Protein–RNA interactions for Protein: Q96P44

COL21A1, Collagen alpha-1(XXI) chain, humanhuman

Predictions only

Length 957 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1Q96P44 FBLL1-201ENST00000338333 1519 ntAPPRIS P1 BASIC31.48■■■□□ 2.63
COL21A1Q96P44 TCF15-201ENST00000246080 1555 ntAPPRIS P1 TSL 1 (best) BASIC31.25■■■□□ 2.59
COL21A1Q96P44 AL356512.1-201ENST00000607453 1739 ntBASIC30.67■■■□□ 2.5
COL21A1Q96P44 SEPT3-204ENST00000406029 1866 ntTSL 5 BASIC30.65■■■□□ 2.5
COL21A1Q96P44 CSNK1E-204ENST00000403904 1580 ntAPPRIS P1 TSL 5 BASIC30.63■■■□□ 2.49
COL21A1Q96P44 HES6-203ENST00000409160 1600 ntTSL 2 BASIC30.55■■■□□ 2.48
COL21A1Q96P44 AC116565.1-201ENST00000610212 2421 ntAPPRIS P1 BASIC30.54■■■□□ 2.48
COL21A1Q96P44 AES-202ENST00000327141 1608 ntAPPRIS P1 TSL 1 (best) BASIC30.49■■■□□ 2.47
COL21A1Q96P44 PPP1CA-203ENST00000376745 1476 ntAPPRIS P1 TSL 1 (best) BASIC30.46■■■□□ 2.47
COL21A1Q96P44 PRR5-217ENST00000617066 1726 ntTSL 5 BASIC30.27■■■□□ 2.44
COL21A1Q96P44 SSSCA1-205ENST00000527920 806 ntTSL 3 BASIC30.23■■■□□ 2.43
COL21A1Q96P44 FBRSL1-201ENST00000434748 5568 ntAPPRIS P2 TSL 1 (best) BASIC29.97■■■□□ 2.39
COL21A1Q96P44 PRR5-216ENST00000611394 1843 ntTSL 2 BASIC29.96■■■□□ 2.39
COL21A1Q96P44 PHF10-201ENST00000339209 1719 ntAPPRIS P4 TSL 1 (best) BASIC29.82■■■□□ 2.36
COL21A1Q96P44 RAB12-201ENST00000329286 2137 ntAPPRIS P1 TSL 1 (best) BASIC29.65■■■□□ 2.34
COL21A1Q96P44 HRAS-203ENST00000397596 1100 ntAPPRIS P1 TSL 3 BASIC29.62■■■□□ 2.33
COL21A1Q96P44 FOXD1-202ENST00000615637 2272 ntAPPRIS P1 BASIC29.48■■■□□ 2.31
COL21A1Q96P44 ZFYVE21-201ENST00000216602 1521 ntAPPRIS ALT2 TSL 2 BASIC29.45■■■□□ 2.31
COL21A1Q96P44 PPP2CB-201ENST00000221138 2006 ntAPPRIS P1 TSL 1 (best) BASIC29.38■■■□□ 2.29
COL21A1Q96P44 PTF1A-201ENST00000376504 1537 ntAPPRIS P1 TSL 1 (best) BASIC29.37■■■□□ 2.29
COL21A1Q96P44 CYHR1-209ENST00000530374 1870 ntTSL 3 BASIC29.34■■■□□ 2.29
COL21A1Q96P44 FAM149A-205ENST00000502970 1990 ntAPPRIS P2 TSL 5 BASIC29.32■■■□□ 2.28
COL21A1Q96P44 OLFM1-208ENST00000392991 1057 ntTSL 2 BASIC29.17■■■□□ 2.26
COL21A1Q96P44 NECTIN3-201ENST00000319792 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC29.13■■■□□ 2.25
