Protein–RNA interactions for Protein: Q9H251

CDH23, Cadherin-23, humanhuman

Predictions only

Length 3,354 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH23Q9H251 SSSCA1-205ENST00000527920 806 ntTSL 3 BASIC37.59■■■■□ 3.61
CDH23Q9H251 HRAS-203ENST00000397596 1100 ntAPPRIS P1 TSL 3 BASIC37.23■■■■□ 3.55
CDH23Q9H251 FBLL1-201ENST00000338333 1519 ntAPPRIS P1 BASIC37.12■■■■□ 3.53
CDH23Q9H251 PPP1CA-203ENST00000376745 1476 ntAPPRIS P1 TSL 1 (best) BASIC36.45■■■■□ 3.43
CDH23Q9H251 CACNG8-202ENST00000638874 1278 ntAPPRIS P2 TSL 1 (best) BASIC36.14■■■■□ 3.38
CDH23Q9H251 ALYREF-202ENST00000505490 1088 ntAPPRIS P1 TSL 1 (best) BASIC36.09■■■■□ 3.37
CDH23Q9H251 CDV3-203ENST00000431519 955 ntTSL 1 (best) BASIC36■■■■□ 3.35
CDH23Q9H251 AES-202ENST00000327141 1608 ntAPPRIS P1 TSL 1 (best) BASIC36■■■■□ 3.35
CDH23Q9H251 PPP2CB-204ENST00000518564 691 ntTSL 3 BASIC35.84■■■■□ 3.33
CDH23Q9H251 CSNK1E-204ENST00000403904 1580 ntAPPRIS P1 TSL 5 BASIC35.75■■■■□ 3.31
CDH23Q9H251 ANKRD60-201ENST00000457363 1038 ntAPPRIS P1 TSL 5 BASIC35.75■■■■□ 3.31
CDH23Q9H251 GALR3-201ENST00000249041 1157 ntAPPRIS P1 TSL 1 (best) BASIC35.58■■■■□ 3.29
CDH23Q9H251 MAF-203ENST00000569649 1217 ntAPPRIS ALT2 TSL 5 BASIC35.47■■■■□ 3.27
CDH23Q9H251 TAF5L-202ENST00000366674 492 ntTSL 3 BASIC35.42■■■■□ 3.26
CDH23Q9H251 OLFM1-208ENST00000392991 1057 ntTSL 2 BASIC35.3■■■■□ 3.24
CDH23Q9H251 TCF15-201ENST00000246080 1555 ntAPPRIS P1 TSL 1 (best) BASIC35.27■■■■□ 3.24
CDH23Q9H251 AL356512.1-201ENST00000607453 1739 ntBASIC35.23■■■■□ 3.23
CDH23Q9H251 CYBA-201ENST00000261623 797 ntAPPRIS P1 TSL 1 (best) BASIC35.07■■■■□ 3.2
CDH23Q9H251 MPND-201ENST00000262966 1567 ntAPPRIS P3 TSL 1 (best) BASIC34.8■■■■□ 3.16
CDH23Q9H251 ZFYVE21-201ENST00000216602 1521 ntAPPRIS ALT2 TSL 2 BASIC34.78■■■■□ 3.16
CDH23Q9H251 ZNRF2P1-201ENST00000441407 443 ntBASIC34.6■■■■□ 3.13
CDH23Q9H251 AC006077.2-201ENST00000623591 457 ntBASIC34.6■■■■□ 3.13
CDH23Q9H251 CMTM4-202ENST00000394106 1187 ntAPPRIS P1 TSL 1 (best) BASIC34.58■■■■□ 3.13
CDH23Q9H251 CMTM4-204ENST00000563952 1023 ntTSL 1 (best) BASIC34.58■■■■□ 3.13
CDH23Q9H251 AL357033.3-201ENST00000620143 614 ntTSL 3 BASIC34.52■■■■□ 3.12
CDH23Q9H251 FAM89B-203ENST00000530349 1263 ntAPPRIS P1 TSL 2 BASIC34.49■■■■□ 3.11
CDH23Q9H251 PHF10-201ENST00000339209 1719 ntAPPRIS P4 TSL 1 (best) BASIC34.48■■■■□ 3.11
CDH23Q9H251 INO80B-203ENST00000409917 796 ntTSL 2 BASIC34.48■■■■□ 3.11
CDH23Q9H251 INO80B-201ENST00000233331 1261 ntAPPRIS P1 TSL 1 (best) BASIC34.45■■■■□ 3.1
CDH23Q9H251 ARTN-201ENST00000372354 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC34.37■■■■□ 3.09
CDH23Q9H251 AC008738.5-201ENST00000587312 482 ntTSL 3 BASIC34.32■■■■□ 3.08
CDH23Q9H251 GIPC1-205ENST00000586027 1386 ntAPPRIS P1 TSL 2 BASIC34.15■■■■□ 3.06
