q12372 583 aa6.28□□□□□ -1.4
PEP12YOR036W SCW11P53189 542 aa6.27□□□□□ -1.41
PEP12YOR036W MIP1P15801 1254 aa6.26□□□□□ -1.41
PEP12YOR036W TRK2P28584 889 aa6.26□□□□□ -1.41
PEP12YOR036W YGR035CP53222 116 aa6.26□□□□□ -1.41
PEP12YOR036W ESS1P22696 170 aa6.25□□□□□ -1.41
PEP12YOR036W VAC17P25591 423 aa6.25□□□□□ -1.41
PEP12YOR036W RTT106P40161 455 aa6.25□□□□□ -1.41
Retrieved 100 of 5,963 RNA–protein pairs in 30.5 ms