COL21A1Q96P44 ANKRD60-201ENST00000457363 1038 ntAPPRIS P1 TSL 5 BASIC29.08■■■□□ 2.25
COL21A1Q96P44 ZNF358-202ENST00000597229 1954 ntAPPRIS P1 TSL 2 BASIC29.08■■■□□ 2.25
COL21A1Q96P44 TAF5L-202ENST00000366674 492 ntTSL 3 BASIC29.01■■■□□ 2.23
COL21A1Q96P44 ACOT7-209ENST00000545482 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC29.01■■■□□ 2.23
COL21A1Q96P44 MPND-201ENST00000262966 1567 ntAPPRIS P3 TSL 1 (best) BASIC29.01■■■□□ 2.23
COL21A1Q96P44 PPP2CB-204ENST00000518564 691 ntTSL 3 BASIC28.86■■■□□ 2.21
COL21A1Q96P44 C11orf63-202ENST00000307257 1964 ntTSL 2 BASIC28.85■■■□□ 2.21
COL21A1Q96P44 GIPC1-205ENST00000586027 1386 ntAPPRIS P1 TSL 2 BASIC28.85■■■□□ 2.21
COL21A1Q96P44 CAPNS1-206ENST00000588815 1471 ntAPPRIS P2 TSL 1 (best) BASIC28.8■■■□□ 2.2
COL21A1Q96P44 TGIF1-202ENST00000343820 2076 ntAPPRIS P1 TSL 1 (best) BASIC28.78■■■□□ 2.2
COL21A1Q96P44 KHSRP-213ENST00000619396 2226 ntAPPRIS ALT2 TSL 5 BASIC28.72■■■□□ 2.19
COL21A1Q96P44 TRIP10-202ENST00000313285 2035 ntAPPRIS P1 TSL 1 (best) BASIC28.69■■■□□ 2.18
COL21A1Q96P44 MPND-207ENST00000599840 1611 ntAPPRIS ALT2 TSL 5 BASIC28.61■■■□□ 2.17
COL21A1Q96P44 NT5DC2-203ENST00000459839 1639 ntTSL 1 (best) BASIC28.54■■■□□ 2.16
COL21A1Q96P44 SLC25A28-201ENST00000370495 1451 ntAPPRIS P1 TSL 1 (best) BASIC28.53■■■□□ 2.16
COL21A1Q96P44 FAM149A-215ENST00000514153 2070 ntAPPRIS P2 TSL 5 BASIC28.47■■■□□ 2.15
COL21A1Q96P44 CCM2-219ENST00000544363 1620 ntTSL 3 BASIC28.32■■■□□ 2.12
COL21A1Q96P44 METRNL-201ENST00000320095 1605 ntAPPRIS P1 TSL 1 (best) BASIC28.23■■■□□ 2.11
COL21A1Q96P44 GALR3-201ENST00000249041 1157 ntAPPRIS P1 TSL 1 (best) BASIC28.22■■■□□ 2.11
COL21A1Q96P44 CDV3-203ENST00000431519 955 ntTSL 1 (best) BASIC28.17■■■□□ 2.1
COL21A1Q96P44 CACNG8-202ENST00000638874 1278 ntAPPRIS P2 TSL 1 (best) BASIC28.16■■■□□ 2.1
COL21A1Q96P44 CMTM4-202ENST00000394106 1187 ntAPPRIS P1 TSL 1 (best) BASIC28.15■■■□□ 2.1
COL21A1Q96P44 CMTM4-204ENST00000563952 1023 ntTSL 1 (best) BASIC28.15■■■□□ 2.1
COL21A1Q96P44 UBE2M-201ENST00000253023 1508 ntAPPRIS P1 TSL 1 (best) BASIC28.13■■■□□ 2.09
COL21A1Q96P44 CSNK1E-206ENST00000413574 1631 ntTSL 5 BASIC28.12■■■□□ 2.09
