Protein–RNA interactions for Protein: Q92499

DDX1, ATP-dependent RNA helicase DDX1, humanhuman

Known RBP Predictions only

Length 740 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX1Q92499 FBLL1-201ENST00000338333 1519 ntAPPRIS P1 BASIC36.16■■■■□ 3.38
DDX1Q92499 TCF15-201ENST00000246080 1555 ntAPPRIS P1 TSL 1 (best) BASIC36.02■■■■□ 3.36
DDX1Q92499 AL356512.1-201ENST00000607453 1739 ntBASIC35.43■■■■□ 3.26
DDX1Q92499 CSNK1E-204ENST00000403904 1580 ntAPPRIS P1 TSL 5 BASIC35.3■■■■□ 3.24
DDX1Q92499 HES6-203ENST00000409160 1600 ntTSL 2 BASIC35.13■■■■□ 3.21
DDX1Q92499 AES-202ENST00000327141 1608 ntAPPRIS P1 TSL 1 (best) BASIC34.99■■■■□ 3.19
DDX1Q92499 SEPT3-204ENST00000406029 1866 ntTSL 5 BASIC34.96■■■■□ 3.19
DDX1Q92499 PPP1CA-203ENST00000376745 1476 ntAPPRIS P1 TSL 1 (best) BASIC34.91■■■■□ 3.18
DDX1Q92499 PRR5-217ENST00000617066 1726 ntTSL 5 BASIC34.84■■■■□ 3.17
DDX1Q92499 PRR5-216ENST00000611394 1843 ntTSL 2 BASIC34.44■■■■□ 3.1
DDX1Q92499 PHF10-201ENST00000339209 1719 ntAPPRIS P4 TSL 1 (best) BASIC34.41■■■■□ 3.1
DDX1Q92499 SSSCA1-205ENST00000527920 806 ntTSL 3 BASIC34.29■■■■□ 3.08
DDX1Q92499 AC116565.1-201ENST00000610212 2421 ntAPPRIS P1 BASIC34.04■■■■□ 3.04
DDX1Q92499 PTF1A-201ENST00000376504 1537 ntAPPRIS P1 TSL 1 (best) BASIC33.98■■■■□ 3.03
DDX1Q92499 ZFYVE21-201ENST00000216602 1521 ntAPPRIS ALT2 TSL 2 BASIC33.79■■■■□ 3
DDX1Q92499 HRAS-203ENST00000397596 1100 ntAPPRIS P1 TSL 3 BASIC33.7■■■□□ 2.99
DDX1Q92499 NECTIN3-201ENST00000319792 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC33.53■■■□□ 2.96
DDX1Q92499 FAM149A-205ENST00000502970 1990 ntAPPRIS P2 TSL 5 BASIC33.5■■■□□ 2.95
DDX1Q92499 CYHR1-209ENST00000530374 1870 ntTSL 3 BASIC33.46■■■□□ 2.95
DDX1Q92499 RAB12-201ENST00000329286 2137 ntAPPRIS P1 TSL 1 (best) BASIC33.38■■■□□ 2.93
DDX1Q92499 OLFM1-208ENST00000392991 1057 ntTSL 2 BASIC33.36■■■□□ 2.93
DDX1Q92499 ZNF358-202ENST00000597229 1954 ntAPPRIS P1 TSL 2 BASIC33.21■■■□□ 2.91
DDX1Q92499 MPND-201ENST00000262966 1567 ntAPPRIS P3 TSL 1 (best) BASIC33.2■■■□□ 2.91
DDX1Q92499 GIPC1-205ENST00000586027 1386 ntAPPRIS P1 TSL 2 BASIC33.18■■■□□ 2.9
DDX1Q92499 CAPNS1-206ENST00000588815 1471 ntAPPRIS P2 TSL 1 (best) BASIC33.14■■■□□ 2.9
DDX1Q92499 TAF5L-202ENST00000366674 492 ntTSL 3 BASIC33.06■■■□□ 2.88
DDX1Q92499 ANKRD60-201ENST00000457363 1038 ntAPPRIS P1 TSL 5 BASIC33.02■■■□□ 2.88
DDX1Q92499 NT5DC2-203ENST00000459839 1639 ntTSL 1 (best) BASIC33■■■□□ 2.87
DDX1Q92499 PPP2CB-201ENST00000221138 2006 ntAPPRIS P1 TSL 1 (best) BASIC32.89■■■□□ 2.85
DDX1Q92499 MPND-207ENST00000599840 1611 ntAPPRIS ALT2 TSL 5 BASIC32.84■■■□□ 2.85
DDX1Q92499 SLC25A28-201ENST00000370495 1451 ntAPPRIS P1 TSL 1 (best) BASIC32.81■■■□□ 2.84
DDX1Q92499 TRIP10-202ENST00000313285 2035 ntAPPRIS P1 TSL 1 (best) BASIC32.79■■■□□ 2.84
