Protein–RNA interactions for Protein: Q8IYR6

TMEFF1, Tomoregulin-1, humanhuman

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEFF1Q8IYR6 FBLL1-201ENST00000338333 1519 ntAPPRIS P1 BASIC34.57■■■■□ 3.12
TMEFF1Q8IYR6 SSSCA1-205ENST00000527920 806 ntTSL 3 BASIC34.19■■■■□ 3.06
TMEFF1Q8IYR6 HRAS-203ENST00000397596 1100 ntAPPRIS P1 TSL 3 BASIC33.73■■■□□ 2.99
TMEFF1Q8IYR6 PPP1CA-203ENST00000376745 1476 ntAPPRIS P1 TSL 1 (best) BASIC33.66■■■□□ 2.98
TMEFF1Q8IYR6 AES-202ENST00000327141 1608 ntAPPRIS P1 TSL 1 (best) BASIC33.43■■■□□ 2.94
TMEFF1Q8IYR6 CSNK1E-204ENST00000403904 1580 ntAPPRIS P1 TSL 5 BASIC33.25■■■□□ 2.91
TMEFF1Q8IYR6 TCF15-201ENST00000246080 1555 ntAPPRIS P1 TSL 1 (best) BASIC33.09■■■□□ 2.89
TMEFF1Q8IYR6 AL356512.1-201ENST00000607453 1739 ntBASIC32.98■■■□□ 2.87
TMEFF1Q8IYR6 ANKRD60-201ENST00000457363 1038 ntAPPRIS P1 TSL 5 BASIC32.8■■■□□ 2.84
TMEFF1Q8IYR6 PPP2CB-204ENST00000518564 691 ntTSL 3 BASIC32.66■■■□□ 2.82
TMEFF1Q8IYR6 CACNG8-202ENST00000638874 1278 ntAPPRIS P2 TSL 1 (best) BASIC32.53■■■□□ 2.8
TMEFF1Q8IYR6 OLFM1-208ENST00000392991 1057 ntTSL 2 BASIC32.49■■■□□ 2.79
TMEFF1Q8IYR6 TAF5L-202ENST00000366674 492 ntTSL 3 BASIC32.48■■■□□ 2.79
TMEFF1Q8IYR6 CDV3-203ENST00000431519 955 ntTSL 1 (best) BASIC32.46■■■□□ 2.79
TMEFF1Q8IYR6 ZFYVE21-201ENST00000216602 1521 ntAPPRIS ALT2 TSL 2 BASIC32.24■■■□□ 2.75
TMEFF1Q8IYR6 PHF10-201ENST00000339209 1719 ntAPPRIS P4 TSL 1 (best) BASIC32.21■■■□□ 2.75
TMEFF1Q8IYR6 MPND-201ENST00000262966 1567 ntAPPRIS P3 TSL 1 (best) BASIC32.13■■■□□ 2.73
TMEFF1Q8IYR6 GALR3-201ENST00000249041 1157 ntAPPRIS P1 TSL 1 (best) BASIC32.09■■■□□ 2.73
TMEFF1Q8IYR6 ALYREF-202ENST00000505490 1088 ntAPPRIS P1 TSL 1 (best) BASIC31.94■■■□□ 2.7
TMEFF1Q8IYR6 CMTM4-202ENST00000394106 1187 ntAPPRIS P1 TSL 1 (best) BASIC31.78■■■□□ 2.68
TMEFF1Q8IYR6 CMTM4-204ENST00000563952 1023 ntTSL 1 (best) BASIC31.78■■■□□ 2.68
TMEFF1Q8IYR6 HES6-203ENST00000409160 1600 ntTSL 2 BASIC31.75■■■□□ 2.67
TMEFF1Q8IYR6 AL357033.3-201ENST00000620143 614 ntTSL 3 BASIC31.71■■■□□ 2.67
TMEFF1Q8IYR6 FAM89B-203ENST00000530349 1263 ntAPPRIS P1 TSL 2 BASIC31.67■■■□□ 2.66
