Protein–RNA interactions for Protein: Q99731

CCL19, C-C motif chemokine 19, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL19Q99731 FBLL1-201ENST00000338333 1519 ntAPPRIS P1 BASIC29.46■■■□□ 2.31
CCL19Q99731 SSSCA1-205ENST00000527920 806 ntTSL 3 BASIC29.16■■■□□ 2.26
CCL19Q99731 HRAS-203ENST00000397596 1100 ntAPPRIS P1 TSL 3 BASIC28.73■■■□□ 2.19
CCL19Q99731 PPP1CA-203ENST00000376745 1476 ntAPPRIS P1 TSL 1 (best) BASIC28.69■■■□□ 2.18
CCL19Q99731 AES-202ENST00000327141 1608 ntAPPRIS P1 TSL 1 (best) BASIC28.51■■■□□ 2.15
CCL19Q99731 CSNK1E-204ENST00000403904 1580 ntAPPRIS P1 TSL 5 BASIC28.36■■■□□ 2.13
CCL19Q99731 TCF15-201ENST00000246080 1555 ntAPPRIS P1 TSL 1 (best) BASIC28.25■■■□□ 2.11
CCL19Q99731 AL356512.1-201ENST00000607453 1739 ntBASIC28.13■■■□□ 2.09
CCL19Q99731 ANKRD60-201ENST00000457363 1038 ntAPPRIS P1 TSL 5 BASIC27.97■■■□□ 2.07
CCL19Q99731 PPP2CB-204ENST00000518564 691 ntTSL 3 BASIC27.9■■■□□ 2.06
CCL19Q99731 CACNG8-202ENST00000638874 1278 ntAPPRIS P2 TSL 1 (best) BASIC27.7■■■□□ 2.02
CCL19Q99731 TAF5L-202ENST00000366674 492 ntTSL 3 BASIC27.69■■■□□ 2.02
CCL19Q99731 OLFM1-208ENST00000392991 1057 ntTSL 2 BASIC27.68■■■□□ 2.02
CCL19Q99731 CDV3-203ENST00000431519 955 ntTSL 1 (best) BASIC27.63■■■□□ 2.01
CCL19Q99731 ZFYVE21-201ENST00000216602 1521 ntAPPRIS ALT2 TSL 2 BASIC27.54■■■□□ 2
CCL19Q99731 PHF10-201ENST00000339209 1719 ntAPPRIS P4 TSL 1 (best) BASIC27.5■■□□□ 1.99
CCL19Q99731 MPND-201ENST00000262966 1567 ntAPPRIS P3 TSL 1 (best) BASIC27.37■■□□□ 1.97
CCL19Q99731 GALR3-201ENST00000249041 1157 ntAPPRIS P1 TSL 1 (best) BASIC27.31■■□□□ 1.96
CCL19Q99731 ALYREF-202ENST00000505490 1088 ntAPPRIS P1 TSL 1 (best) BASIC27.15■■□□□ 1.94
CCL19Q99731 HES6-203ENST00000409160 1600 ntTSL 2 BASIC27.15■■□□□ 1.94
CCL19Q99731 CMTM4-202ENST00000394106 1187 ntAPPRIS P1 TSL 1 (best) BASIC27.09■■□□□ 1.93
CCL19Q99731 CMTM4-204ENST00000563952 1023 ntTSL 1 (best) BASIC27.09■■□□□ 1.93
CCL19Q99731 FAM89B-203ENST00000530349 1263 ntAPPRIS P1 TSL 2 BASIC27.07■■□□□ 1.92
CCL19Q99731 AL357033.3-201ENST00000620143 614 ntTSL 3 BASIC27.05■■□□□ 1.92
CCL19Q99731 INO80B-201ENST00000233331 1261 ntAPPRIS P1 TSL 1 (best) BASIC26.98■■□□□ 1.91
CCL19Q99731 GIPC1-205ENST00000586027 1386 ntAPPRIS P1 TSL 2 BASIC26.97■■□□□ 1.91
CCL19Q99731 PRR5-217ENST00000617066 1726 ntTSL 5 BASIC26.9■■□□□ 1.9
CCL19Q99731 PTF1A-201ENST00000376504 1537 ntAPPRIS P1 TSL 1 (best) BASIC26.86■■□□□ 1.89
CCL19Q99731 PRR5-216ENST00000611394 1843 ntTSL 2 BASIC26.83■■□□□ 1.89
CCL19Q99731 INO80B-203ENST00000409917 796 ntTSL 2 BASIC26.8■■□□□ 1.88
CCL19Q99731 CYBA-201ENST00000261623 797 ntAPPRIS P1 TSL 1 (best) BASIC26.77■■□□□ 1.88
CCL19Q99731 MAF-203ENST00000569649 1217 ntAPPRIS ALT2 TSL 5 BASIC26.65■■□□□ 1.86
CCL19Q99731 AC008738.5-201ENST00000587312 482 ntTSL 3 BASIC26.55■■□□□ 1.84
