Protein–RNA interactions for Protein: Q9Y4B5

MTCL1, Microtubule cross-linking factor 1, humanhuman

Known RBP Predictions only

Length 1,905 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MTCL1Q9Y4B5 FBLL1-201ENST00000338333 1519 ntAPPRIS P1 BASIC36.5■■■■□ 3.43
MTCL1Q9Y4B5 SSSCA1-205ENST00000527920 806 ntTSL 3 BASIC35.93■■■■□ 3.34
MTCL1Q9Y4B5 PPP1CA-203ENST00000376745 1476 ntAPPRIS P1 TSL 1 (best) BASIC35.59■■■■□ 3.29
MTCL1Q9Y4B5 HRAS-203ENST00000397596 1100 ntAPPRIS P1 TSL 3 BASIC35.55■■■■□ 3.28
MTCL1Q9Y4B5 AES-202ENST00000327141 1608 ntAPPRIS P1 TSL 1 (best) BASIC35.33■■■■□ 3.25
MTCL1Q9Y4B5 CSNK1E-204ENST00000403904 1580 ntAPPRIS P1 TSL 5 BASIC35.29■■■■□ 3.24
MTCL1Q9Y4B5 TCF15-201ENST00000246080 1555 ntAPPRIS P1 TSL 1 (best) BASIC35.26■■■■□ 3.23
MTCL1Q9Y4B5 AL356512.1-201ENST00000607453 1739 ntBASIC35.06■■■■□ 3.2
MTCL1Q9Y4B5 ANKRD60-201ENST00000457363 1038 ntAPPRIS P1 TSL 5 BASIC34.52■■■■□ 3.12
MTCL1Q9Y4B5 PPP2CB-204ENST00000518564 691 ntTSL 3 BASIC34.37■■■■□ 3.09
MTCL1Q9Y4B5 TAF5L-202ENST00000366674 492 ntTSL 3 BASIC34.32■■■■□ 3.08
MTCL1Q9Y4B5 ZFYVE21-201ENST00000216602 1521 ntAPPRIS ALT2 TSL 2 BASIC34.31■■■■□ 3.08
MTCL1Q9Y4B5 PHF10-201ENST00000339209 1719 ntAPPRIS P4 TSL 1 (best) BASIC34.28■■■■□ 3.08
MTCL1Q9Y4B5 OLFM1-208ENST00000392991 1057 ntTSL 2 BASIC34.25■■■■□ 3.07
MTCL1Q9Y4B5 CACNG8-202ENST00000638874 1278 ntAPPRIS P2 TSL 1 (best) BASIC34.18■■■■□ 3.06
MTCL1Q9Y4B5 HES6-203ENST00000409160 1600 ntTSL 2 BASIC33.97■■■■□ 3.03
MTCL1Q9Y4B5 CDV3-203ENST00000431519 955 ntTSL 1 (best) BASIC33.96■■■■□ 3.03
MTCL1Q9Y4B5 MPND-201ENST00000262966 1567 ntAPPRIS P3 TSL 1 (best) BASIC33.93■■■■□ 3.02
MTCL1Q9Y4B5 GALR3-201ENST00000249041 1157 ntAPPRIS P1 TSL 1 (best) BASIC33.93■■■■□ 3.02
MTCL1Q9Y4B5 PRR5-217ENST00000617066 1726 ntTSL 5 BASIC33.64■■■□□ 2.98
MTCL1Q9Y4B5 PTF1A-201ENST00000376504 1537 ntAPPRIS P1 TSL 1 (best) BASIC33.63■■■□□ 2.97
MTCL1Q9Y4B5 ALYREF-202ENST00000505490 1088 ntAPPRIS P1 TSL 1 (best) BASIC33.63■■■□□ 2.97
MTCL1Q9Y4B5 PRR5-216ENST00000611394 1843 ntTSL 2 BASIC33.47■■■□□ 2.95
MTCL1Q9Y4B5 GIPC1-205ENST00000586027 1386 ntAPPRIS P1 TSL 2 BASIC33.44■■■□□ 2.94