CDH23Q9H251 SATB1-AS1-216ENST00000598149 1119 ntTSL 2 BASIC33.85■■■■□ 3.01
CDH23Q9H251 PRELID2-202ENST00000394450 1102 ntTSL 1 (best) BASIC33.8■■■■□ 3
CDH23Q9H251 AC015813.7-201ENST00000623294 581 ntBASIC33.77■■■■□ 3
CDH23Q9H251 AP002365.1-201ENST00000603448 772 ntBASIC33.72■■■□□ 2.99
CDH23Q9H251 HMGB1-205ENST00000399494 1282 ntAPPRIS P1 TSL 2 BASIC33.66■■■□□ 2.98
CDH23Q9H251 H2AFV-202ENST00000308153 752 ntAPPRIS P4 TSL 1 (best) BASIC33.58■■■□□ 2.97
CDH23Q9H251 FAM58A-202ENST00000440428 1164 ntAPPRIS P2 TSL 2 BASIC33.51■■■□□ 2.96
CDH23Q9H251 ARTN-211ENST00000498139 1303 ntAPPRIS P4 TSL 1 (best) BASIC33.51■■■□□ 2.95
CDH23Q9H251 PTF1A-201ENST00000376504 1537 ntAPPRIS P1 TSL 1 (best) BASIC33.49■■■□□ 2.95
CDH23Q9H251 MBD2-202ENST00000398398 1237 ntTSL 2 BASIC33.43■■■□□ 2.94
CDH23Q9H251 MBD2-205ENST00000583046 1182 ntTSL 1 (best) BASIC33.43■■■□□ 2.94
CDH23Q9H251 HES6-203ENST00000409160 1600 ntTSL 2 BASIC33.37■■■□□ 2.93
CDH23Q9H251 PRR5-217ENST00000617066 1726 ntTSL 5 BASIC33.31■■■□□ 2.92
CDH23Q9H251 CSNK1E-206ENST00000413574 1631 ntTSL 5 BASIC33.31■■■□□ 2.92
CDH23Q9H251 AL355297.4-201ENST00000603191 1249 ntTSL 3 BASIC33.27■■■□□ 2.92
CDH23Q9H251 NKX1-1-201ENST00000422806 1236 ntAPPRIS P1 TSL 5 BASIC33.25■■■□□ 2.91
CDH23Q9H251 CBX4-202ENST00000448310 718 ntAPPRIS ALT2 TSL 3 BASIC33.24■■■□□ 2.91
CDH23Q9H251 FAM89B-202ENST00000449319 1337 ntTSL 1 (best) BASIC33.24■■■□□ 2.91
CDH23Q9H251 INAFM1-201ENST00000552360 1255 ntAPPRIS P1 BASIC33.21■■■□□ 2.91
CDH23Q9H251 ARTN-204ENST00000438616 889 ntTSL 1 (best) BASIC33.2■■■□□ 2.91
CDH23Q9H251 CLEC3B-201ENST00000296130 936 ntAPPRIS P1 TSL 1 (best) BASIC33.16■■■□□ 2.9
CDH23Q9H251 HAGHL-201ENST00000341413 1701 ntTSL 2 BASIC33.11■■■□□ 2.89
CDH23Q9H251 AC079848.1-201ENST00000511301 327 ntTSL 3 BASIC33.11■■■□□ 2.89
CDH23Q9H251 SLC25A28-201ENST00000370495 1451 ntAPPRIS P1 TSL 1 (best) BASIC33.09■■■□□ 2.89
CDH23Q9H251 AC005524.1-203ENST00000586528 451 ntTSL 3 BASIC33.07■■■□□ 2.89
CDH23Q9H251 PRR5-216ENST00000611394 1843 ntTSL 2 BASIC33.07■■■□□ 2.88
CDH23Q9H251 C11orf68-202ENST00000449692 1559 ntAPPRIS P3 TSL 1 (best) BASIC33.03■■■□□ 2.88
CDH23Q9H251 MSANTD3-203ENST00000395067 1362 ntAPPRIS P1 TSL 1 (best) BASIC33.02■■■□□ 2.88
CDH23Q9H251 MAP6D1-202ENST00000431348 890 ntAPPRIS ALT2 TSL 2 BASIC32.95■■■□□ 2.86
CDH23Q9H251 PQLC1-211ENST00000590381 1247 ntTSL 2 BASIC32.85■■■□□ 2.85
CDH23Q9H251 FGF2-203ENST00000614010 867 ntTSL 1 (best) BASIC32.8■■■□□ 2.84
CDH23Q9H251 NRGN-201ENST00000284292 1306 ntAPPRIS P1 TSL 1 (best) BASIC32.8■■■□□ 2.84
CDH23Q9H251 UBALD2-203ENST00000589240 660 ntTSL 2 BASIC32.78■■■□□ 2.84
CDH23Q9H251 HRH3-201ENST00000317393 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC32.75■■■□□ 2.83
