Protein–RNA interactions for Protein: Q9BZA8

PCDH11Y, Protocadherin-11 Y-linked, humanhuman

Predictions only

Length 1,340 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH11YQ9BZA8 FBLL1-201ENST00000338333 1519 ntAPPRIS P1 BASIC45.7■■■■■ 4.91
PCDH11YQ9BZA8 SSSCA1-205ENST00000527920 806 ntTSL 3 BASIC45.17■■■■■ 4.82
PCDH11YQ9BZA8 PPP1CA-203ENST00000376745 1476 ntAPPRIS P1 TSL 1 (best) BASIC44.54■■■■■ 4.72
PCDH11YQ9BZA8 HRAS-203ENST00000397596 1100 ntAPPRIS P1 TSL 3 BASIC44.49■■■■■ 4.71
PCDH11YQ9BZA8 AES-202ENST00000327141 1608 ntAPPRIS P1 TSL 1 (best) BASIC44.2■■■■■ 4.67
PCDH11YQ9BZA8 CSNK1E-204ENST00000403904 1580 ntAPPRIS P1 TSL 5 BASIC43.97■■■■■ 4.63
PCDH11YQ9BZA8 TCF15-201ENST00000246080 1555 ntAPPRIS P1 TSL 1 (best) BASIC43.89■■■■■ 4.62
PCDH11YQ9BZA8 AL356512.1-201ENST00000607453 1739 ntBASIC43.66■■■■■ 4.58
PCDH11YQ9BZA8 ANKRD60-201ENST00000457363 1038 ntAPPRIS P1 TSL 5 BASIC43.23■■■■■ 4.51
PCDH11YQ9BZA8 PPP2CB-204ENST00000518564 691 ntTSL 3 BASIC43.07■■■■■ 4.49
PCDH11YQ9BZA8 OLFM1-208ENST00000392991 1057 ntTSL 2 BASIC42.94■■■■■ 4.46
PCDH11YQ9BZA8 TAF5L-202ENST00000366674 492 ntTSL 3 BASIC42.91■■■■■ 4.46
PCDH11YQ9BZA8 CACNG8-202ENST00000638874 1278 ntAPPRIS P2 TSL 1 (best) BASIC42.77■■■■■ 4.44
PCDH11YQ9BZA8 CDV3-203ENST00000431519 955 ntTSL 1 (best) BASIC42.65■■■■■ 4.42
PCDH11YQ9BZA8 ZFYVE21-201ENST00000216602 1521 ntAPPRIS ALT2 TSL 2 BASIC42.64■■■■■ 4.42
PCDH11YQ9BZA8 PHF10-201ENST00000339209 1719 ntAPPRIS P4 TSL 1 (best) BASIC42.64■■■■■ 4.42
PCDH11YQ9BZA8 MPND-201ENST00000262966 1567 ntAPPRIS P3 TSL 1 (best) BASIC42.43■■■■■ 4.38
PCDH11YQ9BZA8 GALR3-201ENST00000249041 1157 ntAPPRIS P1 TSL 1 (best) BASIC42.32■■■■■ 4.37
PCDH11YQ9BZA8 HES6-203ENST00000409160 1600 ntTSL 2 BASIC42.21■■■■■ 4.35
PCDH11YQ9BZA8 ALYREF-202ENST00000505490 1088 ntAPPRIS P1 TSL 1 (best) BASIC42.1■■■■■ 4.33
PCDH11YQ9BZA8 CMTM4-202ENST00000394106 1187 ntAPPRIS P1 TSL 1 (best) BASIC41.87■■■■■ 4.29
PCDH11YQ9BZA8 CMTM4-204ENST00000563952 1023 ntTSL 1 (best) BASIC41.87■■■■■ 4.29
PCDH11YQ9BZA8 GIPC1-205ENST00000586027 1386 ntAPPRIS P1 TSL 2 BASIC41.87■■■■■ 4.29
PCDH11YQ9BZA8 PRR5-217ENST00000617066 1726 ntTSL 5 BASIC41.84■■■■■ 4.29