COL21A1Q96P44 INO80B-201ENST00000233331 1261 ntAPPRIS P1 TSL 1 (best) BASIC28.08■■■□□ 2.09
COL21A1Q96P44 B4GALT2-203ENST00000372324 2203 ntAPPRIS P1 TSL 1 (best) BASIC28.02■■■□□ 2.08
COL21A1Q96P44 AL357033.3-201ENST00000620143 614 ntTSL 3 BASIC28.02■■■□□ 2.08
COL21A1Q96P44 INO80B-WBP1-202ENST00000452361 2040 ntAPPRIS P5 TSL 2 BASIC28.01■■■□□ 2.07
COL21A1Q96P44 PABPN1-201ENST00000216727 2001 ntAPPRIS P2 TSL 1 (best) BASIC27.98■■■□□ 2.07
COL21A1Q96P44 MAPK3-201ENST00000263025 1861 ntAPPRIS P3 TSL 1 (best) BASIC27.93■■■□□ 2.06
COL21A1Q96P44 INO80B-203ENST00000409917 796 ntTSL 2 BASIC27.91■■■□□ 2.06
COL21A1Q96P44 NKAIN4-203ENST00000370316 1430 ntAPPRIS P1 TSL 1 (best) BASIC27.91■■■□□ 2.06
COL21A1Q96P44 FAM89B-203ENST00000530349 1263 ntAPPRIS P1 TSL 2 BASIC27.87■■■□□ 2.05
COL21A1Q96P44 GPI-201ENST00000356487 2210 ntAPPRIS P1 TSL 1 (best) BASIC27.83■■■□□ 2.05
COL21A1Q96P44 NT5DC2-202ENST00000422318 1795 ntAPPRIS ALT2 TSL 5 BASIC27.81■■■□□ 2.04
COL21A1Q96P44 PWWP2B-202ENST00000631148 2013 ntTSL 5 BASIC27.8■■■□□ 2.04
COL21A1Q96P44 C11orf68-202ENST00000449692 1559 ntAPPRIS P3 TSL 1 (best) BASIC27.8■■■□□ 2.04
COL21A1Q96P44 ILK-212ENST00000532063 1617 ntTSL 2 BASIC27.74■■■□□ 2.03
COL21A1Q96P44 CRIP2-201ENST00000329146 1857 ntAPPRIS P1 TSL 1 (best) BASIC27.74■■■□□ 2.03
COL21A1Q96P44 HAPLN2-201ENST00000255039 1771 ntAPPRIS P1 TSL 1 (best) BASIC27.71■■■□□ 2.03
COL21A1Q96P44 IFNGR2-201ENST00000290219 2221 ntAPPRIS P3 TSL 1 (best) BASIC27.64■■■□□ 2.01
COL21A1Q96P44 C11orf84-201ENST00000294244 2024 ntAPPRIS P1 TSL 1 (best) BASIC27.63■■■□□ 2.01
COL21A1Q96P44 AC015813.7-201ENST00000623294 581 ntBASIC27.62■■■□□ 2.01
COL21A1Q96P44 MAPK3-202ENST00000322266 1743 ntTSL 5 BASIC27.61■■■□□ 2.01
COL21A1Q96P44 SLC25A10-203ENST00000545862 1911 ntTSL 1 (best) BASIC27.61■■■□□ 2.01
COL21A1Q96P44 FEZF2-201ENST00000283268 2074 ntAPPRIS P1 TSL 1 (best) BASIC27.56■■■□□ 2
COL21A1Q96P44 NT5M-207ENST00000616989 1635 ntTSL 1 (best) BASIC27.54■■■□□ 2
COL21A1Q96P44 LMO2-202ENST00000395833 1687 ntAPPRIS P1 TSL 1 (best) BASIC27.52■■■□□ 2
COL21A1Q96P44 KIAA2013-203ENST00000616327 2170 ntAPPRIS P1 TSL 5 BASIC27.5■■□□□ 1.99
