RNA–Protein interactions for RNA: YIL135C

VHS2, Transcript of Regulator of septin dynamics, yeastyeast

Gene VHS2, Length 1,311 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VHS2YIL135C TY1A-ER2P0CX66 440 aa9.18□□□□□ -0.94
VHS2YIL135C TY1A-GR3P0CX67 440 aa9.18□□□□□ -0.94
VHS2YIL135C TY1A-LR1P0CX68 440 aa9.18□□□□□ -0.94
VHS2YIL135C TY1A-MR2P0CX69 440 aa9.18□□□□□ -0.94
VHS2YIL135C GBP2P25555 427 aaKnown RBP RIP-Chip data9.18□□□□□ -0.94not detected
VHS2YIL135C TY1A-JR2P47099 440 aa9.18□□□□□ -0.94
VHS2YIL135C TY1A-DR1Q03856 440 aa9.18□□□□□ -0.94
VHS2YIL135C TY1A-ML1Q04706 440 aaKnown RBP9.18□□□□□ -0.94
VHS2YIL135C TY1A-BRQ12217 440 aa9.18□□□□□ -0.94
VHS2YIL135C TY1A-NL2Q12470 440 aa9.18□□□□□ -0.94
VHS2YIL135C TY1A-GR2Q12485 440 aa9.18□□□□□ -0.94
VHS2YIL135C ORC6P38826 435 aa9.17□□□□□ -0.94
VHS2YIL135C FRK1Q03002 865 aaPredicted RBP9.16□□□□□ -0.94
VHS2YIL135C MVP1P40959 511 aaKnown RBP9.11□□□□□ -0.95
VHS2YIL135C CDC4P07834 779 aa9.1□□□□□ -0.95
VHS2YIL135C RRN7P40992 514 aa9.1□□□□□ -0.95
VHS2YIL135C YPR148CQ06523 435 aa9.1□□□□□ -0.95
VHS2YIL135C BDP1P46678 594 aa9.09□□□□□ -0.95
VHS2YIL135C YPR109WQ06104 294 aa9.07□□□□□ -0.96
VHS2YIL135C PAT1P25644 796 aaKnown RBP9.06□□□□□ -0.96
VHS2YIL135C COX6P00427 148 aa9.05□□□□□ -0.96
VHS2YIL135C MET22P32179 357 aa9.05□□□□□ -0.96
VHS2YIL135C RGR1P19263 1082 aa9.03□□□□□ -0.96
VHS2YIL135C HED1Q03937 162 aa9.02□□□□□ -0.97
VHS2YIL135C MAK21Q12176 1025 aaKnown RBP9.02□□□□□ -0.97
VHS2YIL135C DMA1P38823 416 aa9.01□□□□□ -0.97
VHS2YIL135C VPS70P47161 811 aa9.01□□□□□ -0.97
VHS2YIL135C ENV9Q08651 330 aa8.99□□□□□ -0.97
VHS2YIL135C KEX2P13134 814 aa8.97□□□□□ -0.97
VHS2YIL135C ERF2Q06551 359 aa8.96□□□□□ -0.98
VHS2YIL135C YDR444WQ04093 687 aa8.93□□□□□ -0.98
VHS2YIL135C ASH1P34233 588 aa8.91□□□□□ -0.98
VHS2YIL135C MET32Q12041 191 aa8.9□□□□□ -0.98
VHS2YIL135C PAC1P39946 494 aaKnown RBP8.89□□□□□ -0.99
VHS2YIL135C MOD5P07884 428 aa8.86□□□□□ -0.99
VHS2YIL135C HST3P53687 447 aa8.85□□□□□ -0.99
VHS2YIL135C AFT1P22149 690 aa8.84□□□□□ -0.99
VHS2YIL135C LCB5Q06147 687 aaKnown RBP8.84□□□□□ -0.99
VHS2YIL135C PUS5Q06244 254 aa8.84□□□□□ -0.99
VHS2YIL135C DNA2P38859 1522 aa8.84□□□□□ -0.99
VHS2YIL135C TUB4P53378 473 aa8.81□□□□□ -1
VHS2YIL135C AGE1Q04412 482 aa8.81□□□□□ -1
VHS2YIL135C YDL176WQ12027 708 aa8.81□□□□□ -1
VHS2YIL135C PSE1P32337 1089 aaKnown RBP8.78□□□□□ -1
VHS2YIL135C RRD1P40454 393 aaKnown RBP8.77□□□□□ -1.01
VHS2YIL135C YJR115WP47152 169 aa8.75□□□□□ -1.01
VHS2YIL135C PBS2P08018 668 aa8.74□□□□□ -1.01
VHS2YIL135C RQC2Q12532 1038 aaKnown RBP8.74□□□□□ -1.01