PCDH11YQ9BZA8 PTF1A-201ENST00000376504 1537 ntAPPRIS P1 TSL 1 (best) BASIC41.77■■■■■ 4.28
PCDH11YQ9BZA8 AL357033.3-201ENST00000620143 614 ntTSL 3 BASIC41.75■■■■■ 4.27
PCDH11YQ9BZA8 INO80B-201ENST00000233331 1261 ntAPPRIS P1 TSL 1 (best) BASIC41.7■■■■■ 4.27
PCDH11YQ9BZA8 PRR5-216ENST00000611394 1843 ntTSL 2 BASIC41.65■■■■■ 4.26
PCDH11YQ9BZA8 FAM89B-203ENST00000530349 1263 ntAPPRIS P1 TSL 2 BASIC41.64■■■■■ 4.26
PCDH11YQ9BZA8 INO80B-203ENST00000409917 796 ntTSL 2 BASIC41.5■■■■■ 4.23
PCDH11YQ9BZA8 CYBA-201ENST00000261623 797 ntAPPRIS P1 TSL 1 (best) BASIC41.4■■■■■ 4.22
PCDH11YQ9BZA8 MAF-203ENST00000569649 1217 ntAPPRIS ALT2 TSL 5 BASIC41.31■■■■■ 4.2
PCDH11YQ9BZA8 SLC25A28-201ENST00000370495 1451 ntAPPRIS P1 TSL 1 (best) BASIC41.07■■■■■ 4.17
PCDH11YQ9BZA8 AC008738.5-201ENST00000587312 482 ntTSL 3 BASIC41.06■■■■■ 4.16
PCDH11YQ9BZA8 AC006077.2-201ENST00000623591 457 ntBASIC41.05■■■■■ 4.16
PCDH11YQ9BZA8 ZNRF2P1-201ENST00000441407 443 ntBASIC41.02■■■■■ 4.16
PCDH11YQ9BZA8 AC015813.7-201ENST00000623294 581 ntBASIC40.9■■■■■ 4.14
PCDH11YQ9BZA8 SATB1-AS1-216ENST00000598149 1119 ntTSL 2 BASIC40.86■■■■■ 4.13
PCDH11YQ9BZA8 CSNK1E-206ENST00000413574 1631 ntTSL 5 BASIC40.69■■■■■ 4.1
PCDH11YQ9BZA8 PRELID2-202ENST00000394450 1102 ntTSL 1 (best) BASIC40.55■■■■■ 4.08
PCDH11YQ9BZA8 ARTN-201ENST00000372354 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC40.53■■■■■ 4.08
PCDH11YQ9BZA8 NT5DC2-203ENST00000459839 1639 ntTSL 1 (best) BASIC40.53■■■■■ 4.08
PCDH11YQ9BZA8 UBE2M-201ENST00000253023 1508 ntAPPRIS P1 TSL 1 (best) BASIC40.41■■■■■ 4.06
PCDH11YQ9BZA8 C11orf68-202ENST00000449692 1559 ntAPPRIS P3 TSL 1 (best) BASIC40.41■■■■■ 4.06
PCDH11YQ9BZA8 NECTIN3-201ENST00000319792 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC40.32■■■■■ 4.05
PCDH11YQ9BZA8 SEPT3-204ENST00000406029 1866 ntTSL 5 BASIC40.29■■■■■ 4.04
PCDH11YQ9BZA8 NKAIN4-203ENST00000370316 1430 ntAPPRIS P1 TSL 1 (best) BASIC40.22■■■■■ 4.03
PCDH11YQ9BZA8 FAM89B-202ENST00000449319 1337 ntTSL 1 (best) BASIC40.21■■■■■ 4.03
PCDH11YQ9BZA8 CAPNS1-206ENST00000588815 1471 ntAPPRIS P2 TSL 1 (best) BASIC40.16■■■■■ 4.02