COL21A1Q96P44 SSBP3-204ENST00000371320 2077 ntAPPRIS P3 TSL 1 (best) BASIC27.41■■□□□ 1.98
COL21A1Q96P44 ADRA1D-201ENST00000379453 2728 ntAPPRIS P1 TSL 1 (best) BASIC27.4■■□□□ 1.98
COL21A1Q96P44 SATB1-AS1-216ENST00000598149 1119 ntTSL 2 BASIC27.4■■□□□ 1.98
COL21A1Q96P44 ALYREF-202ENST00000505490 1088 ntAPPRIS P1 TSL 1 (best) BASIC27.38■■□□□ 1.97
COL21A1Q96P44 RAN-202ENST00000392369 1530 ntAPPRIS P1 TSL 1 (best) BASIC27.37■■□□□ 1.97
COL21A1Q96P44 FEZF2-203ENST00000486811 2001 ntAPPRIS P1 TSL 5 BASIC27.36■■□□□ 1.97
COL21A1Q96P44 HAGHL-201ENST00000341413 1701 ntTSL 2 BASIC27.36■■□□□ 1.97
COL21A1Q96P44 AC008738.5-201ENST00000587312 482 ntTSL 3 BASIC27.33■■□□□ 1.97
COL21A1Q96P44 CTDNEP1-208ENST00000573600 1724 ntAPPRIS P1 TSL 5 BASIC27.28■■□□□ 1.96
COL21A1Q96P44 LIMCH1-211ENST00000509638 1570 ntTSL 1 (best) BASIC27.26■■□□□ 1.95
COL21A1Q96P44 CSNK1E-205ENST00000405675 2127 ntTSL 5 BASIC27.25■■□□□ 1.95
COL21A1Q96P44 CYBA-201ENST00000261623 797 ntAPPRIS P1 TSL 1 (best) BASIC27.24■■□□□ 1.95
COL21A1Q96P44 AGAP1-204ENST00000409457 2165 ntTSL 1 (best) BASIC27.21■■□□□ 1.95
COL21A1Q96P44 AC006077.2-201ENST00000623591 457 ntBASIC27.2■■□□□ 1.94
COL21A1Q96P44 AL136373.1-201ENST00000634804 1449 ntAPPRIS P1 BASIC27.2■■□□□ 1.94
COL21A1Q96P44 ECHS1-201ENST00000368547 1617 ntAPPRIS P1 TSL 1 (best) BASIC27.19■■□□□ 1.94
COL21A1Q96P44 HOXB3-208ENST00000476342 1420 ntAPPRIS P1 TSL 1 (best) BASIC27.18■■□□□ 1.94
COL21A1Q96P44 SULT4A1-201ENST00000330884 2468 ntAPPRIS P1 TSL 1 (best) BASIC27.16■■□□□ 1.94
COL21A1Q96P44 FAM89B-202ENST00000449319 1337 ntTSL 1 (best) BASIC27.16■■□□□ 1.94
COL21A1Q96P44 GRASP-206ENST00000552049 1688 ntTSL 1 (best) BASIC27.14■■□□□ 1.93
COL21A1Q96P44 TPRG1L-201ENST00000344579 2189 ntTSL 1 (best) BASIC27.06■■□□□ 1.92
COL21A1Q96P44 ZNRF2P1-201ENST00000441407 443 ntBASIC27.05■■□□□ 1.92
COL21A1Q96P44 CHCHD4-202ENST00000396914 1405 ntAPPRIS P1 TSL 1 (best) BASIC27.03■■□□□ 1.92
COL21A1Q96P44 Z97634.1-201ENST00000412293 1715 ntTSL 1 (best) BASIC27.03■■□□□ 1.92
COL21A1Q96P44 AC145285.7-201ENST00000614819 1539 ntBASIC27■■□□□ 1.91
COL21A1Q96P44 PRELID2-202ENST00000394450 1102 ntTSL 1 (best) BASIC26.95■■□□□ 1.9
Retrieved 100 of 98,524 protein–RNA pairs in 119.8 ms