VHS2YIL135C CLB5P30283 435 aa8.73□□□□□ -1.01
VHS2YIL135C RTF1P53064 558 aa8.72□□□□□ -1.01
VHS2YIL135C YNL115CP53925 644 aa8.71□□□□□ -1.02
VHS2YIL135C SAS10Q12136 610 aaPredicted RBP8.69□□□□□ -1.02
VHS2YIL135C CKB1P43639 278 aa8.66□□□□□ -1.02
VHS2YIL135C KXD1P53158 218 aa8.66□□□□□ -1.02
VHS2YIL135C MSB3P48566 633 aaPredicted RBP8.64□□□□□ -1.03
VHS2YIL135C SIT4P20604 311 aa8.63□□□□□ -1.03
VHS2YIL135C TPD3P31383 635 aa8.62□□□□□ -1.03
VHS2YIL135C HXT10P43581 546 aa8.62□□□□□ -1.03
VHS2YIL135C SYH1Q02875 849 aaKnown RBP8.62□□□□□ -1.03
VHS2YIL135C MAM3Q12296 706 aa8.62□□□□□ -1.03
VHS2YIL135C CAF120P53836 1060 aa8.61□□□□□ -1.03
VHS2YIL135C TEA1P47988 759 aa8.59□□□□□ -1.03
VHS2YIL135C KOG1P38873 1557 aa8.59□□□□□ -1.03
VHS2YIL135C UGA3P26370 528 aa8.58□□□□□ -1.04
VHS2YIL135C PDC1P06169 563 aaKnown RBP8.57□□□□□ -1.04
VHS2YIL135C ACO2P39533 789 aa8.57□□□□□ -1.04
VHS2YIL135C NIS1P53939 407 aa8.57□□□□□ -1.04
VHS2YIL135C OPT2Q06593 877 aa8.55□□□□□ -1.04
VHS2YIL135C IES2P40154 320 aa8.54□□□□□ -1.04
VHS2YIL135C PTK2P47116 818 aaKnown RBP8.54□□□□□ -1.04
VHS2YIL135C SRF1Q12516 437 aa8.54□□□□□ -1.04
VHS2YIL135C SWR1Q05471 1514 aa8.54□□□□□ -1.04
VHS2YIL135C YLR346CQ06139 101 aa8.54□□□□□ -1.04
VHS2YIL135C SLY41P22215 453 aa8.53□□□□□ -1.04
VHS2YIL135C KIP2P28743 706 aa8.51□□□□□ -1.05
VHS2YIL135C MTC5Q03897 1148 aa8.51□□□□□ -1.05
VHS2YIL135C DSF2P38213 736 aa8.49□□□□□ -1.05
VHS2YIL135C NUP42P49686 430 aaKnown RBP8.49□□□□□ -1.05
VHS2YIL135C TRK2P28584 889 aa8.47□□□□□ -1.05
VHS2YIL135C IXR1P33417 597 aa8.47□□□□□ -1.05
VHS2YIL135C FPK1P53739 893 aa8.47□□□□□ -1.05
VHS2YIL135C ALR1Q08269 859 aa8.47□□□□□ -1.05
VHS2YIL135C RPA14P50106 137 aa8.46□□□□□ -1.06
VHS2YIL135C GLY1P37303 387 aaKnown RBP8.45□□□□□ -1.06
VHS2YIL135C NUP85P46673 744 aa8.45□□□□□ -1.06
VHS2YIL135C YGR035CP53222 116 aa8.45□□□□□ -1.06
VHS2YIL135C TBF1Q02457 562 aa8.45□□□□□ -1.06
VHS2YIL135C YMR196WQ04336 1088 aa8.45□□□□□ -1.06
VHS2YIL135C TYW1Q08960 810 aaKnown RBP8.45□□□□□ -1.06
VHS2YIL135C YDL206WQ12424 762 aa8.45□□□□□ -1.06
VHS2YIL135C SPB4P25808 606 aaPredicted RBP8.44□□□□□ -1.06
VHS2YIL135C PUS6P53294 404 aa8.44□□□□□ -1.06
VHS2YIL135C MRT4P33201 236 aaKnown RBP8.43□□□□□ -1.06
VHS2YIL135C YIR007WP40566 764 aa8.43□□□□□ -1.06
VHS2YIL135C YPR097WQ06839 1073 aa8.43□□□□□ -1.06
VHS2YIL135C DIT2P21595 489 aa8.41□□□□□ -1.06
VHS2YIL135C SCW11P53189 542 aa8.41□□□□□ -1.06
VHS2YIL135C SPA2P23201 1466 aaKnown RBP8.41□□□□□ -1.06
VHS2YIL135C HPF1Q05164 967 aa8.4□□□□□ -1.06
VHS2YIL135C MIP1P15801 1254 aa8.39□□□□□ -1.07
Retrieved 100 of 5,963 RNA–protein pairs in 64.1 ms