MTCL1Q9Y4B5 CMTM4-202ENST00000394106 1187 ntAPPRIS P1 TSL 1 (best) BASIC33.42■■■□□ 2.94
MTCL1Q9Y4B5 CMTM4-204ENST00000563952 1023 ntTSL 1 (best) BASIC33.42■■■□□ 2.94
MTCL1Q9Y4B5 INO80B-201ENST00000233331 1261 ntAPPRIS P1 TSL 1 (best) BASIC33.26■■■□□ 2.92
MTCL1Q9Y4B5 AL357033.3-201ENST00000620143 614 ntTSL 3 BASIC33.22■■■□□ 2.91
MTCL1Q9Y4B5 FAM89B-203ENST00000530349 1263 ntAPPRIS P1 TSL 2 BASIC33.13■■■□□ 2.89
MTCL1Q9Y4B5 INO80B-203ENST00000409917 796 ntTSL 2 BASIC33.04■■■□□ 2.88
MTCL1Q9Y4B5 CYBA-201ENST00000261623 797 ntAPPRIS P1 TSL 1 (best) BASIC33.01■■■□□ 2.88
MTCL1Q9Y4B5 MAF-203ENST00000569649 1217 ntAPPRIS ALT2 TSL 5 BASIC32.94■■■□□ 2.86
MTCL1Q9Y4B5 AC006077.2-201ENST00000623591 457 ntBASIC32.87■■■□□ 2.85
MTCL1Q9Y4B5 AC015813.7-201ENST00000623294 581 ntBASIC32.75■■■□□ 2.83
MTCL1Q9Y4B5 SATB1-AS1-216ENST00000598149 1119 ntTSL 2 BASIC32.74■■■□□ 2.83
MTCL1Q9Y4B5 SLC25A28-201ENST00000370495 1451 ntAPPRIS P1 TSL 1 (best) BASIC32.74■■■□□ 2.83
MTCL1Q9Y4B5 AC008738.5-201ENST00000587312 482 ntTSL 3 BASIC32.69■■■□□ 2.82
MTCL1Q9Y4B5 ZNRF2P1-201ENST00000441407 443 ntBASIC32.67■■■□□ 2.82
MTCL1Q9Y4B5 CSNK1E-206ENST00000413574 1631 ntTSL 5 BASIC32.67■■■□□ 2.82
MTCL1Q9Y4B5 NT5DC2-203ENST00000459839 1639 ntTSL 1 (best) BASIC32.54■■■□□ 2.8
MTCL1Q9Y4B5 CAPNS1-206ENST00000588815 1471 ntAPPRIS P2 TSL 1 (best) BASIC32.52■■■□□ 2.8
MTCL1Q9Y4B5 NECTIN3-201ENST00000319792 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC32.52■■■□□ 2.8
MTCL1Q9Y4B5 SEPT3-204ENST00000406029 1866 ntTSL 5 BASIC32.51■■■□□ 2.79
MTCL1Q9Y4B5 C11orf68-202ENST00000449692 1559 ntAPPRIS P3 TSL 1 (best) BASIC32.36■■■□□ 2.77
MTCL1Q9Y4B5 UBE2M-201ENST00000253023 1508 ntAPPRIS P1 TSL 1 (best) BASIC32.31■■■□□ 2.76
MTCL1Q9Y4B5 PRELID2-202ENST00000394450 1102 ntTSL 1 (best) BASIC32.25■■■□□ 2.75
MTCL1Q9Y4B5 FAM89B-202ENST00000449319 1337 ntTSL 1 (best) BASIC32.15■■■□□ 2.74
MTCL1Q9Y4B5 ARTN-201ENST00000372354 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC32.11■■■□□ 2.73
MTCL1Q9Y4B5 AP002365.1-201ENST00000603448 772 ntBASIC32.11■■■□□ 2.73