PCDH11YQ9BZA8 HAGHL-201ENST00000341413 1701 ntTSL 2 BASIC40.13■■■■■ 4.01
PCDH11YQ9BZA8 AP002365.1-201ENST00000603448 772 ntBASIC40.02■■■■■ 4
PCDH11YQ9BZA8 AC079848.1-201ENST00000511301 327 ntTSL 3 BASIC39.78■■■■□ 3.96
PCDH11YQ9BZA8 H2AFV-202ENST00000308153 752 ntAPPRIS P4 TSL 1 (best) BASIC39.76■■■■□ 3.96
PCDH11YQ9BZA8 CLEC3B-201ENST00000296130 936 ntAPPRIS P1 TSL 1 (best) BASIC39.75■■■■□ 3.95
PCDH11YQ9BZA8 FAM58A-202ENST00000440428 1164 ntAPPRIS P2 TSL 2 BASIC39.74■■■■□ 3.95
PCDH11YQ9BZA8 FGF2-203ENST00000614010 867 ntTSL 1 (best) BASIC39.72■■■■□ 3.95
PCDH11YQ9BZA8 NT5M-207ENST00000616989 1635 ntTSL 1 (best) BASIC39.68■■■■□ 3.94
PCDH11YQ9BZA8 AC005524.1-203ENST00000586528 451 ntTSL 3 BASIC39.64■■■■□ 3.94
PCDH11YQ9BZA8 MBD2-202ENST00000398398 1237 ntTSL 2 BASIC39.63■■■■□ 3.93
PCDH11YQ9BZA8 MBD2-205ENST00000583046 1182 ntTSL 1 (best) BASIC39.63■■■■□ 3.93
PCDH11YQ9BZA8 SYNGR1-202ENST00000318801 1361 ntTSL 1 (best) BASIC39.61■■■■□ 3.93
PCDH11YQ9BZA8 METRNL-201ENST00000320095 1605 ntAPPRIS P1 TSL 1 (best) BASIC39.6■■■■□ 3.93
PCDH11YQ9BZA8 HMGB1-205ENST00000399494 1282 ntAPPRIS P1 TSL 2 BASIC39.56■■■■□ 3.92
PCDH11YQ9BZA8 PQLC1-211ENST00000590381 1247 ntTSL 2 BASIC39.56■■■■□ 3.92
PCDH11YQ9BZA8 ARTN-211ENST00000498139 1303 ntAPPRIS P4 TSL 1 (best) BASIC39.56■■■■□ 3.92
PCDH11YQ9BZA8 HOXB3-208ENST00000476342 1420 ntAPPRIS P1 TSL 1 (best) BASIC39.55■■■■□ 3.92
PCDH11YQ9BZA8 AL355297.4-201ENST00000603191 1249 ntTSL 3 BASIC39.49■■■■□ 3.91
PCDH11YQ9BZA8 NRGN-201ENST00000284292 1306 ntAPPRIS P1 TSL 1 (best) BASIC39.44■■■■□ 3.9
PCDH11YQ9BZA8 LINC01578-201ENST00000553829 732 ntTSL 2 BASIC39.4■■■■□ 3.9
PCDH11YQ9BZA8 RAN-202ENST00000392369 1530 ntAPPRIS P1 TSL 1 (best) BASIC39.39■■■■□ 3.9
PCDH11YQ9BZA8 LIMCH1-211ENST00000509638 1570 ntTSL 1 (best) BASIC39.37■■■■□ 3.89
PCDH11YQ9BZA8 CHCHD4-202ENST00000396914 1405 ntAPPRIS P1 TSL 1 (best) BASIC39.35■■■■□ 3.89
PCDH11YQ9BZA8 NKX1-1-201ENST00000422806 1236 ntAPPRIS P1 TSL 5 BASIC39.29■■■■□ 3.88
PCDH11YQ9BZA8 FAM149A-215ENST00000514153 2070 ntAPPRIS P2 TSL 5 BASIC39.28■■■■□ 3.88
PCDH11YQ9BZA8 MAP6D1-202ENST00000431348 890 ntAPPRIS ALT2 TSL 2 BASIC39.28■■■■□ 3.88