CDH23Q9H251 LINC01578-201ENST00000553829 732 ntTSL 2 BASIC32.75■■■□□ 2.83
CDH23Q9H251 CAPNS1-217ENST00000629983 799 ntTSL 5 BASIC32.75■■■□□ 2.83
CDH23Q9H251 SYNGR1-202ENST00000318801 1361 ntTSL 1 (best) BASIC32.7■■■□□ 2.82
CDH23Q9H251 MZT2B-202ENST00000409255 769 ntAPPRIS ALT2 TSL 5 BASIC32.67■■■□□ 2.82
CDH23Q9H251 MACROD1-201ENST00000255681 1205 ntAPPRIS P1 TSL 1 (best) BASIC32.66■■■□□ 2.82
CDH23Q9H251 NT5DC2-203ENST00000459839 1639 ntTSL 1 (best) BASIC32.64■■■□□ 2.82
CDH23Q9H251 MARCH2-202ENST00000381035 1192 ntTSL 5 BASIC32.62■■■□□ 2.81
CDH23Q9H251 PARD6A-202ENST00000458121 1260 ntAPPRIS ALT1 TSL 1 (best) BASIC32.62■■■□□ 2.81
CDH23Q9H251 GSTZ1-201ENST00000216465 1338 ntAPPRIS P2 TSL 1 (best) BASIC32.61■■■□□ 2.81
CDH23Q9H251 UBE2M-201ENST00000253023 1508 ntAPPRIS P1 TSL 1 (best) BASIC32.61■■■□□ 2.81
CDH23Q9H251 DYNLL1-207ENST00000549989 719 ntAPPRIS P1 TSL 1 (best) BASIC32.58■■■□□ 2.81
CDH23Q9H251 DYNLL1-208ENST00000550178 581 ntBASIC32.58■■■□□ 2.81
CDH23Q9H251 ANAPC11-203ENST00000392376 687 ntAPPRIS P1 TSL 1 (best) BASIC32.57■■■□□ 2.8
CDH23Q9H251 CACNG6-202ENST00000346968 645 ntTSL 5 BASIC32.57■■■□□ 2.8
CDH23Q9H251 AP001107.7-201ENST00000533287 272 ntTSL 2 BASIC32.56■■■□□ 2.8
CDH23Q9H251 METRNL-201ENST00000320095 1605 ntAPPRIS P1 TSL 1 (best) BASIC32.53■■■□□ 2.8
CDH23Q9H251 HOXB3-211ENST00000490677 1109 ntTSL 1 (best) BASIC32.52■■■□□ 2.8
CDH23Q9H251 SAP30-201ENST00000296504 1108 ntAPPRIS P1 TSL 1 (best) BASIC32.49■■■□□ 2.79
CDH23Q9H251 LFNG-203ENST00000359574 1377 ntAPPRIS ALT1 TSL 1 (best) BASIC32.49■■■□□ 2.79
CDH23Q9H251 ADNP-AS1-201ENST00000558899 927 ntTSL 3 BASIC32.47■■■□□ 2.79
CDH23Q9H251 LINC01089-207ENST00000538335 630 ntTSL 3 BASIC32.47■■■□□ 2.79
CDH23Q9H251 LINC01578-203ENST00000554669 578 ntTSL 5 BASIC32.46■■■□□ 2.79
CDH23Q9H251 AL133346.1-201ENST00000435287 495 ntTSL 2 BASIC32.46■■■□□ 2.79
CDH23Q9H251 CDK2AP1-203ENST00000535979 1281 ntTSL 3 BASIC32.43■■■□□ 2.78
CDH23Q9H251 NRGN-202ENST00000412681 1106 ntAPPRIS P1 TSL 1 (best) BASIC32.34■■■□□ 2.77
CDH23Q9H251 LY6K-203ENST00000519387 963 ntAPPRIS ALT2 TSL 2 BASIC32.34■■■□□ 2.77
CDH23Q9H251 PDCD2-215ENST00000614056 1287 ntTSL 2 BASIC32.33■■■□□ 2.77
CDH23Q9H251 RAN-202ENST00000392369 1530 ntAPPRIS P1 TSL 1 (best) BASIC32.29■■■□□ 2.76
CDH23Q9H251 HOXB3-208ENST00000476342 1420 ntAPPRIS P1 TSL 1 (best) BASIC32.25■■■□□ 2.75
CDH23Q9H251 AL360182.2-201ENST00000451656 470 ntTSL 3 BASIC32.24■■■□□ 2.75
CDH23Q9H251 LINC01578-204ENST00000554894 556 ntTSL 3 BASIC32.24■■■□□ 2.75
CDH23Q9H251 LINC01578-207ENST00000556895 802 ntTSL 2 BASIC32.24■■■□□ 2.75
CDH23Q9H251 AC136428.2-201ENST00000563187 214 ntBASIC32.23■■■□□ 2.75
CDH23Q9H251 RPS2P35-201ENST00000443417 897 ntBASIC32.2■■■□□ 2.75
Retrieved 100 of 98,524 protein–RNA pairs in 14.6 ms