TMEFF1Q8IYR6 GIPC1-205ENST00000586027 1386 ntAPPRIS P1 TSL 2 BASIC31.65■■■□□ 2.66
TMEFF1Q8IYR6 INO80B-201ENST00000233331 1261 ntAPPRIS P1 TSL 1 (best) BASIC31.62■■■□□ 2.65
TMEFF1Q8IYR6 PRR5-217ENST00000617066 1726 ntTSL 5 BASIC31.54■■■□□ 2.64
TMEFF1Q8IYR6 INO80B-203ENST00000409917 796 ntTSL 2 BASIC31.53■■■□□ 2.64
TMEFF1Q8IYR6 PTF1A-201ENST00000376504 1537 ntAPPRIS P1 TSL 1 (best) BASIC31.49■■■□□ 2.63
TMEFF1Q8IYR6 CYBA-201ENST00000261623 797 ntAPPRIS P1 TSL 1 (best) BASIC31.48■■■□□ 2.63
TMEFF1Q8IYR6 PRR5-216ENST00000611394 1843 ntTSL 2 BASIC31.41■■■□□ 2.62
TMEFF1Q8IYR6 MAF-203ENST00000569649 1217 ntAPPRIS ALT2 TSL 5 BASIC31.39■■■□□ 2.62
TMEFF1Q8IYR6 ZNRF2P1-201ENST00000441407 443 ntBASIC31.13■■■□□ 2.57
TMEFF1Q8IYR6 AC008738.5-201ENST00000587312 482 ntTSL 3 BASIC31.13■■■□□ 2.57
TMEFF1Q8IYR6 AC006077.2-201ENST00000623591 457 ntBASIC31.13■■■□□ 2.57
TMEFF1Q8IYR6 SLC25A28-201ENST00000370495 1451 ntAPPRIS P1 TSL 1 (best) BASIC31.05■■■□□ 2.56
TMEFF1Q8IYR6 SATB1-AS1-216ENST00000598149 1119 ntTSL 2 BASIC31.01■■■□□ 2.55
TMEFF1Q8IYR6 AC015813.7-201ENST00000623294 581 ntBASIC31.01■■■□□ 2.55
TMEFF1Q8IYR6 ARTN-201ENST00000372354 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC30.91■■■□□ 2.54
TMEFF1Q8IYR6 PRELID2-202ENST00000394450 1102 ntTSL 1 (best) BASIC30.84■■■□□ 2.53
TMEFF1Q8IYR6 CSNK1E-206ENST00000413574 1631 ntTSL 5 BASIC30.8■■■□□ 2.52
TMEFF1Q8IYR6 NT5DC2-203ENST00000459839 1639 ntTSL 1 (best) BASIC30.6■■■□□ 2.49
TMEFF1Q8IYR6 UBE2M-201ENST00000253023 1508 ntAPPRIS P1 TSL 1 (best) BASIC30.57■■■□□ 2.48
TMEFF1Q8IYR6 FAM89B-202ENST00000449319 1337 ntTSL 1 (best) BASIC30.56■■■□□ 2.48
TMEFF1Q8IYR6 C11orf68-202ENST00000449692 1559 ntAPPRIS P3 TSL 1 (best) BASIC30.54■■■□□ 2.48
TMEFF1Q8IYR6 SEPT3-204ENST00000406029 1866 ntTSL 5 BASIC30.48■■■□□ 2.47
TMEFF1Q8IYR6 NKAIN4-203ENST00000370316 1430 ntAPPRIS P1 TSL 1 (best) BASIC30.46■■■□□ 2.47
TMEFF1Q8IYR6 HAGHL-201ENST00000341413 1701 ntTSL 2 BASIC30.4■■■□□ 2.46
TMEFF1Q8IYR6 AP002365.1-201ENST00000603448 772 ntBASIC30.38■■■□□ 2.45
TMEFF1Q8IYR6 NECTIN3-201ENST00000319792 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC30.32■■■□□ 2.44
