RNA–Protein interactions for RNA: YNL093W

YPT53, Transcript of Stress-induced Rab family GTPase, yeastyeast

Gene YPT53, Length 663 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YPT53YNL093W REF2P42073 533 aaPredicted RBP6.23□□□□□ -1.41
YPT53YNL093W ERG12P07277 443 aa6.22□□□□□ -1.41
YPT53YNL093W GCD11P32481 527 aaKnown RBP6.22□□□□□ -1.41
YPT53YNL093W YPR148CQ06523 435 aa6.21□□□□□ -1.42
YPT53YNL093W LAM6Q08001 693 aa6.2□□□□□ -1.42
YPT53YNL093W IFH1P39520 1085 aa6.19□□□□□ -1.42
YPT53YNL093W YPL062WQ02781 134 aa6.19□□□□□ -1.42
YPT53YNL093W NPL4P33755 580 aa6.18□□□□□ -1.42
YPT53YNL093W MVP1P40959 511 aaKnown RBP6.18□□□□□ -1.42
YPT53YNL093W BRE2P43132 505 aa6.18□□□□□ -1.42
YPT53YNL093W LEO1P38439 464 aa6.17□□□□□ -1.42
YPT53YNL093W DMA1P38823 416 aa6.16□□□□□ -1.42
YPT53YNL093W VPS70P47161 811 aa6.16□□□□□ -1.42
YPT53YNL093W FRK1Q03002 865 aaPredicted RBP6.16□□□□□ -1.42
YPT53YNL093W YPR109WQ06104 294 aa6.16□□□□□ -1.42
YPT53YNL093W SPT16P32558 1035 aaKnown RBP6.15□□□□□ -1.42
YPT53YNL093W URN1Q06525 465 aaKnown RBP6.15□□□□□ -1.42
YPT53YNL093W COX6P00427 148 aa6.14□□□□□ -1.43
YPT53YNL093W RGR1P19263 1082 aa6.14□□□□□ -1.43
YPT53YNL093W GAR1P28007 205 aaKnown RBP6.14□□□□□ -1.43
YPT53YNL093W RRN7P40992 514 aa6.14□□□□□ -1.43
YPT53YNL093W ERF2Q06551 359 aa6.14□□□□□ -1.43
YPT53YNL093W BDP1P46678 594 aa6.13□□□□□ -1.43
YPT53YNL093W KEX2P13134 814 aa6.1□□□□□ -1.43
YPT53YNL093W CDC4P07834 779 aa6.09□□□□□ -1.43
YPT53YNL093W GCR2Q01722 534 aa6.09□□□□□ -1.43
YPT53YNL093W MET22P32179 357 aa6.07□□□□□ -1.44
YPT53YNL093W MAK21Q12176 1025 aaKnown RBP6.06□□□□□ -1.44
YPT53YNL093W GBP2P25555 427 aaKnown RBP RIP-Chip data6.04□□□□□ -1.44not detected
YPT53YNL093W PAC1P39946 494 aaKnown RBP6.04□□□□□ -1.44
YPT53YNL093W HED1Q03937 162 aa6.03□□□□□ -1.44
YPT53YNL093W MET32Q12041 191 aa6.02□□□□□ -1.45
YPT53YNL093W MOD5P07884 428 aa6.01□□□□□ -1.45
YPT53YNL093W PAT1P25644 796 aaKnown RBP6.01□□□□□ -1.45
YPT53YNL093W AGE1Q04412 482 aa6.01□□□□□ -1.45
YPT53YNL093W PUS5Q06244 254 aa6.01□□□□□ -1.45
YPT53YNL093W ASH1P34233 588 aa5.99□□□□□ -1.45
YPT53YNL093W ENV9Q08651 330 aa5.99□□□□□ -1.45
YPT53YNL093W TUB4P53378 473 aa5.98□□□□□ -1.45
YPT53YNL093W YDR444WQ04093 687 aa5.96□□□□□ -1.46
YPT53YNL093W PBS2P08018 668 aa5.95□□□□□ -1.46
YPT53YNL093W PSE1P32337 1089 aaKnown RBP5.94□□□□□ -1.46
YPT53YNL093W AIM44Q99299 758 aa5.94□□□□□ -1.46
YPT53YNL093W YDL176WQ12027 708 aa5.93□□□□□ -1.46
YPT53YNL093W AFT1P22149 690 aa5.92□□□□□ -1.46
YPT53YNL093W NAP1P25293 417 aaKnown RBP5.92□□□□□ -1.46
YPT53YNL093W LCB5Q06147 687 aaKnown RBP5.91□□□□□ -1.46
YPT53YNL093W YJR115WP47152 169 aa5.89□□□□□ -1.47