DDX1Q92499 FAM149A-215ENST00000514153 2070 ntAPPRIS P2 TSL 5 BASIC32.7■■■□□ 2.83
DDX1Q92499 CACNG8-202ENST00000638874 1278 ntAPPRIS P2 TSL 1 (best) BASIC32.7■■■□□ 2.83
DDX1Q92499 PPP2CB-204ENST00000518564 691 ntTSL 3 BASIC32.66■■■□□ 2.82
DDX1Q92499 FOXD1-202ENST00000615637 2272 ntAPPRIS P1 BASIC32.61■■■□□ 2.81
DDX1Q92499 ACOT7-209ENST00000545482 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC32.61■■■□□ 2.81
DDX1Q92499 CCM2-219ENST00000544363 1620 ntTSL 3 BASIC32.57■■■□□ 2.8
DDX1Q92499 TGIF1-202ENST00000343820 2076 ntAPPRIS P1 TSL 1 (best) BASIC32.52■■■□□ 2.8
DDX1Q92499 METRNL-201ENST00000320095 1605 ntAPPRIS P1 TSL 1 (best) BASIC32.51■■■□□ 2.8
DDX1Q92499 CDV3-203ENST00000431519 955 ntTSL 1 (best) BASIC32.47■■■□□ 2.79
DDX1Q92499 ALYREF-202ENST00000505490 1088 ntAPPRIS P1 TSL 1 (best) BASIC32.37■■■□□ 2.77
DDX1Q92499 UBE2M-201ENST00000253023 1508 ntAPPRIS P1 TSL 1 (best) BASIC32.36■■■□□ 2.77
DDX1Q92499 CSNK1E-206ENST00000413574 1631 ntTSL 5 BASIC32.34■■■□□ 2.77
DDX1Q92499 KHSRP-213ENST00000619396 2226 ntAPPRIS ALT2 TSL 5 BASIC32.18■■■□□ 2.74
DDX1Q92499 PWWP2B-202ENST00000631148 2013 ntTSL 5 BASIC32.09■■■□□ 2.73
DDX1Q92499 NT5DC2-202ENST00000422318 1795 ntAPPRIS ALT2 TSL 5 BASIC32.08■■■□□ 2.73
DDX1Q92499 C11orf63-202ENST00000307257 1964 ntTSL 2 BASIC32.06■■■□□ 2.72
DDX1Q92499 GALR3-201ENST00000249041 1157 ntAPPRIS P1 TSL 1 (best) BASIC32.02■■■□□ 2.72
DDX1Q92499 NKAIN4-203ENST00000370316 1430 ntAPPRIS P1 TSL 1 (best) BASIC31.98■■■□□ 2.71
DDX1Q92499 PABPN1-201ENST00000216727 2001 ntAPPRIS P2 TSL 1 (best) BASIC31.94■■■□□ 2.7
DDX1Q92499 B4GALT2-203ENST00000372324 2203 ntAPPRIS P1 TSL 1 (best) BASIC31.94■■■□□ 2.7
DDX1Q92499 CMTM4-202ENST00000394106 1187 ntAPPRIS P1 TSL 1 (best) BASIC31.94■■■□□ 2.7
DDX1Q92499 CMTM4-204ENST00000563952 1023 ntTSL 1 (best) BASIC31.94■■■□□ 2.7
DDX1Q92499 C11orf68-202ENST00000449692 1559 ntAPPRIS P3 TSL 1 (best) BASIC31.92■■■□□ 2.7
DDX1Q92499 INO80B-201ENST00000233331 1261 ntAPPRIS P1 TSL 1 (best) BASIC31.91■■■□□ 2.7
DDX1Q92499 INO80B-WBP1-202ENST00000452361 2040 ntAPPRIS P5 TSL 2 BASIC31.87■■■□□ 2.69
DDX1Q92499 MAPK3-201ENST00000263025 1861 ntAPPRIS P3 TSL 1 (best) BASIC31.82■■■□□ 2.69
DDX1Q92499 ILK-212ENST00000532063 1617 ntTSL 2 BASIC31.82■■■□□ 2.69
DDX1Q92499 HAPLN2-201ENST00000255039 1771 ntAPPRIS P1 TSL 1 (best) BASIC31.79■■■□□ 2.68
DDX1Q92499 INO80B-203ENST00000409917 796 ntTSL 2 BASIC31.77■■■□□ 2.68
DDX1Q92499 FAM89B-203ENST00000530349 1263 ntAPPRIS P1 TSL 2 BASIC31.76■■■□□ 2.67
DDX1Q92499 MAF-203ENST00000569649 1217 ntAPPRIS ALT2 TSL 5 BASIC31.73■■■□□ 2.67
DDX1Q92499 AL357033.3-201ENST00000620143 614 ntTSL 3 BASIC31.73■■■□□ 2.67
DDX1Q92499 NT5M-207ENST00000616989 1635 ntTSL 1 (best) BASIC31.64■■■□□ 2.66
DDX1Q92499 CRIP2-201ENST00000329146 1857 ntAPPRIS P1 TSL 1 (best) BASIC31.61■■■□□ 2.65