TMEFF1Q8IYR6 CAPNS1-206ENST00000588815 1471 ntAPPRIS P2 TSL 1 (best) BASIC30.2■■■□□ 2.43
TMEFF1Q8IYR6 CLEC3B-201ENST00000296130 936 ntAPPRIS P1 TSL 1 (best) BASIC30.19■■■□□ 2.42
TMEFF1Q8IYR6 MBD2-202ENST00000398398 1237 ntTSL 2 BASIC30.18■■■□□ 2.42
TMEFF1Q8IYR6 MBD2-205ENST00000583046 1182 ntTSL 1 (best) BASIC30.18■■■□□ 2.42
TMEFF1Q8IYR6 FAM58A-202ENST00000440428 1164 ntAPPRIS P2 TSL 2 BASIC30.17■■■□□ 2.42
TMEFF1Q8IYR6 H2AFV-202ENST00000308153 752 ntAPPRIS P4 TSL 1 (best) BASIC30.16■■■□□ 2.42
TMEFF1Q8IYR6 AC079848.1-201ENST00000511301 327 ntTSL 3 BASIC30.14■■■□□ 2.42
TMEFF1Q8IYR6 HMGB1-205ENST00000399494 1282 ntAPPRIS P1 TSL 2 BASIC30.12■■■□□ 2.41
TMEFF1Q8IYR6 FGF2-203ENST00000614010 867 ntTSL 1 (best) BASIC30.12■■■□□ 2.41
TMEFF1Q8IYR6 PQLC1-211ENST00000590381 1247 ntTSL 2 BASIC30.09■■■□□ 2.41
TMEFF1Q8IYR6 SYNGR1-202ENST00000318801 1361 ntTSL 1 (best) BASIC30.07■■■□□ 2.4
TMEFF1Q8IYR6 ARTN-211ENST00000498139 1303 ntAPPRIS P4 TSL 1 (best) BASIC30.04■■■□□ 2.4
TMEFF1Q8IYR6 AL355297.4-201ENST00000603191 1249 ntTSL 3 BASIC29.99■■■□□ 2.39
TMEFF1Q8IYR6 AC005524.1-203ENST00000586528 451 ntTSL 3 BASIC29.98■■■□□ 2.39
TMEFF1Q8IYR6 NT5M-207ENST00000616989 1635 ntTSL 1 (best) BASIC29.97■■■□□ 2.39
TMEFF1Q8IYR6 HOXB3-208ENST00000476342 1420 ntAPPRIS P1 TSL 1 (best) BASIC29.9■■■□□ 2.38
TMEFF1Q8IYR6 METRNL-201ENST00000320095 1605 ntAPPRIS P1 TSL 1 (best) BASIC29.89■■■□□ 2.37
TMEFF1Q8IYR6 NKX1-1-201ENST00000422806 1236 ntAPPRIS P1 TSL 5 BASIC29.88■■■□□ 2.37
TMEFF1Q8IYR6 LINC01578-201ENST00000553829 732 ntTSL 2 BASIC29.88■■■□□ 2.37
TMEFF1Q8IYR6 MAP6D1-202ENST00000431348 890 ntAPPRIS ALT2 TSL 2 BASIC29.85■■■□□ 2.37
TMEFF1Q8IYR6 NRGN-201ENST00000284292 1306 ntAPPRIS P1 TSL 1 (best) BASIC29.84■■■□□ 2.37
TMEFF1Q8IYR6 CHCHD4-202ENST00000396914 1405 ntAPPRIS P1 TSL 1 (best) BASIC29.84■■■□□ 2.37
TMEFF1Q8IYR6 CBX4-202ENST00000448310 718 ntAPPRIS ALT2 TSL 3 BASIC29.82■■■□□ 2.36
TMEFF1Q8IYR6 AP001107.7-201ENST00000533287 272 ntTSL 2 BASIC29.78■■■□□ 2.36
TMEFF1Q8IYR6 RAN-202ENST00000392369 1530 ntAPPRIS P1 TSL 1 (best) BASIC29.77■■■□□ 2.36
