Protein–RNA interactions for Protein: Q96H12

MSANTD3, Myb/SANT-like DNA-binding domain-containing protein 3, humanhuman

Predictions only

Length 275 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSANTD3Q96H12 FBLL1-201ENST00000338333 1519 ntAPPRIS P1 BASIC35.47■■■■□ 3.27
MSANTD3Q96H12 SSSCA1-205ENST00000527920 806 ntTSL 3 BASIC35.22■■■■□ 3.23
MSANTD3Q96H12 HRAS-203ENST00000397596 1100 ntAPPRIS P1 TSL 3 BASIC34.67■■■■□ 3.14
MSANTD3Q96H12 PPP1CA-203ENST00000376745 1476 ntAPPRIS P1 TSL 1 (best) BASIC34.62■■■■□ 3.13
MSANTD3Q96H12 AES-202ENST00000327141 1608 ntAPPRIS P1 TSL 1 (best) BASIC34.31■■■■□ 3.08
MSANTD3Q96H12 CSNK1E-204ENST00000403904 1580 ntAPPRIS P1 TSL 5 BASIC34.09■■■■□ 3.05
MSANTD3Q96H12 TCF15-201ENST00000246080 1555 ntAPPRIS P1 TSL 1 (best) BASIC34.03■■■■□ 3.04
MSANTD3Q96H12 AL356512.1-201ENST00000607453 1739 ntBASIC33.82■■■■□ 3
MSANTD3Q96H12 ANKRD60-201ENST00000457363 1038 ntAPPRIS P1 TSL 5 BASIC33.68■■■□□ 2.98
MSANTD3Q96H12 PPP2CB-204ENST00000518564 691 ntTSL 3 BASIC33.56■■■□□ 2.96
MSANTD3Q96H12 OLFM1-208ENST00000392991 1057 ntTSL 2 BASIC33.35■■■□□ 2.93
MSANTD3Q96H12 TAF5L-202ENST00000366674 492 ntTSL 3 BASIC33.33■■■□□ 2.93
MSANTD3Q96H12 CACNG8-202ENST00000638874 1278 ntAPPRIS P2 TSL 1 (best) BASIC33.32■■■□□ 2.92
MSANTD3Q96H12 CDV3-203ENST00000431519 955 ntTSL 1 (best) BASIC33.16■■■□□ 2.9
MSANTD3Q96H12 ZFYVE21-201ENST00000216602 1521 ntAPPRIS ALT2 TSL 2 BASIC33.12■■■□□ 2.89
MSANTD3Q96H12 PHF10-201ENST00000339209 1719 ntAPPRIS P4 TSL 1 (best) BASIC33.03■■■□□ 2.88
MSANTD3Q96H12 GALR3-201ENST00000249041 1157 ntAPPRIS P1 TSL 1 (best) BASIC32.97■■■□□ 2.87
MSANTD3Q96H12 MPND-201ENST00000262966 1567 ntAPPRIS P3 TSL 1 (best) BASIC32.92■■■□□ 2.86
MSANTD3Q96H12 ALYREF-202ENST00000505490 1088 ntAPPRIS P1 TSL 1 (best) BASIC32.8■■■□□ 2.84
MSANTD3Q96H12 HES6-203ENST00000409160 1600 ntTSL 2 BASIC32.72■■■□□ 2.83
MSANTD3Q96H12 FAM89B-203ENST00000530349 1263 ntAPPRIS P1 TSL 2 BASIC32.58■■■□□ 2.81
MSANTD3Q96H12 CMTM4-202ENST00000394106 1187 ntAPPRIS P1 TSL 1 (best) BASIC32.55■■■□□ 2.8
MSANTD3Q96H12 CMTM4-204ENST00000563952 1023 ntTSL 1 (best) BASIC32.55■■■□□ 2.8