DDX1Q92499 CYBA-201ENST00000261623 797 ntAPPRIS P1 TSL 1 (best) BASIC31.59■■■□□ 2.65
DDX1Q92499 MAPK3-202ENST00000322266 1743 ntTSL 5 BASIC31.58■■■□□ 2.65
DDX1Q92499 RAN-202ENST00000392369 1530 ntAPPRIS P1 TSL 1 (best) BASIC31.54■■■□□ 2.64
DDX1Q92499 FEZF2-203ENST00000486811 2001 ntAPPRIS P1 TSL 5 BASIC31.54■■■□□ 2.64
DDX1Q92499 LMO2-202ENST00000395833 1687 ntAPPRIS P1 TSL 1 (best) BASIC31.52■■■□□ 2.64
DDX1Q92499 AC015813.7-201ENST00000623294 581 ntBASIC31.48■■■□□ 2.63
DDX1Q92499 C11orf84-201ENST00000294244 2024 ntAPPRIS P1 TSL 1 (best) BASIC31.46■■■□□ 2.63
DDX1Q92499 SLC25A10-203ENST00000545862 1911 ntTSL 1 (best) BASIC31.41■■■□□ 2.62
DDX1Q92499 KIAA2013-203ENST00000616327 2170 ntAPPRIS P1 TSL 5 BASIC31.39■■■□□ 2.61
DDX1Q92499 ZNRF2P1-201ENST00000441407 443 ntBASIC31.35■■■□□ 2.61
DDX1Q92499 ECHS1-201ENST00000368547 1617 ntAPPRIS P1 TSL 1 (best) BASIC31.33■■■□□ 2.61
DDX1Q92499 LIMCH1-211ENST00000509638 1570 ntTSL 1 (best) BASIC31.32■■■□□ 2.6
DDX1Q92499 AC006077.2-201ENST00000623591 457 ntBASIC31.31■■■□□ 2.6
DDX1Q92499 HAGHL-201ENST00000341413 1701 ntTSL 2 BASIC31.26■■■□□ 2.59
DDX1Q92499 CTDNEP1-208ENST00000573600 1724 ntAPPRIS P1 TSL 5 BASIC31.24■■■□□ 2.59
DDX1Q92499 AGAP1-204ENST00000409457 2165 ntTSL 1 (best) BASIC31.2■■■□□ 2.58
DDX1Q92499 AL136373.1-201ENST00000634804 1449 ntAPPRIS P1 BASIC31.17■■■□□ 2.58
DDX1Q92499 CSNK1E-205ENST00000405675 2127 ntTSL 5 BASIC31.15■■■□□ 2.58
DDX1Q92499 Z97634.1-201ENST00000412293 1715 ntTSL 1 (best) BASIC31.12■■■□□ 2.57
DDX1Q92499 TPRG1L-201ENST00000344579 2189 ntTSL 1 (best) BASIC31.12■■■□□ 2.57
DDX1Q92499 HOXB3-208ENST00000476342 1420 ntAPPRIS P1 TSL 1 (best) BASIC31.1■■■□□ 2.57
DDX1Q92499 SSBP3-204ENST00000371320 2077 ntAPPRIS P3 TSL 1 (best) BASIC31.09■■■□□ 2.57
DDX1Q92499 AC008738.5-201ENST00000587312 482 ntTSL 3 BASIC31.06■■■□□ 2.56
DDX1Q92499 GRASP-206ENST00000552049 1688 ntTSL 1 (best) BASIC31.01■■■□□ 2.55
DDX1Q92499 AC145285.7-201ENST00000614819 1539 ntBASIC31.01■■■□□ 2.55
DDX1Q92499 SATB1-AS1-216ENST00000598149 1119 ntTSL 2 BASIC30.98■■■□□ 2.55
DDX1Q92499 ARTN-201ENST00000372354 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC30.97■■■□□ 2.55
DDX1Q92499 FAM19A5-203ENST00000402357 1508 ntTSL 1 (best) BASIC30.94■■■□□ 2.54
DDX1Q92499 PRELID2-202ENST00000394450 1102 ntTSL 1 (best) BASIC30.94■■■□□ 2.54
DDX1Q92499 FAM89B-202ENST00000449319 1337 ntTSL 1 (best) BASIC30.93■■■□□ 2.54
DDX1Q92499 NT5M-201ENST00000389022 1617 ntAPPRIS P1 TSL 1 (best) BASIC30.89■■■□□ 2.54
DDX1Q92499 DRD4-201ENST00000176183 1375 ntAPPRIS P1 TSL 1 (best) BASIC30.86■■■□□ 2.53
DDX1Q92499 CHCHD4-202ENST00000396914 1405 ntAPPRIS P1 TSL 1 (best) BASIC30.86■■■□□ 2.53
DDX1Q92499 RAB43-207ENST00000476465 1627 ntTSL 3 BASIC30.84■■■□□ 2.53
Retrieved 100 of 98,524 protein–RNA pairs in 15.2 ms