MTCL1Q9Y4B5 NKAIN4-203ENST00000370316 1430 ntAPPRIS P1 TSL 1 (best) BASIC32.08■■■□□ 2.73
MTCL1Q9Y4B5 HAGHL-201ENST00000341413 1701 ntTSL 2 BASIC32.08■■■□□ 2.73
MTCL1Q9Y4B5 FAM58A-202ENST00000440428 1164 ntAPPRIS P2 TSL 2 BASIC31.83■■■□□ 2.69
MTCL1Q9Y4B5 METRNL-201ENST00000320095 1605 ntAPPRIS P1 TSL 1 (best) BASIC31.78■■■□□ 2.68
MTCL1Q9Y4B5 FGF2-203ENST00000614010 867 ntTSL 1 (best) BASIC31.73■■■□□ 2.67
MTCL1Q9Y4B5 AC079848.1-201ENST00000511301 327 ntTSL 3 BASIC31.71■■■□□ 2.67
MTCL1Q9Y4B5 HOXB3-208ENST00000476342 1420 ntAPPRIS P1 TSL 1 (best) BASIC31.69■■■□□ 2.66
MTCL1Q9Y4B5 AC005524.1-203ENST00000586528 451 ntTSL 3 BASIC31.68■■■□□ 2.66
MTCL1Q9Y4B5 NRGN-201ENST00000284292 1306 ntAPPRIS P1 TSL 1 (best) BASIC31.68■■■□□ 2.66
MTCL1Q9Y4B5 SYNGR1-202ENST00000318801 1361 ntTSL 1 (best) BASIC31.67■■■□□ 2.66
MTCL1Q9Y4B5 H2AFV-202ENST00000308153 752 ntAPPRIS P4 TSL 1 (best) BASIC31.67■■■□□ 2.66
MTCL1Q9Y4B5 LINC01578-201ENST00000553829 732 ntTSL 2 BASIC31.67■■■□□ 2.66
MTCL1Q9Y4B5 RAN-202ENST00000392369 1530 ntAPPRIS P1 TSL 1 (best) BASIC31.65■■■□□ 2.66
MTCL1Q9Y4B5 AL355297.4-201ENST00000603191 1249 ntTSL 3 BASIC31.61■■■□□ 2.65
MTCL1Q9Y4B5 PQLC1-211ENST00000590381 1247 ntTSL 2 BASIC31.6■■■□□ 2.65
MTCL1Q9Y4B5 LIMCH1-211ENST00000509638 1570 ntTSL 1 (best) BASIC31.59■■■□□ 2.65
MTCL1Q9Y4B5 ARTN-211ENST00000498139 1303 ntAPPRIS P4 TSL 1 (best) BASIC31.55■■■□□ 2.64
MTCL1Q9Y4B5 FAM149A-215ENST00000514153 2070 ntAPPRIS P2 TSL 5 BASIC31.55■■■□□ 2.64
MTCL1Q9Y4B5 NT5M-207ENST00000616989 1635 ntTSL 1 (best) BASIC31.54■■■□□ 2.64
MTCL1Q9Y4B5 CLEC3B-201ENST00000296130 936 ntAPPRIS P1 TSL 1 (best) BASIC31.51■■■□□ 2.64
MTCL1Q9Y4B5 HMGB1-205ENST00000399494 1282 ntAPPRIS P1 TSL 2 BASIC31.48■■■□□ 2.63
MTCL1Q9Y4B5 FAM149A-205ENST00000502970 1990 ntAPPRIS P2 TSL 5 BASIC31.45■■■□□ 2.63
MTCL1Q9Y4B5 CYHR1-209ENST00000530374 1870 ntTSL 3 BASIC31.45■■■□□ 2.63
MTCL1Q9Y4B5 MBD2-202ENST00000398398 1237 ntTSL 2 BASIC31.45■■■□□ 2.62
MTCL1Q9Y4B5 MAP6D1-202ENST00000431348 890 ntAPPRIS ALT2 TSL 2 BASIC31.45■■■□□ 2.62
MTCL1Q9Y4B5 MBD2-205ENST00000583046 1182 ntTSL 1 (best) BASIC31.45■■■□□ 2.62