MSANTD3Q96H12 AL357033.3-201ENST00000620143 614 ntTSL 3 BASIC32.52■■■□□ 2.8
MSANTD3Q96H12 GIPC1-205ENST00000586027 1386 ntAPPRIS P1 TSL 2 BASIC32.45■■■□□ 2.79
MSANTD3Q96H12 INO80B-201ENST00000233331 1261 ntAPPRIS P1 TSL 1 (best) BASIC32.45■■■□□ 2.79
MSANTD3Q96H12 PTF1A-201ENST00000376504 1537 ntAPPRIS P1 TSL 1 (best) BASIC32.35■■■□□ 2.77
MSANTD3Q96H12 PRR5-217ENST00000617066 1726 ntTSL 5 BASIC32.34■■■□□ 2.77
MSANTD3Q96H12 PRR5-216ENST00000611394 1843 ntTSL 2 BASIC32.24■■■□□ 2.75
MSANTD3Q96H12 CYBA-201ENST00000261623 797 ntAPPRIS P1 TSL 1 (best) BASIC32.21■■■□□ 2.75
MSANTD3Q96H12 INO80B-203ENST00000409917 796 ntTSL 2 BASIC32.21■■■□□ 2.75
MSANTD3Q96H12 MAF-203ENST00000569649 1217 ntAPPRIS ALT2 TSL 5 BASIC32.12■■■□□ 2.73
MSANTD3Q96H12 AC006077.2-201ENST00000623591 457 ntBASIC32.05■■■□□ 2.72
MSANTD3Q96H12 ZNRF2P1-201ENST00000441407 443 ntBASIC32.01■■■□□ 2.71
MSANTD3Q96H12 AC008738.5-201ENST00000587312 482 ntTSL 3 BASIC31.95■■■□□ 2.71
MSANTD3Q96H12 SATB1-AS1-216ENST00000598149 1119 ntTSL 2 BASIC31.88■■■□□ 2.69
MSANTD3Q96H12 SLC25A28-201ENST00000370495 1451 ntAPPRIS P1 TSL 1 (best) BASIC31.88■■■□□ 2.69
MSANTD3Q96H12 AC015813.7-201ENST00000623294 581 ntBASIC31.81■■■□□ 2.68
MSANTD3Q96H12 PRELID2-202ENST00000394450 1102 ntTSL 1 (best) BASIC31.66■■■□□ 2.66
MSANTD3Q96H12 CSNK1E-206ENST00000413574 1631 ntTSL 5 BASIC31.53■■■□□ 2.64
MSANTD3Q96H12 ARTN-201ENST00000372354 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC31.47■■■□□ 2.63
MSANTD3Q96H12 UBE2M-201ENST00000253023 1508 ntAPPRIS P1 TSL 1 (best) BASIC31.37■■■□□ 2.61
MSANTD3Q96H12 C11orf68-202ENST00000449692 1559 ntAPPRIS P3 TSL 1 (best) BASIC31.37■■■□□ 2.61
MSANTD3Q96H12 NKAIN4-203ENST00000370316 1430 ntAPPRIS P1 TSL 1 (best) BASIC31.33■■■□□ 2.61
MSANTD3Q96H12 NT5DC2-203ENST00000459839 1639 ntTSL 1 (best) BASIC31.33■■■□□ 2.61
MSANTD3Q96H12 NECTIN3-201ENST00000319792 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC31.21■■■□□ 2.59
MSANTD3Q96H12 FAM89B-202ENST00000449319 1337 ntTSL 1 (best) BASIC31.21■■■□□ 2.59
MSANTD3Q96H12 CAPNS1-206ENST00000588815 1471 ntAPPRIS P2 TSL 1 (best) BASIC31.21■■■□□ 2.59
MSANTD3Q96H12 AP002365.1-201ENST00000603448 772 ntBASIC31.19■■■□□ 2.58
