RNA–Protein interactions for RNA: YJR044C

VPS55, Transcript of Late endosomal protein involved in late endosome to vacuole transport, yeastyeast

Gene VPS55, Length 423 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS55YJR044C BRE2P43132 505 aa4.97□□□□□ -1.61
VPS55YJR044C YPL062WQ02781 134 aa4.97□□□□□ -1.61
VPS55YJR044C NPL4P33755 580 aa4.96□□□□□ -1.62
VPS55YJR044C REF2P42073 533 aaPredicted RBP4.96□□□□□ -1.62
VPS55YJR044C FRK1Q03002 865 aaPredicted RBP4.95□□□□□ -1.62
VPS55YJR044C LAM6Q08001 693 aa4.95□□□□□ -1.62
VPS55YJR044C GAR1P28007 205 aaKnown RBP4.94□□□□□ -1.62
VPS55YJR044C SPT16P32558 1035 aaKnown RBP4.94□□□□□ -1.62
VPS55YJR044C IFH1P39520 1085 aa4.94□□□□□ -1.62
VPS55YJR044C YPR148CQ06523 435 aa4.93□□□□□ -1.62
VPS55YJR044C RRN7P40992 514 aa4.92□□□□□ -1.62
VPS55YJR044C MVP1P40959 511 aaKnown RBP4.91□□□□□ -1.62
VPS55YJR044C BDP1P46678 594 aa4.91□□□□□ -1.62
VPS55YJR044C VPS70P47161 811 aa4.91□□□□□ -1.62
VPS55YJR044C YPR109WQ06104 294 aa4.9□□□□□ -1.63
VPS55YJR044C GBP2P25555 427 aaKnown RBP RIP-Chip data4.89□□□□□ -1.63not detected
VPS55YJR044C GCR2Q01722 534 aa4.89□□□□□ -1.63
VPS55YJR044C ERF2Q06551 359 aa4.89□□□□□ -1.63
VPS55YJR044C COX6P00427 148 aa4.87□□□□□ -1.63
VPS55YJR044C CDC4P07834 779 aa4.87□□□□□ -1.63
VPS55YJR044C KEX2P13134 814 aa4.87□□□□□ -1.63
VPS55YJR044C RGR1P19263 1082 aa4.87□□□□□ -1.63
VPS55YJR044C MET22P32179 357 aa4.84□□□□□ -1.63
VPS55YJR044C PAT1P25644 796 aaKnown RBP4.83□□□□□ -1.64
VPS55YJR044C MAK21Q12176 1025 aaKnown RBP4.83□□□□□ -1.64
VPS55YJR044C PAC1P39946 494 aaKnown RBP4.82□□□□□ -1.64
VPS55YJR044C HED1Q03937 162 aa4.82□□□□□ -1.64
VPS55YJR044C PUS5Q06244 254 aa4.8□□□□□ -1.64
VPS55YJR044C MET32Q12041 191 aa4.8□□□□□ -1.64
VPS55YJR044C ENV9Q08651 330 aa4.79□□□□□ -1.64
VPS55YJR044C ASH1P34233 588 aa4.78□□□□□ -1.64
VPS55YJR044C MOD5P07884 428 aa4.77□□□□□ -1.65
VPS55YJR044C YDR444WQ04093 687 aa4.77□□□□□ -1.65
VPS55YJR044C AGE1Q04412 482 aa4.77□□□□□ -1.65
VPS55YJR044C TUB4P53378 473 aa4.76□□□□□ -1.65
VPS55YJR044C PBS2P08018 668 aa4.73□□□□□ -1.65
VPS55YJR044C AFT1P22149 690 aa4.73□□□□□ -1.65
VPS55YJR044C HST3P53687 447 aa4.73□□□□□ -1.65
VPS55YJR044C YDL176WQ12027 708 aa4.73□□□□□ -1.65
VPS55YJR044C PSE1P32337 1089 aaKnown RBP4.72□□□□□ -1.65
VPS55YJR044C LCB5Q06147 687 aaKnown RBP4.72□□□□□ -1.65
VPS55YJR044C RRD1P40454 393 aaKnown RBP4.7□□□□□ -1.66
VPS55YJR044C YJR115WP47152 169 aa4.7□□□□□ -1.66
VPS55YJR044C YNL115CP53925 644 aa4.68□□□□□ -1.66
VPS55YJR044C CLB5P30283 435 aa4.67□□□□□ -1.66
VPS55YJR044C IES2P40154 320 aa4.67□□□□□ -1.66
VPS55YJR044C RTF1P53064 558 aa4.67□□□□□ -1.66
VPS55YJR044C MAM3Q12296 706 aa4.67□□□□□ -1.66