CCL19Q99731 AC006077.2-201ENST00000623591 457 ntBASIC26.53■■□□□ 1.84
CCL19Q99731 ZNRF2P1-201ENST00000441407 443 ntBASIC26.52■■□□□ 1.84
CCL19Q99731 SLC25A28-201ENST00000370495 1451 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
CCL19Q99731 SATB1-AS1-216ENST00000598149 1119 ntTSL 2 BASIC26.49■■□□□ 1.83
CCL19Q99731 AC015813.7-201ENST00000623294 581 ntBASIC26.38■■□□□ 1.81
CCL19Q99731 PRELID2-202ENST00000394450 1102 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
CCL19Q99731 ARTN-201ENST00000372354 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC26.25■■□□□ 1.79
CCL19Q99731 CSNK1E-206ENST00000413574 1631 ntTSL 5 BASIC26.24■■□□□ 1.79
CCL19Q99731 UBE2M-201ENST00000253023 1508 ntAPPRIS P1 TSL 1 (best) BASIC26.08■■□□□ 1.77
CCL19Q99731 NT5DC2-203ENST00000459839 1639 ntTSL 1 (best) BASIC26.06■■□□□ 1.76
CCL19Q99731 C11orf68-202ENST00000449692 1559 ntAPPRIS P3 TSL 1 (best) BASIC26.04■■□□□ 1.76
CCL19Q99731 NKAIN4-203ENST00000370316 1430 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
CCL19Q99731 FAM89B-202ENST00000449319 1337 ntTSL 1 (best) BASIC26■■□□□ 1.75
CCL19Q99731 HAGHL-201ENST00000341413 1701 ntTSL 2 BASIC25.92■■□□□ 1.74
CCL19Q99731 NECTIN3-201ENST00000319792 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC25.9■■□□□ 1.74
CCL19Q99731 SEPT3-204ENST00000406029 1866 ntTSL 5 BASIC25.88■■□□□ 1.73
CCL19Q99731 AP002365.1-201ENST00000603448 772 ntBASIC25.88■■□□□ 1.73
CCL19Q99731 CAPNS1-206ENST00000588815 1471 ntAPPRIS P2 TSL 1 (best) BASIC25.85■■□□□ 1.73
CCL19Q99731 CLEC3B-201ENST00000296130 936 ntAPPRIS P1 TSL 1 (best) BASIC25.75■■□□□ 1.71
CCL19Q99731 SYNGR1-202ENST00000318801 1361 ntTSL 1 (best) BASIC25.7■■□□□ 1.71
CCL19Q99731 MBD2-202ENST00000398398 1237 ntTSL 2 BASIC25.69■■□□□ 1.7
CCL19Q99731 MBD2-205ENST00000583046 1182 ntTSL 1 (best) BASIC25.69■■□□□ 1.7
CCL19Q99731 H2AFV-202ENST00000308153 752 ntAPPRIS P4 TSL 1 (best) BASIC25.66■■□□□ 1.7
CCL19Q99731 AC079848.1-201ENST00000511301 327 ntTSL 3 BASIC25.65■■□□□ 1.7
CCL19Q99731 FAM58A-202ENST00000440428 1164 ntAPPRIS P2 TSL 2 BASIC25.64■■□□□ 1.7
CCL19Q99731 FGF2-203ENST00000614010 867 ntTSL 1 (best) BASIC25.64■■□□□ 1.7
CCL19Q99731 NT5M-207ENST00000616989 1635 ntTSL 1 (best) BASIC25.6■■□□□ 1.69
CCL19Q99731 HMGB1-205ENST00000399494 1282 ntAPPRIS P1 TSL 2 BASIC25.58■■□□□ 1.69
CCL19Q99731 PQLC1-211ENST00000590381 1247 ntTSL 2 BASIC25.58■■□□□ 1.69
CCL19Q99731 AL355297.4-201ENST00000603191 1249 ntTSL 3 BASIC25.56■■□□□ 1.68
CCL19Q99731 HOXB3-208ENST00000476342 1420 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
CCL19Q99731 ARTN-211ENST00000498139 1303 ntAPPRIS P4 TSL 1 (best) BASIC25.54■■□□□ 1.68
CCL19Q99731 AC005524.1-203ENST00000586528 451 ntTSL 3 BASIC25.52■■□□□ 1.68
CCL19Q99731 METRNL-201ENST00000320095 1605 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