MSANTD3Q96H12 HAGHL-201ENST00000341413 1701 ntTSL 2 BASIC31.15■■■□□ 2.58
MSANTD3Q96H12 CLEC3B-201ENST00000296130 936 ntAPPRIS P1 TSL 1 (best) BASIC31.07■■■□□ 2.56
MSANTD3Q96H12 SEPT3-204ENST00000406029 1866 ntTSL 5 BASIC31.01■■■□□ 2.56
MSANTD3Q96H12 SYNGR1-202ENST00000318801 1361 ntTSL 1 (best) BASIC30.94■■■□□ 2.54
MSANTD3Q96H12 AC079848.1-201ENST00000511301 327 ntTSL 3 BASIC30.93■■■□□ 2.54
MSANTD3Q96H12 H2AFV-202ENST00000308153 752 ntAPPRIS P4 TSL 1 (best) BASIC30.92■■■□□ 2.54
MSANTD3Q96H12 FAM58A-202ENST00000440428 1164 ntAPPRIS P2 TSL 2 BASIC30.89■■■□□ 2.54
MSANTD3Q96H12 FGF2-203ENST00000614010 867 ntTSL 1 (best) BASIC30.88■■■□□ 2.53
MSANTD3Q96H12 NT5M-207ENST00000616989 1635 ntTSL 1 (best) BASIC30.87■■■□□ 2.53
MSANTD3Q96H12 MBD2-202ENST00000398398 1237 ntTSL 2 BASIC30.87■■■□□ 2.53
MSANTD3Q96H12 MBD2-205ENST00000583046 1182 ntTSL 1 (best) BASIC30.87■■■□□ 2.53
MSANTD3Q96H12 HMGB1-205ENST00000399494 1282 ntAPPRIS P1 TSL 2 BASIC30.81■■■□□ 2.52
MSANTD3Q96H12 AC005524.1-203ENST00000586528 451 ntTSL 3 BASIC30.8■■■□□ 2.52
MSANTD3Q96H12 HOXB3-208ENST00000476342 1420 ntAPPRIS P1 TSL 1 (best) BASIC30.8■■■□□ 2.52
MSANTD3Q96H12 PQLC1-211ENST00000590381 1247 ntTSL 2 BASIC30.75■■■□□ 2.51
MSANTD3Q96H12 AL355297.4-201ENST00000603191 1249 ntTSL 3 BASIC30.74■■■□□ 2.51
MSANTD3Q96H12 ARTN-211ENST00000498139 1303 ntAPPRIS P4 TSL 1 (best) BASIC30.73■■■□□ 2.51
MSANTD3Q96H12 LINC01578-201ENST00000553829 732 ntTSL 2 BASIC30.7■■■□□ 2.51
MSANTD3Q96H12 METRNL-201ENST00000320095 1605 ntAPPRIS P1 TSL 1 (best) BASIC30.69■■■□□ 2.5
MSANTD3Q96H12 NRGN-201ENST00000284292 1306 ntAPPRIS P1 TSL 1 (best) BASIC30.65■■■□□ 2.5
MSANTD3Q96H12 NKX1-1-201ENST00000422806 1236 ntAPPRIS P1 TSL 5 BASIC30.63■■■□□ 2.49
MSANTD3Q96H12 CHCHD4-202ENST00000396914 1405 ntAPPRIS P1 TSL 1 (best) BASIC30.6■■■□□ 2.49
MSANTD3Q96H12 GSTZ1-201ENST00000216465 1338 ntAPPRIS P2 TSL 1 (best) BASIC30.56■■■□□ 2.48
MSANTD3Q96H12 MAP6D1-202ENST00000431348 890 ntAPPRIS ALT2 TSL 2 BASIC30.56■■■□□ 2.48
MSANTD3Q96H12 AGTRAP-204ENST00000376637 1067 ntTSL 2 BASIC30.54■■■□□ 2.48
MSANTD3Q96H12 LIMCH1-211ENST00000509638 1570 ntTSL 1 (best) BASIC30.54■■■□□ 2.48