VPS55YJR044C SIT4P20604 311 aa4.65□□□□□ -1.67
VPS55YJR044C CKB1P43639 278 aa4.65□□□□□ -1.67
VPS55YJR044C KXD1P53158 218 aa4.65□□□□□ -1.67
VPS55YJR044C NIS1P53939 407 aa4.65□□□□□ -1.67
VPS55YJR044C PDC1P06169 563 aaKnown RBP4.63□□□□□ -1.67
VPS55YJR044C HXT10P43581 546 aa4.63□□□□□ -1.67
VPS55YJR044C TEA1P47988 759 aa4.63□□□□□ -1.67
VPS55YJR044C CAF120P53836 1060 aa4.63□□□□□ -1.67
VPS55YJR044C SYH1Q02875 849 aaKnown RBP4.62□□□□□ -1.67
VPS55YJR044C SLY41P22215 453 aa4.61□□□□□ -1.67
VPS55YJR044C TPD3P31383 635 aa4.61□□□□□ -1.67
VPS55YJR044C MSB3P48566 633 aaPredicted RBP4.61□□□□□ -1.67
VPS55YJR044C NUP42P49686 430 aaKnown RBP4.61□□□□□ -1.67
VPS55YJR044C DSF2P38213 736 aa4.6□□□□□ -1.67
VPS55YJR044C UGA3P26370 528 aa4.59□□□□□ -1.67
VPS55YJR044C PTK2P47116 818 aaKnown RBP4.59□□□□□ -1.67
VPS55YJR044C FPK1P53739 893 aa4.59□□□□□ -1.67
VPS55YJR044C OPT2Q06593 877 aa4.59□□□□□ -1.67
VPS55YJR044C DIT2P21595 489 aa4.58□□□□□ -1.68
VPS55YJR044C SCJ1P25303 377 aa4.57□□□□□ -1.68
VPS55YJR044C KIP2P28743 706 aa4.57□□□□□ -1.68
VPS55YJR044C YDL206WQ12424 762 aa4.57□□□□□ -1.68
VPS55YJR044C SRF1Q12516 437 aa4.57□□□□□ -1.68
VPS55YJR044C ACO2P39533 789 aa4.56□□□□□ -1.68
VPS55YJR044C YMR196WQ04336 1088 aa4.56□□□□□ -1.68
VPS55YJR044C IXR1P33417 597 aa4.55□□□□□ -1.68
VPS55YJR044C TBF1Q02457 562 aa4.55□□□□□ -1.68
VPS55YJR044C ALR1Q08269 859 aa4.55□□□□□ -1.68
VPS55YJR044C YIR007WP40566 764 aa4.54□□□□□ -1.68
VPS55YJR044C RPA14P50106 137 aa4.54□□□□□ -1.68
VPS55YJR044C TRM1P15565 570 aaKnown RBP4.53□□□□□ -1.68
VPS55YJR044C PUS6P53294 404 aa4.53□□□□□ -1.68
VPS55YJR044C YPR097WQ06839 1073 aa4.53□□□□□ -1.68
VPS55YJR044C TYW1Q08960 810 aaKnown RBP4.53□□□□□ -1.68
VPS55YJR044C YLR346CQ06139 101 aa4.52□□□□□ -1.69
VPS55YJR044C SPB4P25808 606 aaPredicted RBP4.51□□□□□ -1.69
VPS55YJR044C MRT4P33201 236 aaKnown RBP4.51□□□□□ -1.69
VPS55YJR044C YGR035CP53222 116 aa4.51□□□□□ -1.69
VPS55YJR044C ITT1Q04638 464 aa4.51□□□□□ -1.69
VPS55YJR044C TRK2P28584 889 aa4.5□□□□□ -1.69
VPS55YJR044C GLY1P37303 387 aaKnown RBP4.5□□□□□ -1.69
VPS55YJR044C NUP85P46673 744 aa4.5□□□□□ -1.69
VPS55YJR044C SCW11P53189 542 aa4.5□□□□□ -1.69
VPS55YJR044C HPF1Q05164 967 aa4.5□□□□□ -1.69
VPS55YJR044C SAS10Q12136 610 aaPredicted RBP4.5□□□□□ -1.69
VPS55YJR044C TY1A-BLQ12266 440 aa4.5□□□□□ -1.69
VPS55YJR044C MIP1P15801 1254 aa4.49□□□□□ -1.69
VPS55YJR044C MTC5Q03897 1148 aa4.49□□□□□ -1.69
VPS55YJR044C ESS1P22696 170 aa4.48□□□□□ -1.69
VPS55YJR044C HST2P53686 357 aa4.48□□□□□ -1.69
VPS55YJR044C MMP1Q12372 583 aa4.47□□□□□ -1.69
VPS55YJR044C YJU3P28321 313 aa4.46□□□□□ -1.7
Retrieved 100 of 5,963 RNA–protein pairs in 52.6 ms