CCL19Q99731 CHCHD4-202ENST00000396914 1405 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
CCL19Q99731 NKX1-1-201ENST00000422806 1236 ntAPPRIS P1 TSL 5 BASIC25.48■■□□□ 1.67
CCL19Q99731 LINC01578-201ENST00000553829 732 ntTSL 2 BASIC25.45■■□□□ 1.66
CCL19Q99731 NRGN-201ENST00000284292 1306 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
CCL19Q99731 MAP6D1-202ENST00000431348 890 ntAPPRIS ALT2 TSL 2 BASIC25.41■■□□□ 1.66
CCL19Q99731 AL136373.1-201ENST00000634804 1449 ntAPPRIS P1 BASIC25.4■■□□□ 1.66
CCL19Q99731 LIMCH1-211ENST00000509638 1570 ntTSL 1 (best) BASIC25.39■■□□□ 1.65
CCL19Q99731 RAN-202ENST00000392369 1530 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
CCL19Q99731 AP001107.7-201ENST00000533287 272 ntTSL 2 BASIC25.38■■□□□ 1.65
CCL19Q99731 CBX4-202ENST00000448310 718 ntAPPRIS ALT2 TSL 3 BASIC25.36■■□□□ 1.65
CCL19Q99731 GSTZ1-201ENST00000216465 1338 ntAPPRIS P2 TSL 1 (best) BASIC25.35■■□□□ 1.65
CCL19Q99731 AGTRAP-204ENST00000376637 1067 ntTSL 2 BASIC25.32■■□□□ 1.64
CCL19Q99731 HRH3-201ENST00000317393 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC25.31■■□□□ 1.64
CCL19Q99731 FAM149A-215ENST00000514153 2070 ntAPPRIS P2 TSL 5 BASIC25.31■■□□□ 1.64
CCL19Q99731 DYNLL1-207ENST00000549989 719 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
CCL19Q99731 DYNLL1-208ENST00000550178 581 ntBASIC25.29■■□□□ 1.64
CCL19Q99731 MSANTD3-203ENST00000395067 1362 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
CCL19Q99731 NT5DC2-202ENST00000422318 1795 ntAPPRIS ALT2 TSL 5 BASIC25.24■■□□□ 1.63
CCL19Q99731 FBRSL1-201ENST00000434748 5568 ntAPPRIS P2 TSL 1 (best) BASIC25.24■■□□□ 1.63
CCL19Q99731 CCM2-219ENST00000544363 1620 ntTSL 3 BASIC25.22■■□□□ 1.63
CCL19Q99731 SAP30-201ENST00000296504 1108 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.62
CCL19Q99731 LINC01089-207ENST00000538335 630 ntTSL 3 BASIC25.19■■□□□ 1.62
CCL19Q99731 CYHR1-209ENST00000530374 1870 ntTSL 3 BASIC25.17■■□□□ 1.62
CCL19Q99731 LINC01578-203ENST00000554669 578 ntTSL 5 BASIC25.16■■□□□ 1.62
CCL19Q99731 ECHS1-201ENST00000368547 1617 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
CCL19Q99731 ANAPC11-203ENST00000392376 687 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
CCL19Q99731 PWWP2B-202ENST00000631148 2013 ntTSL 5 BASIC25.08■■□□□ 1.61
CCL19Q99731 INAFM1-201ENST00000552360 1255 ntAPPRIS P1 BASIC25.08■■□□□ 1.61
CCL19Q99731 PLPP2-203ENST00000434325 1383 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
CCL19Q99731 ANKRD65-203ENST00000454272 1506 ntAPPRIS P1 TSL 5 BASIC25.06■■□□□ 1.6
CCL19Q99731 FAM149A-205ENST00000502970 1990 ntAPPRIS P2 TSL 5 BASIC25.05■■□□□ 1.6
CCL19Q99731 NRTN-201ENST00000303212 1109 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
CCL19Q99731 AL031258.1-201ENST00000623562 325 ntBASIC25.05■■□□□ 1.6
Retrieved 100 of 98,524 protein–RNA pairs in 27.9 ms