MSANTD3Q96H12 RAN-202ENST00000392369 1530 ntAPPRIS P1 TSL 1 (best) BASIC30.52■■■□□ 2.48
MSANTD3Q96H12 AP001107.7-201ENST00000533287 272 ntTSL 2 BASIC30.51■■■□□ 2.47
MSANTD3Q96H12 AL136373.1-201ENST00000634804 1449 ntAPPRIS P1 BASIC30.5■■■□□ 2.47
MSANTD3Q96H12 CBX4-202ENST00000448310 718 ntAPPRIS ALT2 TSL 3 BASIC30.45■■■□□ 2.47
MSANTD3Q96H12 DYNLL1-207ENST00000549989 719 ntAPPRIS P1 TSL 1 (best) BASIC30.42■■■□□ 2.46
MSANTD3Q96H12 DYNLL1-208ENST00000550178 581 ntBASIC30.42■■■□□ 2.46
MSANTD3Q96H12 HRH3-201ENST00000317393 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC30.4■■■□□ 2.46
MSANTD3Q96H12 LINC01089-207ENST00000538335 630 ntTSL 3 BASIC30.37■■■□□ 2.45
MSANTD3Q96H12 NT5DC2-202ENST00000422318 1795 ntAPPRIS ALT2 TSL 5 BASIC30.36■■■□□ 2.45
MSANTD3Q96H12 MSANTD3-203ENST00000395067 1362 ntAPPRIS P1 TSL 1 (best) BASIC30.36■■■□□ 2.45
MSANTD3Q96H12 SAP30-201ENST00000296504 1108 ntAPPRIS P1 TSL 1 (best) BASIC30.35■■■□□ 2.45
MSANTD3Q96H12 CCM2-219ENST00000544363 1620 ntTSL 3 BASIC30.32■■■□□ 2.44
MSANTD3Q96H12 LINC01578-203ENST00000554669 578 ntTSL 5 BASIC30.31■■■□□ 2.44
MSANTD3Q96H12 ANAPC11-203ENST00000392376 687 ntAPPRIS P1 TSL 1 (best) BASIC30.27■■■□□ 2.44
MSANTD3Q96H12 FAM149A-215ENST00000514153 2070 ntAPPRIS P2 TSL 5 BASIC30.26■■■□□ 2.43
MSANTD3Q96H12 ECHS1-201ENST00000368547 1617 ntAPPRIS P1 TSL 1 (best) BASIC30.25■■■□□ 2.43
MSANTD3Q96H12 PLPP2-203ENST00000434325 1383 ntAPPRIS P1 TSL 1 (best) BASIC30.24■■■□□ 2.43
MSANTD3Q96H12 AL031258.1-201ENST00000623562 325 ntBASIC30.2■■■□□ 2.43
MSANTD3Q96H12 INAFM1-201ENST00000552360 1255 ntAPPRIS P1 BASIC30.19■■■□□ 2.42
MSANTD3Q96H12 CYHR1-209ENST00000530374 1870 ntTSL 3 BASIC30.18■■■□□ 2.42
MSANTD3Q96H12 MPND-207ENST00000599840 1611 ntAPPRIS ALT2 TSL 5 BASIC30.18■■■□□ 2.42
MSANTD3Q96H12 NRTN-201ENST00000303212 1109 ntAPPRIS P1 TSL 1 (best) BASIC30.17■■■□□ 2.42
MSANTD3Q96H12 ANKRD65-203ENST00000454272 1506 ntAPPRIS P1 TSL 5 BASIC30.16■■■□□ 2.42
MSANTD3Q96H12 DRD4-201ENST00000176183 1375 ntAPPRIS P1 TSL 1 (best) BASIC30.14■■■□□ 2.41
MSANTD3Q96H12 COPS6-201ENST00000303904 1432 ntAPPRIS P2 TSL 1 (best) BASIC30.11■■■□□ 2.41
Retrieved 100 of 98,524 protein–RNA pairs in 10.7 ms