TMEFF1Q8IYR6 AL136373.1-201ENST00000634804 1449 ntAPPRIS P1 BASIC29.76■■■□□ 2.35
TMEFF1Q8IYR6 HRH3-201ENST00000317393 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC29.74■■■□□ 2.35
TMEFF1Q8IYR6 DYNLL1-207ENST00000549989 719 ntAPPRIS P1 TSL 1 (best) BASIC29.72■■■□□ 2.35
TMEFF1Q8IYR6 DYNLL1-208ENST00000550178 581 ntBASIC29.72■■■□□ 2.35
TMEFF1Q8IYR6 LIMCH1-211ENST00000509638 1570 ntTSL 1 (best) BASIC29.72■■■□□ 2.35
TMEFF1Q8IYR6 MSANTD3-203ENST00000395067 1362 ntAPPRIS P1 TSL 1 (best) BASIC29.69■■■□□ 2.34
TMEFF1Q8IYR6 FAM149A-215ENST00000514153 2070 ntAPPRIS P2 TSL 5 BASIC29.69■■■□□ 2.34
TMEFF1Q8IYR6 AGTRAP-204ENST00000376637 1067 ntTSL 2 BASIC29.69■■■□□ 2.34
TMEFF1Q8IYR6 GSTZ1-201ENST00000216465 1338 ntAPPRIS P2 TSL 1 (best) BASIC29.69■■■□□ 2.34
TMEFF1Q8IYR6 LINC01578-203ENST00000554669 578 ntTSL 5 BASIC29.6■■■□□ 2.33
TMEFF1Q8IYR6 SAP30-201ENST00000296504 1108 ntAPPRIS P1 TSL 1 (best) BASIC29.58■■■□□ 2.33
TMEFF1Q8IYR6 NT5DC2-202ENST00000422318 1795 ntAPPRIS ALT2 TSL 5 BASIC29.58■■■□□ 2.33
TMEFF1Q8IYR6 CCM2-219ENST00000544363 1620 ntTSL 3 BASIC29.53■■■□□ 2.32
TMEFF1Q8IYR6 INAFM1-201ENST00000552360 1255 ntAPPRIS P1 BASIC29.53■■■□□ 2.32
TMEFF1Q8IYR6 CYHR1-209ENST00000530374 1870 ntTSL 3 BASIC29.51■■■□□ 2.31
TMEFF1Q8IYR6 ANAPC11-203ENST00000392376 687 ntAPPRIS P1 TSL 1 (best) BASIC29.51■■■□□ 2.31
TMEFF1Q8IYR6 LINC01089-207ENST00000538335 630 ntTSL 3 BASIC29.49■■■□□ 2.31
TMEFF1Q8IYR6 PWWP2B-202ENST00000631148 2013 ntTSL 5 BASIC29.49■■■□□ 2.31
TMEFF1Q8IYR6 ECHS1-201ENST00000368547 1617 ntAPPRIS P1 TSL 1 (best) BASIC29.48■■■□□ 2.31
TMEFF1Q8IYR6 AL031258.1-201ENST00000623562 325 ntBASIC29.47■■■□□ 2.31
TMEFF1Q8IYR6 AC116565.1-201ENST00000610212 2421 ntAPPRIS P1 BASIC29.43■■■□□ 2.3
TMEFF1Q8IYR6 ARTN-204ENST00000438616 889 ntTSL 1 (best) BASIC29.43■■■□□ 2.3
TMEFF1Q8IYR6 PLPP2-203ENST00000434325 1383 ntAPPRIS P1 TSL 1 (best) BASIC29.42■■■□□ 2.3
TMEFF1Q8IYR6 ANKRD65-203ENST00000454272 1506 ntAPPRIS P1 TSL 5 BASIC29.4■■■□□ 2.3
TMEFF1Q8IYR6 FAM149A-205ENST00000502970 1990 ntAPPRIS P2 TSL 5 BASIC29.36■■■□□ 2.29
Retrieved 100 of 98,524 protein–RNA pairs in 14.4 ms