YPT53YNL093W HST3P53687 447 aa5.89□□□□□ -1.47
YPT53YNL093W YNL115CP53925 644 aa5.89□□□□□ -1.47
YPT53YNL093W RRD1P40454 393 aaKnown RBP5.88□□□□□ -1.47
YPT53YNL093W SIT4P20604 311 aa5.87□□□□□ -1.47
YPT53YNL093W CKB1P43639 278 aa5.86□□□□□ -1.47
YPT53YNL093W RTF1P53064 558 aa5.86□□□□□ -1.47
YPT53YNL093W CLB5P30283 435 aa5.85□□□□□ -1.47
YPT53YNL093W IES2P40154 320 aa5.85□□□□□ -1.47
YPT53YNL093W IOC4Q04213 475 aa5.85□□□□□ -1.47
YPT53YNL093W MAM3Q12296 706 aa5.85□□□□□ -1.47
YPT53YNL093W NIS1P53939 407 aa5.84□□□□□ -1.47
YPT53YNL093W NUP42P49686 430 aaKnown RBP5.83□□□□□ -1.48
YPT53YNL093W PDC1P06169 563 aaKnown RBP5.81□□□□□ -1.48
YPT53YNL093W HXT10P43581 546 aa5.81□□□□□ -1.48
YPT53YNL093W TEA1P47988 759 aa5.81□□□□□ -1.48
YPT53YNL093W KXD1P53158 218 aa5.81□□□□□ -1.48
YPT53YNL093W TPD3P31383 635 aa5.8□□□□□ -1.48
YPT53YNL093W YRB30P53107 440 aaPredicted RBP5.8□□□□□ -1.48
YPT53YNL093W DIT2P21595 489 aa5.79□□□□□ -1.48
YPT53YNL093W DSF2P38213 736 aa5.79□□□□□ -1.48
YPT53YNL093W SLY41P22215 453 aa5.77□□□□□ -1.49
YPT53YNL093W FPK1P53739 893 aa5.77□□□□□ -1.49
YPT53YNL093W CAF120P53836 1060 aa5.77□□□□□ -1.49
YPT53YNL093W SYH1Q02875 849 aaKnown RBP5.77□□□□□ -1.49
YPT53YNL093W SCJ1P25303 377 aa5.76□□□□□ -1.49
YPT53YNL093W MSB3P48566 633 aaPredicted RBP5.76□□□□□ -1.49
YPT53YNL093W ACO2P39533 789 aa5.75□□□□□ -1.49
YPT53YNL093W PTK2P47116 818 aaKnown RBP5.74□□□□□ -1.49
YPT53YNL093W OPT2Q06593 877 aa5.74□□□□□ -1.49
YPT53YNL093W UGA3P26370 528 aa5.73□□□□□ -1.49
YPT53YNL093W YDL206WQ12424 762 aa5.72□□□□□ -1.49
YPT53YNL093W SAS10Q12136 610 aaPredicted RBP5.71□□□□□ -1.5
YPT53YNL093W KIP2P28743 706 aa5.7□□□□□ -1.5
YPT53YNL093W RPA14P50106 137 aa5.7□□□□□ -1.5
YPT53YNL093W PUS6P53294 404 aa5.7□□□□□ -1.5
YPT53YNL093W YPR097WQ06839 1073 aa5.7□□□□□ -1.5
YPT53YNL093W MRT4P33201 236 aaKnown RBP5.69□□□□□ -1.5
YPT53YNL093W IXR1P33417 597 aa5.69□□□□□ -1.5
YPT53YNL093W YMR196WQ04336 1088 aa5.69□□□□□ -1.5
YPT53YNL093W TRM1P15565 570 aaKnown RBP5.68□□□□□ -1.5
YPT53YNL093W ALR1Q08269 859 aa5.68□□□□□ -1.5
YPT53YNL093W YIR007WP40566 764 aa5.67□□□□□ -1.5
YPT53YNL093W SRF1Q12516 437 aa5.67□□□□□ -1.5
YPT53YNL093W LEU3P08638 886 aa5.66□□□□□ -1.5
YPT53YNL093W SPB4P25808 606 aaPredicted RBP5.66□□□□□ -1.5
YPT53YNL093W TBF1Q02457 562 aa5.66□□□□□ -1.5
YPT53YNL093W ITT1Q04638 464 aa5.66□□□□□ -1.5
YPT53YNL093W GLY1P37303 387 aaKnown RBP5.65□□□□□ -1.5
YPT53YNL093W NUP85P46673 744 aa5.65□□□□□ -1.5
YPT53YNL093W HST2P53686 357 aa5.65□□□□□ -1.5
YPT53YNL093W DMA2P53924 522 aa5.65□□□□□ -1.5
YPT53YNL093W TRK2P28584 889 aa5.64□□□□□ -1.51
Retrieved 100 of 5,963 RNA–protein pairs in 10.6 ms