MTCL1Q9Y4B5 CCM2-219ENST00000544363 1620 ntTSL 3 BASIC31.45■■■□□ 2.62
MTCL1Q9Y4B5 MSANTD3-203ENST00000395067 1362 ntAPPRIS P1 TSL 1 (best) BASIC31.41■■■□□ 2.62
MTCL1Q9Y4B5 CHCHD4-202ENST00000396914 1405 ntAPPRIS P1 TSL 1 (best) BASIC31.41■■■□□ 2.62
MTCL1Q9Y4B5 MPND-207ENST00000599840 1611 ntAPPRIS ALT2 TSL 5 BASIC31.4■■■□□ 2.62
MTCL1Q9Y4B5 NKX1-1-201ENST00000422806 1236 ntAPPRIS P1 TSL 5 BASIC31.39■■■□□ 2.62
MTCL1Q9Y4B5 NT5DC2-202ENST00000422318 1795 ntAPPRIS ALT2 TSL 5 BASIC31.36■■■□□ 2.61
MTCL1Q9Y4B5 CBX4-202ENST00000448310 718 ntAPPRIS ALT2 TSL 3 BASIC31.32■■■□□ 2.6
MTCL1Q9Y4B5 PWWP2B-202ENST00000631148 2013 ntTSL 5 BASIC31.31■■■□□ 2.6
MTCL1Q9Y4B5 GSTZ1-201ENST00000216465 1338 ntAPPRIS P2 TSL 1 (best) BASIC31.31■■■□□ 2.6
MTCL1Q9Y4B5 ECHS1-201ENST00000368547 1617 ntAPPRIS P1 TSL 1 (best) BASIC31.31■■■□□ 2.6
MTCL1Q9Y4B5 AGTRAP-204ENST00000376637 1067 ntTSL 2 BASIC31.31■■■□□ 2.6
MTCL1Q9Y4B5 AL136373.1-201ENST00000634804 1449 ntAPPRIS P1 BASIC31.27■■■□□ 2.6
MTCL1Q9Y4B5 HRH3-201ENST00000317393 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC31.26■■■□□ 2.59
MTCL1Q9Y4B5 SAP30-201ENST00000296504 1108 ntAPPRIS P1 TSL 1 (best) BASIC31.24■■■□□ 2.59
MTCL1Q9Y4B5 DYNLL1-207ENST00000549989 719 ntAPPRIS P1 TSL 1 (best) BASIC31.2■■■□□ 2.58
MTCL1Q9Y4B5 DYNLL1-208ENST00000550178 581 ntBASIC31.2■■■□□ 2.58
MTCL1Q9Y4B5 PLPP2-203ENST00000434325 1383 ntAPPRIS P1 TSL 1 (best) BASIC31.19■■■□□ 2.58
MTCL1Q9Y4B5 AP001107.7-201ENST00000533287 272 ntTSL 2 BASIC31.16■■■□□ 2.58
MTCL1Q9Y4B5 ANAPC11-203ENST00000392376 687 ntAPPRIS P1 TSL 1 (best) BASIC31.14■■■□□ 2.58
MTCL1Q9Y4B5 LINC01578-203ENST00000554669 578 ntTSL 5 BASIC31.06■■■□□ 2.56
MTCL1Q9Y4B5 ZNF358-202ENST00000597229 1954 ntAPPRIS P1 TSL 2 BASIC31.05■■■□□ 2.56
MTCL1Q9Y4B5 ANKRD65-203ENST00000454272 1506 ntAPPRIS P1 TSL 5 BASIC31.03■■■□□ 2.56
MTCL1Q9Y4B5 C11orf68-201ENST00000438576 1619 ntAPPRIS ALT2 TSL 2 BASIC30.97■■■□□ 2.55
MTCL1Q9Y4B5 NRGN-202ENST00000412681 1106 ntAPPRIS P1 TSL 1 (best) BASIC30.96■■■□□ 2.55
MTCL1Q9Y4B5 INAFM1-201ENST00000552360 1255 ntAPPRIS P1 BASIC30.93■■■□□ 2.54
Retrieved 100 of 98,524 protein–RNA pairs in 13.1 ms