PCDH11YQ9BZA8 AL136373.1-201ENST00000634804 1449 ntAPPRIS P1 BASIC39.27■■■■□ 3.88
PCDH11YQ9BZA8 GSTZ1-201ENST00000216465 1338 ntAPPRIS P2 TSL 1 (best) BASIC39.23■■■■□ 3.87
PCDH11YQ9BZA8 AGTRAP-204ENST00000376637 1067 ntTSL 2 BASIC39.23■■■■□ 3.87
PCDH11YQ9BZA8 NT5DC2-202ENST00000422318 1795 ntAPPRIS ALT2 TSL 5 BASIC39.21■■■■□ 3.87
PCDH11YQ9BZA8 AP001107.7-201ENST00000533287 272 ntTSL 2 BASIC39.2■■■■□ 3.87
PCDH11YQ9BZA8 CCM2-219ENST00000544363 1620 ntTSL 3 BASIC39.18■■■■□ 3.86
PCDH11YQ9BZA8 CBX4-202ENST00000448310 718 ntAPPRIS ALT2 TSL 3 BASIC39.17■■■■□ 3.86
PCDH11YQ9BZA8 CYHR1-209ENST00000530374 1870 ntTSL 3 BASIC39.17■■■■□ 3.86
PCDH11YQ9BZA8 DYNLL1-207ENST00000549989 719 ntAPPRIS P1 TSL 1 (best) BASIC39.15■■■■□ 3.86
PCDH11YQ9BZA8 DYNLL1-208ENST00000550178 581 ntBASIC39.15■■■■□ 3.86
PCDH11YQ9BZA8 MSANTD3-203ENST00000395067 1362 ntAPPRIS P1 TSL 1 (best) BASIC39.14■■■■□ 3.86
PCDH11YQ9BZA8 HRH3-201ENST00000317393 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC39.12■■■■□ 3.85
PCDH11YQ9BZA8 LINC01578-203ENST00000554669 578 ntTSL 5 BASIC39.06■■■■□ 3.84
PCDH11YQ9BZA8 ECHS1-201ENST00000368547 1617 ntAPPRIS P1 TSL 1 (best) BASIC39.01■■■■□ 3.84
PCDH11YQ9BZA8 SAP30-201ENST00000296504 1108 ntAPPRIS P1 TSL 1 (best) BASIC39.01■■■■□ 3.84
PCDH11YQ9BZA8 MPND-207ENST00000599840 1611 ntAPPRIS ALT2 TSL 5 BASIC39■■■■□ 3.83
PCDH11YQ9BZA8 PWWP2B-202ENST00000631148 2013 ntTSL 5 BASIC38.99■■■■□ 3.83
PCDH11YQ9BZA8 FAM149A-205ENST00000502970 1990 ntAPPRIS P2 TSL 5 BASIC38.98■■■■□ 3.83
PCDH11YQ9BZA8 ANAPC11-203ENST00000392376 687 ntAPPRIS P1 TSL 1 (best) BASIC38.9■■■■□ 3.82
PCDH11YQ9BZA8 AL031258.1-201ENST00000623562 325 ntBASIC38.87■■■■□ 3.81
PCDH11YQ9BZA8 PLPP2-203ENST00000434325 1383 ntAPPRIS P1 TSL 1 (best) BASIC38.86■■■■□ 3.81
PCDH11YQ9BZA8 ANKRD65-203ENST00000454272 1506 ntAPPRIS P1 TSL 5 BASIC38.86■■■■□ 3.81
PCDH11YQ9BZA8 LINC01089-207ENST00000538335 630 ntTSL 3 BASIC38.84■■■■□ 3.81
PCDH11YQ9BZA8 INAFM1-201ENST00000552360 1255 ntAPPRIS P1 BASIC38.8■■■■□ 3.8
PCDH11YQ9BZA8 DRD4-201ENST00000176183 1375 ntAPPRIS P1 TSL 1 (best) BASIC38.74■■■■□ 3.79
Retrieved 100 of 98,524 protein–RNA pairs in 16.4 ms